Salvelinus namaycush (lake trout): 120053849
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Entry
120053849 CDS
T07522
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3 isoform X1
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03020
RNA polymerase
snh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120053849 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
120053849 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120053849 (polr2c)
03400 DNA repair and recombination proteins [BR:
snh03400
]
120053849 (polr2c)
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
120053849 (polr2c)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120053849 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
120053849
NCBI-ProteinID:
XP_038857043
UniProt:
A0A8U1FBI0
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All DBs
Position
Sna9:22890156..22895453
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AA seq
275 aa
AA seq
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MPYANQPIVKITELTDENVKFVIENTDLSVANSIRRVFMSEVATIAIDWIQIDANSSVIH
DEFIAHRVGLIPLTSDDVVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNHPRVIPVTSKSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVYPRPEEWPKSEYSEIEEDEVQAPFDPNGKPERFYYNVETCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaaccagccaatagtgaagatcacagaactgacggatgagaatgtaaaa
tttgtcattgagaacaccgacctgtcggttgcgaattccatccgacgtgtctttatgtca
gaggttgcaacaatagctattgattggattcaaattgatgcaaattcttctgtgatccac
gacgagtttattgctcacagagtgggtcttatcccacttaccagtgatgatgttgtggac
aagatgcagtactccagagactgtacatgtgatgatttctgcccagaatgctctgttgaa
ctgacactggacgttcgctgcacagaggaccagacccgccatgtgacctcacgagacctg
ctgtccaaccaccctcgagtcattcctgtgacctccaagagtcgagacaatgatcccaat
gactatgttgaacaggatgacattttgctggtgaagcttaggaagggtcaggagctgcgt
ctcagagcttatgccaaaaaaggttttggcaaggagcatgccaagtggaaccctacagca
ggggtgtcctttgagtatgacccagacaatgcactgaggcacactgtttatccacggcca
gaggaatggccaaagagtgaatactcagagattgaggaagatgaggtgcaagcacccttt
gaccccaatggcaaacctgagaggttctattacaacgtggagacatgtggctcactgcga
ccggagaccatcgtcatgtctgctctggcagtgctgaaaaagaaactgagtgatttacag
acccagctgagccacgaaatccagagtgatgtcctcacaattaactga
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