Salvelinus namaycush (lake trout): 120053756
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Entry
120053756 CDS
T07522
Name
(RefSeq) zinc finger RNA-binding protein-like
KO
K13203
zinc finger RNA-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120053756
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120053756
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
120053756
NCBI-ProteinID:
XP_038856908
UniProt:
A0A8U1BKT5
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All DBs
Position
Sna9:16885813..16918392
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AA seq
1021 aa
AA seq
DB search
MAASNYYGFTHGAGPQYSVQPPPAYAHPTTASYNVQPAPAVAHAVTASYASAPAQPARPV
ASAYPVAYQTHPAPPDYGYRQPDPTPQPTTTPQTYQLPIYTETDNYSYGRLPPATSYETK
QYYQTSIAPAQRTPTEAYYQTGVKSGYSPVSTVYSQPPPPQRHVTTLKPLAPASSVSTSY
NIYPVSTSVQQPPISSYTPCSSFSSTAGTYSGVSYSTYDSSGYTSTPSYYQPAQLPPPQP
QPPPQQSHPPPKQLTSSSWSNAGSNMVTAPTVNAYKKPMFHQNKLQKPKGPPKQPQLHYC
DICKISCAGPQTYREHLEGQKHKKKDAALKSGSAGGSNGPRGIQTQLRCELCDIACTGVD
AYAAHIRGAKHQKVVKLHTKLGKPIPSTEPVLVNNAPIISTSTAGKTTPIIVTATDPVAP
PKLVVVNATKAPAPVKKPVAPKITLLANKPATPPVAKENEAKQSATASKSETTSDDEDGD
GVGRQGNVQPVGHDYVEEVRNDDGKVIRFHCKLCECSFNDPNAKDMHLKGRRHRLQYKKK
VNPELPVEIKPSNRARKLQEGKLRKQKQKAVLKRQRDDEQRWHLEMRSEPDGSWHTEMSR
YEEGMYWRRREEEQQLYWGEQRHMMAPPPLMSRPGMPVPPLLQPMRRPDSPDDRHIMAKH
STIYPVEEELQAVQRIVSHTERALKLVSVSLLEKEPLSAAPSAAPSAAPEADAGEKGPDN
QAARMLKGVMRVGILAKGLLLHGDRNVELILLAAKKPTLSLLKDIAEQLPKEMAPFSEDQ
YEVKAHPEEANIVIFSSKEPKMQVTISLTSPLMREDPAPDKEEKAGDKAAEKGVPEKDPA
DVLNQNKCLEYLAALRHAKWFQARANGLQSCVIIIRVLRDLCQRVPTWGKMPSWAMELLV
EKAISSATGPLSPGEAMRRVLECIATGILLPDGPGLLDPCEKHQTDALGSMTKQAREDIT
ASAQHALRLLAFRQIHKVLGMDSLPASKASARNRKRRRDGSETGEGEVKKDKKEDSEEVD
A
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaagcaattattatggattcacgcatggtgccggtcctcagtacagcgttcag
cctccaccagcctatgcccatcccaccacagccagctacaatgtccagccggcccctgcc
gtggcccatgcagtgactgcctcctatgcctctgcccctgcacaaccagccaggcccgtt
gcctctgcctacccggtggcctaccagacccaccctgcccccccagactatggctaccgg
cagccggaccccacgccccaacccaccaccaccccacagacataccagctaccgatatac
actgaaacggataactacagttacggacgcctgcctccagccactagttatgagactaag
cagtactaccagacgagtatagcaccagcccagcggacaccaacagaagcttactaccag
acaggcgtgaagagtggctacagtccagtcagcacagtatacagccagccaccaccacca
cagaggcatgtcacaactttaaagcctctggcccctgccagctcagtgtccaccagctac
aacatctacccagtgtccaccagtgtacagcagccccccatctcgtcttacaccccctgc
tcgtccttcagctccacagctggcacctactctggcgtcagctactctacctatgattca
agtggttacacttccaccccctcgtactaccagcctgcccagcttcctcctcctcagccc
