Salvelinus namaycush (lake trout): 120053936
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Entry
120053936 CDS
T07522
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120053936 (chd2)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120053936 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
120053936
NCBI-ProteinID:
XP_038857179
UniProt:
A0A8U1BHH9
LinkDB
All DBs
Position
Sna9:complement(29264768..29297418)
Genome browser
AA seq
1822 aa
AA seq
DB search
MMKNKNKKQEDEGSTQSNASSNSASEESNHSGLESGSQSESEQGRERRRLHHSGESNSSS
ESGSQSGSESESQQASAEVKDRQPVKKKDNLSDVKKMWEEHPDVYGVRRSNRSRQEPARL
NIGAGGSSDSEGESPKRKAPRQKKKENTWKSDESDDDDDDDEEDASSADSEQEERKVRSR
RLPARRPQNKSSTVKKQQPPKGRKTRKQESSVEEDDDEEEEEDDDDDDDDEDTPKRQTRR
RVSAKVSYKEDQNDFETDSDDLIEMEGAEVEPEDDSETIEKIMDTRTGKKGACGASTTQY
AVEENGDPGADFDPEKDEGETHYLIKWKGWSYIHNTWESIDSLTQQKVKGLKKLDNFKKK
NDELNAWLSKASPEDSEYYNCQQELTTDLNKQFHILERVIATKTGKTQGLSDFPSHSHKN
GASSNEPEYLCKWMGLPYSECSWEDGSLLGKKFQHCIDSFTNRNSSKTVPSKDCKVLKQR
PRFVALKNQPSYIGDENLQLRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLS
YMFHQHQLYGPSLVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKSIRDYEWVCHQT
KRIKFNALITTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIEFRSNHRLLI
TGTPLQNSLKELWSLLHFLMPDKFENWEDFESEHGKGTDNGYQSLHKVLEPFLLRRVKKD
VEKSLPAKVEQILRVDMSAVQKQYYKWILTRNFRALQKGTRGSSSGFLNIVMELKKCTNH
GFLIKQPEEECDTPQEHLQALVRGSGKLVLLDKLLTRLRDRGNRVLIFSQMVRMLDILAE
YLALKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIF
DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDT
TGRTVLDNNSGNSNSNPFNKDELTAILKFGAEDLFKEAEGEETEPTEMDIDEILRLAETR
ESDQGSSATDELLSQFKVANFSNMEESAPEMVERMVPDWDDIIPEDQRRRLEEEQKQKEM
EDIYMLPRSRSSNKRAQANDSDSDVGSKLKHRSSGSESETDDSGDDKKPKRRGRPRARKN
NVEGFTDAEIRRFIKAYKKFGAPLERLEGIARDSELVDKSQADLKRLGELIHSSCVTAVQ
EHEEHLRENPSEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPANPAERNQF
QLTCRVKVPHFDVDWDLQDDTQLLLGVYEHGYGNWDLMKTDPDLKLADKILPDDPEKKPQ
GKQLQARSDYLLKMLKKEADCKDVTKEEAKVKKRKPRVKKENKAPKDEQGNDISSPHMSD
NPSEEGEVRDDGTEKTPTKKRQKKKDNKENKEKHGTPKKEKDTDKDKKRPKPKKEKAKGA
KGKKPQGPVHITAGSDPVPIGEEDDELDQENFSICKERMRPVKKALKQLDKPDEGLSVQE
QLQHTRTCLLKIGDRITECLKAYSDPEHVKTWRRNLWIFVSKFTEFGARKLHKLYKMAQK
KRSREEEKEHRKKGDDPSGRKKSFRAEASGSSRDSTGTQPSSKSHPGMPHPSPTSPHGPH
RESYNQSNKRHFGNDDRGDWQRDRKYNYPGNSNQPWQNERHHPYDAHRYKDHHYGDRRPR
EDSYRSSSSSYRSGGSSSSPRKRPYDQYDSDREHRDRRAYYDRHPDSKRRRGDDFRPPQD
FRGSGGHPQDFRVRMPEHRGPPGPAGPEHFTRPYPDNKPPPLLDPRSPQAQKSPQDSRSP
TVERTAEQKAAAADLNWNNRKT
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataagaataaaaagcaagaagatgaaggttcgactcaaagcaatgcatca
