Salvelinus namaycush (lake trout): 120053699
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Entry
120053699 CDS
T07522
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120053699 (trmt13)
Enzymes [BR:
snh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
120053699 (trmt13)
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120053699 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
120053699
NCBI-ProteinID:
XP_038856822
UniProt:
A0A8U1BPC3
LinkDB
All DBs
Position
9:13908803..13920585
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AA seq
468 aa
AA seq
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MELPTADGVSAPLPGRCAFYVEKKKRFCKMIVGSGKAYCGEHANAEKDCEKKRIACPLDP
KHTVFEDLLAKHLKKCNSREKPKPLFYVQDINAGPAIVEDTPKDEVPLSDRSKAELNLLI
KKLKTAVKGLKCKHEENIQSHPALHEALNDPKNGDSAFKHLKQQASLLGNMEDLHLLGPN
RCFVEFGAGKGKLSHWIHVALKAYDDIHFLLVERSSARFKVDGKHQNSDTKFERLQVDIQ
HLDLRKVPLLQEKGLPVVGVGKHLCGAATDLALQCLLGSSETAPHGIEDQPPSKRSKLQQ
QPGESTGPELQPIPRAAGETAAGQELRVGGVAIALCCHHRCDWRHYVGKEFFKEKGLGAS
EFAAFLRMSSWATCGSRQARQTSPPQDQTDQTFEEEEHEATEEAELDSLEGVLNAEDREH
IGRLCKLLIDQGRVHFLQQKGFDSRLLYYTSSDVSLENVLLTALPTSR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggagctccccaccgcggacggcgtgtctgcacctctgcctggaagatgtgctttttac
gtggaaaagaaaaaacgattctgcaaaatgatagttggaagtggaaaagcatattgtggg
gaacatgctaatgcggaaaaggactgtgagaaaaaaagaatagcatgtcctctggatcca
aaacacactgtattcgaagaccttttagcaaaacatctgaagaagtgcaactccagagag
aaacccaaacctctgttctatgtgcaagatattaatgctggaccagccattgttgaggac
acccccaaagatgaggtacctttatcagatcgcagcaaagcagagttgaacctgctcata
aaaaaactgaagactgccgtcaaagggctcaaatgcaaacatgaagaaaatatacaatct
caccctgctctccatgaagctttgaatgatccaaagaatggggactctgcgttcaaacac
ctgaagcaacaggcgtcccttttaggaaacatggaggatttgcacctgcttggacctaac
aggtgttttgttgagtttggtgcagggaaaggcaagctttcccactggatccatgtcgct
ctgaaagcctatgacgacatccatttcctgcttgtggaaagatcaagcgctcgttttaaa
gtagatggcaaacaccaaaattctgataccaaatttgaaagactacaagtggatattcag
caccttgatttgcgtaaagttcctctcctccaagaaaagggacttccagtggttggagtg
ggcaaacacttgtgtggcgcagcaacagaccttgctcttcaatgcctactgggcagctcg
gagactgcgccccatgggatcgaagatcagccacccagcaagcgctcaaagctccagcag
cagcctggagagtctacaggaccggagctacagcccattcccagggcggcaggggagact
gctgccggccaggagctgagggtaggtggggtggccatcgccttgtgctgccaccaccgc
tgtgactggaggcattatgtaggcaaggagttcttcaaggagaaaggactaggtgcctct
gagttcgctgccttcctgcgcatgtcaagttgggcgacctgtggctcgagacaagcaaga
cagacctctccaccacaagatcaaactgaccaaacgtttgaggaagaggagcacgaagcg
acagaagaggctgaactagacagcttggaaggagtgttgaatgctgaggaccgtgaacac
ataggacgcctgtgcaagctgctgattgaccagggcagggttcacttcctgcagcagaag
ggatttgactcccgcctactctactacaccagctcagacgtttctctagaaaacgtgttg
ctaactgcacttcccacctcgcggtga
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