cagccgcccccccagcagtcccatccgcctcccaagcagctcaccagctcctcctggagc
aacgcgggcagcaacatggtgaccgctcccacggtcaacgcctacaagaagcccatgttc
caccagaacaagcttcagaagccgaaagggccgcccaagcaaccccagctgcactactgc
gacatctgcaagatcagctgtgctggaccgcagacgtatcgagagcacctcgagggccag
aagcacaagaagaaggatgcagctctgaagtctggcagcgcgggggggagcaacgggccc
cgggggattcagacccagctacgctgtgaactatgtgacattgcctgcactggcgtagac
gcgtacgctgcccatatccgaggggccaagcaccagaaggtggtgaagctccacaccaaa
ctaggcaaacctataccttcaactgagcctgttttagtgaacaatgctccaattatctca
acgtcgacagctgggaagacaacccctatcattgttacggcaactgacccggtagcgcca
cccaaactagtggtcgtaaacgccaccaaggccccagcacctgtgaagaagccagtcgca
cccaaaataaccctccttgccaacaagccggccacccctccagtagccaaggagaatgag
gccaagcagtcagcaacagcgtcaaagagtgagaccacgagtgacgatgaggacggggat
ggagtggggaggcagggcaacgtccagcctgtaggacatgactatgtggaggaggtgcgt
aatgatgatgggaaggtaattcgcttccactgtaaactctgtgaatgcagtttcaatgac
cccaatgctaaagacatgcacctgaagggacgcaggcaccggctgcagtacaagaagaag
gtgaacccagagctgccggtggagatcaagcccagtaatcgggccaggaagctgcaagag
ggcaaactgaggaaacagaagcagaaggctgtgctgaagagacagcgggatgacgagcag
cgctggcacttggagatgaggtcagagccagacggcagctggcacacagagatgagccgc
tatgaggagggcatgtactggaggaggagggaggaggagcagcagttgtactggggggag
cagaggcacatgatggccccccctccgctcatgagccggcccggcatgccagttcccccc
ctactgcaacctatgcgtcggccggactccccagacgaccgccacatcatggccaaacac
tccaccatctaccctgtggaggaggagctgcaggcggtgcagaggatcgtctcccacact
gagagagccctcaaactggtgtctgtctccctgctggagaaagagcctctgtcggctgct
ccgtcggctgctccgtcggctgctccagaggctgatgctggagagaaaggaccggacaac
caggcggcccgtatgctgaagggggtgatgagggtgggcatcctggccaagggcctgctg
ctccatggggataggaacgtggaactcattctgctggctgccaagaagcccaccctctct
ctgctgaaggacatcgctgagcagctgcccaaagaaatggcgccattttctgaagatcag
tatgaagtgaaggctcaccctgaggaagccaacatcgtgattttttcgagcaaggagcca
aaaatgcaggtcaccatctctctaacctcgccactgatgagggaggaccctgcccctgac
aaggaggaaaaggcaggagacaaagcggctgagaaaggggtgcctgagaaagaccctgct
gatgttctgaaccagaacaagtgcctggaatacctagctgctctgagacacgccaagtgg
ttccaggctcgtgccaatggtcttcagtcctgtgtgatcatcattcgagtgttacgggat
ctttgccagcgagtgccaacctggggcaagatgccatcctgggctatggagctgctggta
gagaaggccatcagcagtgccacagggcccctcagcccaggggaagccatgcgtagggtc
ctggaatgtatcgctactggcatcctactgccagatggtcctgggctgctggacccctgt
gagaaacaccaaaccgatgctctggggagcatgaccaaacaagccagggaagacattact
gccagcgcacagcatgctctacgactgctggcgttccgtcagatccacaaggttctgggg
atggactccctgccggcgtccaaggccagcgctcggaaccgcaagcgcagacgggacggg
agcgagacgggagagggggaggtcaagaaagacaagaaggaggattcagaagaggtggat
gcttga
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