agcaattcggcctcagaagaatcgaaccactctgggttggagtctgggagtcagtcggag
agtgagcagggcagggagaggagaagattgcaccactcaggagagtccaacagctcttct
gaatctgggagccagtccgggtctgagagtgaatcccagcaggcctcggcagaggtcaag
gacagacaaccagttaaaaagaaagacaatctgtcagatgtgaagaagatgtgggaagag
catccagatgtctatggggtcaggcgatcaaatcgcagtagacaagaacctgctcgtctc
aatattggagctgggggtagcagtgactccgaaggtgaaagtcctaaaagaaaagcacca
agacagaagaagaaagaaaatacctggaaaagtgatgaatcggatgatgatgatgatgat
gatgaggaggatgccagcagtgcagacagtgagcaggaagagagaaaagttagatccaga
cgacttcctgctagaagaccacagaacaaatcatctacagtcaaaaaacagcagcctcca
aagggaaggaaaaccaggaaacaagagtcatctgtggaggaagatgatgatgaggaggag
gaggaggatgatgatgatgatgatgatgatgaagataccccaaagagacaaacccggcga
agggtgtctgctaaagtcagttacaaggaggaccaaaatgactttgagacagactctgac
gacctgatagagatggagggagctgaggtggagccggaagatgacagcgagaccattgag
aagatcatggataccaggacaggcaaaaaaggagcctgtggggcttccactacccagtat
gctgtggaggaaaatggggacccaggagccgactttgacccagagaaggatgagggagag
acccattacctgatcaagtggaaaggctggtcctacatccacaacacctgggagagcatc
gactccctcactcaacagaaggtcaagggactcaagaaactagacaacttcaagaagaag
aacgatgagctcaatgcttggttgagcaaagcatcccctgaggattcagaatattacaac
tgccagcaagagctaaccactgatttaaataagcagttccatattctggagagagtcatt
gcgactaaaaccggaaagacacagggactctcggatttcccctctcacagccacaagaat
ggtgcttcttccaatgagccagagtacctgtgtaagtggatgggcctgccttattcagag
tgcagctgggaggatggatctctgctggggaagaagttccagcactgtatagacagcttc
accaacaggaactccagtaaaacagtcccctccaaagactgcaaagtgttgaaacagagg
cccagatttgttgcactaaagaaccagccatcgtacattggggatgagaacctgcagctg
agagattaccagttagatggactgaactggctggctcactcctggtgcaggtgcaatagt
gtgatcctggctgatgagatgggtctggggaaaaccatccagaccatctcgttcctgtcc
tacatgttccaccagcaccagctgtatgggccctccctggtggtggtacccctatccacc
ctcacctcctggcagagagagtttgacacctgggcccccgatatgaacgtggtggtctac
ttgggagacgtgatgagcaggaaatcgatccgtgactatgagtgggtatgccatcagacg
aagagaataaagttcaatgcacttataaccacgtatgaaattctactgaaagacaagggg
gtgttggggaacataaactgggctttcttgggtgtggacgaagctcacaggctaaagaat
gacgactccctgttgtacaaaaccctgatcgagttccggtccaaccacagacttcttatc
acagggacaccactgcagaactctctcaaagagctgtggtcccttctgcacttcctcatg
cctgacaagtttgaaaattgggaagattttgaaagtgagcatggtaaagggactgacaat
ggctaccagagcctccacaaagtccttgagcccttcctcctgaggcgtgtaaagaaggat
gtggagaaatccctgcctgccaaggtagaacagatcctccgtgtggacatgtctgctgtg
cagaagcagtactacaagtggattctgaccaggaacttcagagccctgcagaaaggcacc
cgaggcagctcctctggcttcctcaacatcgtcatggagctgaagaagtgcactaaccat
ggtttcctcatcaaacagcctgaggaagagtgtgacactccacaggagcacctgcaggcg
ttggtgaggggcagtgggaagctggttcttctggacaagctactgaccagacttcgggac
