KEGG   Salvelinus namaycush (lake trout): 120053839
Entry
120053839         CDS       T07522                                 
Name
(RefSeq) negative elongation factor B-like
  KO
K15180  negative elongation factor B
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120053839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:snh03021]
    120053839
Transcription machinery [BR:snh03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     120053839
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 120053839
NCBI-ProteinID: XP_038857033
UniProt: A0A8U1BW98
LinkDB
Position
Sna1:complement(12819737..12847765)
AA seq 583 aa
MFAGLPELGISNGEDLKETLTNCTEPLKAIDQFQTENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELRDKLMERVRTIAEGKDEDRYGKLKELLEKSFPLVKMPSIQPVVMQVLKHLP
KVPEKKLKLVMADKELYKVCAVEVKRQIWQENQALFGDEVSPLLKQYIVAKEAALFSSDL
SILHNFFSPSPKARRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAEL
LMSLHDLDISEICSVDSCHKFTWCLDACIREKFVDAKRARELQGFLDGVKKGQEEVLGDL
SMILCDPFASNTLVLSTVRNLQELLSQDALPRDSPDLMLLLRMLSLGQGAWDMIDSQVFK
EPRLELEVVTRFLPAMLSVLVDDYTFTVEQKLPSEEKTSLSYPTALPDNFNKYLQENRVA
CEMGLYYALHIAKQRNKNALQRLLPALVETYNDMAFGDIFLHLLTAHLTLLSDEFGTEEF
CSAVFDGFLLTSFSSKENVHRHNLRLLLHLHQKVLPSCVETLVKTLEPSKQSNDQVKELF
TKLTEKLEAQKKSPPQPDEAPSLDLGLHPVKVPTTASTPTTSI
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgtttgcgggcctgcctgagcttgggatatctaatggcgaggatctaaaagaaacactg
accaactgcacagagcctctgaaagccattgaccagtttcagacagaaaatggcattttg
ttaccaactcttcagtcagctcttcccttcctggaccttcacggaactcctcggttggag
tttcaccagtctgtctttgacgagcttcgtgacaagttgatggagcgagtccgtactatc
gcggagggcaaggatgaggaccgttatggtaaacttaaagagctgctggagaagagcttt
ccgctggtgaagatgccttccattcagccagtggtcatgcaggtgctgaagcatcttcca
aaggtaccagagaaaaagctgaagcttgtgatggctgataaggaactgtataaggtctgt
gctgttgaggtgaagaggcagatctggcaggaaaaccaggctctcttcggagatgaggtc
tcgcccctgctcaagcagtatatcgtggcaaaggaggcagcacttttcagcagcgatctc
tctattctgcacaacttcttcagcccctcccccaaagcaagacgccaaggagaggtagtc
ttgaaactgacccagatgattggaaagaatgtgaaactatatgacatggtgctccagttt
ctgcgaacacttttcctgcgtactcgtaatgtccactactgcaccctgcgtgcagagctg
ctcatgtccctccatgacctggacatcagtgagatctgctcagtagactcctgccacaag
ttcacctggtgcttggatgcctgtatccgtgagaagtttgtggatgccaagcgagcccgg
gagttgcaaggttttctggatggagtgaagaaaggacaggaggaagtacttggggacctg
tccatgatactgtgtgacccatttgccagtaacaccctggttttgagtacggtccgaaac
ctgcaagaattgctaagccaggatgctctacccagagacagtccagacctgatgctgtta
ctcagaatgctgtctcttggacaaggtgcttgggatatgattgacagccaggtctttaaa
gagcctcgattggaactggaagttgtgacccgttttctcccagccatgttgtctgtactt
gtggacgactacaccttcactgtagagcagaaactccctagtgaggagaagacctccctc
tcctaccccacagccctgcctgataacttcaacaagtacctgcaggagaacagggtggct
tgtgagatgggtctgtactacgcactccacattgccaagcagaggaacaagaatgcctta
caaaggttacttcccgcattggtggagacctacaatgacatggcctttggagacatcttc
ctgcacctcctgacagcacacctcaccttgctttctgatgagtttgggactgaagagttc
tgctctgctgtgtttgatggcttcctcctcacctctttctccagtaaagaaaatgttcac
agacacaacctacgcctgttgcttcaccttcaccagaaagtgctgccatcttgtgtggag
accttagtgaaaaccctggaaccctcaaaacagagcaatgaccaggtaaaggagctattc
accaagctgacagagaaactggaggcccaaaagaagagtcctccccagccagacgaagcc
ccctccctggacctggggctccatcctgttaaagtgcccactacagcttccactccaaca
acatccatctga

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