Salvelinus namaycush (lake trout): 120053708 Help Entry 120053708         CDS       T07522                                  Name (RefSeq) roquin-1-like   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism snh  Salvelinus namaycush (lake trout) Brite KEGG Orthology (KO) [BR:snh00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:snh03000]     120053708    04121 Ubiquitin system [BR:snh04121]     120053708 Transcription factors [BR:snh03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     120053708 Ubiquitin system [BR:snh04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     120053708 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK Prok-RING_4 zf_CCCH_4 zf-RING_6 FYVE Motif Other DBs NCBI-GeneID:  120053708 NCBI-ProteinID:  XP_038856835 UniProt:  A0A8U1BZA8 LinkDB All DBs Position 9:complement(14223976..14253803) Genome browser AA seq 1054 aa AA seqDB search MPVQAPQWTEFLLCPICTQLFEESLRKPISLGCGHTVCKMCLNKLHRKACPFDQTAIATD IELLPVNTALLQLVGGQVPKRQSTTLVTGAEDIAHYEEASECVEELAQYLKPLSNSRGVG LSTSSAQSSLSRPMQRKLVTLVHCQLVEEEGRVRATRAARSLGERTVTELILQHQNPQQL SSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASK TSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEDFWTYEALRREHDSQIVQIAMEGGLRIA PDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLEL LANIDPSPDSPPPTWELLDTGLVAVKTVVHGLVDFIQNHSKKGSDPQQPPQHSKYKTYMC RDMKQKGGCPRGTSCTFAHSQDELEKYRKMNKRLAARRPLSLSLTQLNEVGLLPEEVGML EGLAHKGLTNGMVASVTGSALPQLISRGADPSYEPMMRKPQSQGSLSAPSSPPDLLDPVP NRAMAHPRMAVDHLAMHKQMPRRPSMYPPQQGELFYPPEPRAPPSALQYEASQNAPGNPP YPYQPSQYPPQPRYVRNPPPTNDPALPPYPGTYPQERQCPPQPSSSHFSNANPQGFAPPP HYDGRRHPAYPPPPPHSYPHREDPSMPADEASRERYLPEGYHPSGPHPSHMRPYTPRESY NRPQPTPSLDYLHRRRQEIMAQLEDGKQVTPPPFAPSPTLPHHYESNYTQEQQQYLENSQ AFSKYREPDYASQYSPWSCDTIGSYIGSKEGKSRDSMERMNAEGKGVEGRRRAAEARDDD PIIPFGSLPTVSRFGVISRTPKTGYLTAGPGQAMTLSQGTNGPKHGAATGWGAAGYSQPP QAHLSERPVKEREQLTMELQQVNQQINKQTAQADHPSPEEWSSGSVSSQQLSLELHHVER EIGKRTRQIALEHLVSHDGSGAYKLKPTENGQRAEHSLVLSEGCNGPSGVLQDGSVSSGG LSCLTSKTSSLSLSADPIAGGTDRKTNGVVHLCS NT seq 3165 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaagcgccgcaatggacggaattcctgctgtgtcccatctgcacccagctg ttcgaggagagcctccgcaagcccatcagcctgggctgcggccacaccgtctgcaagatg tgcctgaacaagctgcatcgcaaggcctgccccttcgaccagacggctatcgccaccgac attgagttgctgccagtcaacacagccctgctgcagctggtgggaggacaggtgcccaaa cggcagtctaccaccttggtgacaggggcagaggacatagcccactatgaggaagccagt gagtgtgtggaggagctggctcagtacctgaaacccctgagcaacagcagaggtgtgggg ttgagcaccagcagcgcccagagttctctgagtcggcccatgcagaggaagctggtgacc ctggtgcactgtcagctggtggaggaggagggccgggtgagggccacgcgggcggccagg tctctgggggagcgcaccgtcactgagctcattctgcagcaccagaacccccagcagctc tcctccaacctgtgggctgcagtcagggcaaggggctgccagtttctcggcccagcgatg