Salvelinus namaycush (lake trout): 120053816
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Entry
120053816 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220-like
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120053816
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120053816
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120053816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
CTD
Decapeptide
PMG
Pox_A_type_inc
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_2
PRP21_like_P
zf_UBZ
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
120053816
NCBI-ProteinID:
XP_038857005
UniProt:
A0A8U1BIF9
LinkDB
All DBs
Position
9:complement(9498557..9551056)
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AA seq
679 aa
AA seq
DB search
MDLHWPAFKMDSSSYLPGPLASPALMVLASTAKTGRDASVPCQASVPCQTPRSFRVPISE
KDLPFPSGSYTFASMYNRQGPISGHGSFPARDFPASLLHLHPQFQFHPNNLDCPSLGMLN
HIGVGAFRPFSSPPEEREARGYQSAFTPAKRLKGCYTDSEGKEYDFGGGCFLSGSPGSLK
AAEDSGRKLFTVSGLLSDREASSSPEDRKEHCKSKSNVLLDSLPPVCPVCHAVLPPGELQ
EHMEQEMGRLAQLQIRLSVSMWRGPAFTGYRTSGYRTSRYRTSGYRTSGNRTSGNRTSGY
RTTGYCTSGYCTSGYRTTGYRTSGNRTSGNRTSGNRTSGYRTSGYRTTGYCTSGYCTSGY
RTTGYRTSGYRTSGYSTSGYRTSGYRTTGYRTSGYCTSGYRTTGYRTSGYRTTGYRTSGY
RTSGYRTSGYSTSGYRTSGYRTTGYRTSGYCTSGYRTTGYRTSGYRTTGYRTSGYRTSGY
HTSGSVFVSSRTSKEGRGDSDADLDVDGDDTLQYGRVQCTEADIPCSGQDPGEVEGREAL
RGAFLNVGTLSNRVTLEHSKWTNEGSPSTSNGESNKQDNSIDSLHRTCKNSDIDMVSEDS
GLTTLDSLRNRIRDLEKQLSRGDRHNCLICRDTYTTPLTSIQCWHAHCEECWLRTLGAKK
LCPQCNTITSPGDLRRVFL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggacctccactggcccgccttcaagatggacagttcctcctacctgcccggtcccctg
gcgtccccagccctgatggtgctggcctccacagccaagacaggccgtgatgcctccgtc
ccctgccaggcctccgtcccctgccagaccccgaggtccttcagagtcccaatctctgag
aaggacctccccttcccctccggctcctacacatttgcctccatgtacaaccgtcagggg
cctatctccggccatggctccttccctgccagagacttccctgcctccctgctccacctt
catccccagttccagtttcaccccaacaacctggactgcccttccctggggatgctcaac
cacattggggtaggggccttccgacccttctcctcccctcctgaagagagggaggccagg
ggttatcagtcagccttcacccctgctaagaggctcaagggctgctacacagattctgag
gggaaggagtatgattttggaggagggtgtttcctctctggctcaccgggatcactcaag
gccgctgaggattctgggaggaagttgtttacggtgtctgggctgctgtcggacagagag
gcctcgtctagtcctgaggaccgcaaagaacactgtaagagtaagagtaatgtcctgttg
gactctctgcccccagtgtgtccagtgtgccatgctgtgttaccaccaggtgagctacag
gagcacatggagcaggagatgggcagactggcacagttacaaatcaggctcagtgtgtcc
atgtggagagggcctgcttttacaggttaccgtacctcaggttaccgtacctcacgttac
cgtacctcaggttaccgtacctcaggtaaccgtacctcaggtaaccgtacctcaggttac
cgtacaacaggatactgtacctcaggttactgtacctcaggttaccgtacaacaggttac
cgtacctcaggtaaccgtacctcaggtaaccgtacctcaggtaaccgtacctcaggttac
cgtacctcaggttaccgtacaacaggatactgtacctcaggttactgtacctcaggttac
cgtacaacaggttaccgtacctcaggttaccgtacctcaggttacagtacctcaggttac
cgtacctcaggttaccgtacaacaggataccgtacctcaggttactgtacctcaggttac
cgtacaacaggataccgtacctcaggttaccgtacgacaggttaccgtacctcaggttac
cgtacctcaggttaccgtacctcaggttacagtacctcaggttaccgtacctcaggttac
cgtacaacaggataccgtacctcaggttactgtacctcaggttaccgtacaacaggatac
cgtacctcaggttaccgtacgacaggttaccgtacctcaggttaccgtacctcaggttac
catacctcagggtcggtgtttgtgagcagcaggacgtctaaggaaggccgtggtgacagt
gacgctgacctggacgtggatggagatgacactctgcagtatggaagagtacaatgtacg
gaggcagacatcccctgttcagggcaggatcctggggaggtggaggggagggaagcactg
aggggggcgtttttaaatgttggtacactgtccaacagagtaactctggaacattccaaa
tggacaaatgagggaagtccatccactagcaacggagagagcaacaaacaggacaacagc
atagactccctacacaggacctgtaaaaatagtgacattgatatggtctctgaggattct
gggctgacgacgttggattcactaagaaatcgtatacgggacctagagaagcagctgtcc
agaggagacagacacaactgtctaatctgtagggacacttacacaacacccctcacctcc
atccagtgctggcatgcccactgtgaggagtgctggctccgcactctgggggctaagaag
ctgtgtccacagtgtaacaccatcacttctcctggggacctgagacgggtatttttgtga
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