Salvelinus namaycush (lake trout): 120053911
Help
Entry
120053911 CDS
T07522
Symbol
ripor1
Name
(RefSeq) rho family-interacting cell polarization regulator 1 isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120053911 (ripor1)
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120053911 (ripor1)
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120053911 (ripor1)
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
120053911 (ripor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HEAT_2
HR1
FAM92
DUF5955
Motif
Other DBs
NCBI-GeneID:
120053911
NCBI-ProteinID:
XP_038857147
UniProt:
A0A8U1BQM6
LinkDB
All DBs
Position
Sna9:complement(26956678..27068577)
Genome browser
AA seq
1127 aa
AA seq
DB search
MSISLRSFSLNPRNLLLVWVVNTERKPHIDKKMYSGFGGSPSRAVSTMSLSVRPSRRVIS
RSVTRSQSFAGVNSYDKPYRNLSVFSTPRVTRKPSRASRMFTLSAKSPPPKVPQPERLDE
VYEALKRGLQSYLQVHQIELDSLSRQMRESKRNSRLGFLYELDKQVKVVERFMRRLEFHL
SKIDELYEAYCMQHRLRDGANKMVKAYTVSQGSREARESLSEANKGYKEYTENMCMLESE
LENQLGEFHVKMKGLAGFARLCAGDTYEIFMKYGRQRWKLRGRMEINGKQVWDSEDMVFL
PLITEFLSIKVTELKSLANHVVVGNVSCETKDLFAALPRTVAVDINDLGTIKLSLEVTWN
PFDKDDQASAASTVNKPPTVNKRFSTYNQSPPDTPSLREQAFYNMLRRQEEVENGTAWSN
SSESSDDSSSPQLSLGLRHANKNLVQLEVQAAAPSIEISFAPRDSATSTPTRSAKPEDVQ
KEEPDTGAAGKEEDSGKQAVPNGQTRYSRSLSHISENSADGVLMDRSTCESVEPSEATSL
QSGISINDIEMEMPARAESASVPAETVVVREPSEQPAPATVTGEESRPESRYSAGSIESD
TGLEVVSGAVSEVDPELQSSAPTRTDAVSQQGASLDLRADSQAQTQSTEEISYTAHRAVV
VEAEKPGPVVVASPTEGEKQQAVDSEVEEALSAVIASLDDYRGQFPELQVLEQELRLLEE
TLTGRTCSCLSSVQSLAVETALGSFDFLNISDLEDEEEEEDGEKGSVTDRPPEESAGEDE
CCEERCWESHSSRPVSTGCQALDHTLLVHLKNCSAQLLRLGTFGPLRCGEMYALDRLLRE
ARVLELIRRVAKETPGGATQPDEVVPQLEQCQGATLLWQQCTDDGSVYSTSTDAFLTTLA
TAYTNRLPERGVSLADTVFLRLVERILERRLPTRGGGVARDMLTLFQFWSYLEAEGVSEL
DTHIIELAEEVWLVQSLQSGDQEVLVKALKRPPESSLKREGLHAVSLLLRDPRGKVSASA
SSLLRSLADQPRHRERALVSCLELLENESVETRVCGCKALACLKAKESIDQLVYLCRSDK
EDVRDAAKQALLVLGEEGKLAHRHVEISLQEGVPRLFSPGSMASTAF
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctctttaaggtcgttctcattaaacccaaggaaccttctcctggtctgggtg
gtcaacactgagaggaagccacatatcgataaaaagatgtacagtggatttggagggagt
ccctccagagctgtctccaccatgtccctttccgtgcgcccatcgcgccgagtcatctcc
agatccgtcactaggagccagtcctttgccggggtcaactcctacgataagccctacagg
aacctgtcggtgttcagcaccccgagggtcaccaggaagccctccagagccagtaggatg
ttcaccctctctgccaaatccccaccgcccaaggtgccccagccagagaggctggatgag
gtctacgaggctctgaagagaggcctgcagtcttacctgcaggtgcaccagatagagctg
gacagcctgagccgacaaatgagggaatccaagaggaactctcgtctggggtttctctat
gagctggataagcaagtgaaggtggttgagaggtttatgcgacggcttgagttccatctc
agcaagattgacgagctgtatgaggcctactgtatgcagcaccggctgagggatggggcc
aataagatggtgaaggcctacacagtctcccagggcagccgcgaggccagagagagcctg
tctgaggccaacaaaggctacaaagagtacacagagaacatgtgcatgctggagagcgag
ctggaaaaccagctgggggagttccatgttaagatgaagggtctagcagggtttgcacgg