caggaggaggctctgaagctggtgcttttggctctggaggacggctccgctctatccagg aaggtcctggtgctgtttgtggttcagaggttagagccacgtttcccccaggcctccaag accagcataggccacgtggtgcagctcctctacagggcctcctgcttcaaggtgaccaag cgtgatgaggactcgtccctgatgcagttgaaggaggacttctggacgtacgaggcgctg cggcgcgaacacgactcccagatcgtccagatcgcaatggaggggggcctccgcatcgcc cctgaccagtggtcttccctgctctacggggaccagtcgcacaagtcccacatgcagtcc atcattgacaagttgcagacgccagcgtcgtttgctcagagtgttcaggagctgaccatc gccctgcagaggacaggtgacccggccaacctgaaccgcctgcgaccacacctggagctg ctagccaacatcgacccaagtccagactcccctccccccacgtgggagctgctggacacg ggcttggtggcagtgaagactgtggtacacggcctggtggacttcatccagaaccacagc aagaaggggagtgacccacaacagccaccccagcacagtaaatacaagacgtacatgtgt cgggacatgaagcagaaggggggctgtcctcgaggaaccagctgcaccttcgctcactct caggacgagctagagaagtaccgtaagatgaacaagcgtctggctgcccgccggcccctc agcctatccctgacgcagctgaacgaggttggcctattgcccgaggaggtggggatgctg gaggggctggcacataagggcttgacgaatggcatggtggcgtcggtcacaggctccgcc ctgccccagctcatctcccgcggtgccgacccctcctacgagccgatgatgcggaagccc cagtcccagggaagcctcagtgcccccagctctcctccagacttactggaccctgtgccc aatcgggccatggcccaccccaggatggcagtggaccacctggccatgcacaagcagatg cccaggaggccctccatgtacccccctcagcagggagaactcttctacccccctgagccc agggcacctccatcagccctgcagtatgaggcctcccagaacgccccaggtaaccccccc tacccctaccagccctctcagtacccaccccagcctcgctacgtccggaacccccctccc accaacgacccggccttgcccccctaccccggcacctacccccaggagcgccagtgtccc cctcagccctcgagttcccacttctccaatgccaacccccaagggtttgcgcctcctccg cattatgacggccgtcgacaccccgcctacccccctccaccaccacactcctatccccac cgggaggacccctccatgcctgcggacgaggcctccagagaaagataccttcctgagggt taccacccctctggcccccaccccagccacatgaggccctacacccccagggagtcttac aaccggccccagcccactcccagtctggactacttgcaccgccgacgccaggagatcatg gcccagctggaagacgggaagcaggtcactcccccacccttcgccccctcgcctactctg ccacaccactacgagtccaactacacacaggagcaacagcagtacttggaaaactcacaa gcgttttcaaagtaccgcgagccagactacgctagccagtactctccttggtcatgtgac actatcggctcctacattggcagcaaggaggggaagtccagagacagtatggagaggatg aacgctgaggggaaaggtgtggaaggcaggcgcagggctgccgaggccagagatgacgac cctatcatccccttcggctctctgcccaccgtgtcacgcttcggggtgatctcccgcacc cccaagacgggctacttgactgccgggccagggcaggccatgaccctctcacaggggacc aatggccccaaacacggcgctgcaacagggtggggtgctgccgggtacagccagccccct caggcccacctcagtgaacggccagtcaaggagagggagcagctgacgatggagctccag caggtcaatcagcagatcaacaagcagactgcccaggcggaccatcccagcccggaggag tggtcgtcagggagcgtctccagccaacagctgagcctggagctccaccatgtggagagg gagatcggcaagaggacccgccagatagccctggagcaccttgtgagtcatgatgggagt ggggcgtataagctgaagcccactgagaacgggcagagagcagagcactcgttggtcctc agtgagggctgtaacggtcccagtggtgtgctgcaggacggcagtgtgtccagcggtggt ttgtcctgccttaccagcaagacctcgtccctcagcctgtctgcagaccccatcgctggg ggcactgaccgaaagaccaacggcgtggtccacctgtgctcctag

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