ctttgtgctggggacacgtatgagatctttatgaaatatgggcggcagcgctggaagctg
aggggaaggatggagatcaatggcaagcaggtgtgggacagcgaggacatggtctttctg
cctctcatcacagagttcctatcaataaaggtgacagagctgaagagcctggccaatcat
gtggtggtggggaacgtgtcatgtgagaccaaagacctctttgctgctctaccccggacg
gtggccgtggacatcaatgacctggggaccatcaaactgagcctggaggtcacctggaac
cctttcgacaaggatgaccaagcctcggccgccagcactgtcaacaaaccccccacggtg
aacaaacgcttctccacctacaaccagagtcctcctgataccccctccttacgggaacag
gccttctataacatgctgaggaggcaggaggaggtggagaatggcacagcctggtctaac
tcttcggagtcgtcagatgactcgtccagcccccagctgtccctggggctgcgtcacgcc
aacaagaatctggtccagctagaggttcaggccgccgcgccctccattgagatctccttt
gctcccagagactctgccacctccacccctacccgctcagccaaaccagaggatgtgcag
aaggaggagccagacactggagcagcagggaaagaggaggattctgggaaacaggctgtg
cctaacggccaaacacgttattcacgctccctcagccatatcagtgagaacagtgccgat
ggcgtactgatggacaggtcaacttgcgaatcagtggagccctctgaggccacctccctg
cagtctgggatctctataaacgatattgagatggagatgcctgccagggcggagtcagcc
tctgtcccagctgagactgtggtggtcagggaaccatctgagcaacccgccccagctact
gtcaccggggaggagagcaggccggagagcaggtattctgcagggtctatagagtcagac
acggggttagaggttgtttcaggggctgtttcagaggtagatccagaactccagagctct
gcacccactaggactgatgccgtgtctcagcaaggtgcctctctggatctcagggcagac
tcacaagcacagacccagagcacagaggaaatatcatacactgcccacagggcggtggtg
gtggaggccgagaagcctgggcctgtagtagtggccagccccacagagggtgagaagcag
caggctgtggacagtgaagttgaggaagccctgagtgcagtcatcgcttctctggatgac
tacaggggacagtttcctgagttacaggtcctggagcaggagctcagactactggaggag
acattaacgggccgtacatgcagttgtttgtccagtgtccagagtctggcggtggagacg
gctctcggcagctttgacttcctcaatatctcagacctggaggatgaagaggaggaggag
gatggggagaaagggagtgtgacagacaggccaccagaggagagtgcaggggaggatgag
tgctgtgaggagagatgctgggagtcccactcctctagacctgtgagcacaggctgccag
gctctagatcatacactactggtccatctgaaaaactgcagtgcacaacttctgaggctg
gggacctttgggcctctgcgctgtggggagatgtatgctctggaccgcctgctcagggag
gcccgcgtcctcgagctcatcagacgtgttgccaaggagacccctggaggagccactcag
ccagatgaggtggttccccagttagaacagtgccaaggggcaacattgctatggcagcag
tgtacggatgatggcagtgtgtacagcacctccacagacgctttcctcacaacactggcc
actgcttacaccaacagactgcccgagagaggagttagcctggcagacacagtgttcttg
cgtctggtggagaggattctggagaggaggctgcccacgcgtgggggcggggtggccaga
gacatgctgaccctcttccagttctggagctacctagaggccgagggagtgagcgagttg
gacacacacatcattgaattagcggaggaggtgtggctggttcagagcctgcagtcaggg
gaccaggaggtactggtgaaggccctgaagaggcctccagagagcagcctgaagagggag
ggcctgcatgctgtcagcctactgctcagggacccgcgtgggaaggtgtctgcctctgcc
agctccctgctccggagcctcgccgaccagccacgccatcgagagagggccctagtaagc
tgtctggagcttctggagaatgagagtgtggagacgcgagtgtgtggctgtaaagcactt
gcatgtctgaaggccaaagagagcatcgaccagctggtctatctctgtcgatcagacaag
gaggatgtgagggacgctgccaaacaagcgctgctggtgcttggcgaggaggggaagttg
gcccacagacacgttgagatatcactgcaggagggagtgccacgcctcttctcccctggc
agcatggccagcaccgccttctaa
DBGET
integrated database retrieval system