aggggcaacagagtcctcatcttctcccagatggtgcgcatgttggacatcctggctgag
tacctggccctgaagcgctacccattccagcgcctggatggctccataaagggagaaata
cgaaaacaagcacttgaccactttaatgctgaaggctctgaggacttctgtttcctgcta
tccacaagagctggaggtttgggtatcaaccttgcctctgcagacactgtggtcatcttt
gactctgactggaaccctcagaatgacctgcaggctcaggccagggctcacaggattggc
cagaagaagcaggtgaatatatatcgcttggtcacaaagggatctgtggaggaggacatt
attgagagagccaagaagaagatggttttggaccatcttgtaattcagagaatggacacc
actggtcgaactgtattggataacaactccggaaattcaaactccaacccattcaataaa
gatgagctgactgccattctgaagtttggagctgaagatctgttcaaagaggcagaagga
gaggagactgaacctacggagatggatattgatgagatcttgcggttggctgaaaccaga
gaaagcgaccagggatcaagtgccacagatgagcttctctctcagttcaaggtggccaac
ttctccaacatggaggagagtgctccagagatggtggagcggatggtgcctgactgggac
gacatcatcccggaggaccagcggcggaggctggaggaggagcagaagcagaaggagatg
gaggacatctacatgctgcctagaagcaggagctccaataagagggcccaagccaacgac
agtgacagtgacgttggctccaagctgaagcaccgctcctcgggctctgagagcgagacg
gacgacagcggcgatgacaagaagccaaagaggagaggcaggcccagagcccgcaagaac
aacgtggagggttttactgatgcagagatccgcaggttcatcaaggcttataagaaattt
ggagctccgcttgaaaggctggagggcattgcccgggactcagagctggtggacaaatcc
caggcagacctgaagagactgggagagctgatccatagcagctgtgtgacggctgtccaa
gagcatgaagagcacctcagagagaatcccagtgaagccaaaggtcctgggaagcgcaga
ggtattaacatcaagatctcaggagtgcaggtcaatgccaagtccatcattcagcacgag
gaggagtttgagccactgcacaaagctgtaccagccaatcctgctgagagaaaccagttc
caactgacctgcagagtgaaggtgcctcactttgacgtggactgggatctgcaggatgac
actcaactgttgctgggggtctatgagcatggctacggcaactgggatctgatgaagacc
gacccggatctcaaactcgcagacaagattctccccgatgacccagagaagaaacctcaa
gggaagcagttgcaggccagatcagactaccttctgaagatgctgaagaaagaagcggac
tgtaaagatgttactaaggaggaggccaaagtgaagaagaggaagcctcgggtgaagaaa
gagaacaaggcccctaaagatgaacagggcaatgacatctcctccccccacatgtcagac
aacccctcagaggaaggggaggtgagagatgacgggactgaaaaaactcccacaaagaag
aggcagaagaaaaaggataacaaagagaacaaagaaaaacacggaactcctaaaaaagag
aaggacacggacaaagacaaaaaacgtccgaagccaaaaaaagaaaaggctaaaggagct
aaagggaagaagccccaggggccggtccacattactgctgggagtgaccctgttcccatc
ggagaggaggacgatgagctggaccaggagaacttcagcatatgtaaggagcgcatgagg
ccagtgaagaaggccctaaaacagctggataagcctgacgagggcctgtctgttcaggag
cagctccaacacacacgcacctgcctgctgaagataggagaccgcatcactgagtgcctt
aaagcctacagcgacccagagcatgtcaaaacatggcgtcggaacctctggatttttgtg
tctaagttcacagaatttggagcgaggaagcttcacaagctgtacaagatggctcagaag
aagcggtctcgggaggaggagaaggagcatagaaaaaagggggatgacccgtcaggcagg
aagaagtctttccgagcagaggcgtctggttccagtcgagactccaccggcacccagcca
tcgtccaagtctcatccaggcatgccccacccctctccaacgtccccccatggtccccac
agagaaagctacaaccagtccaacaagcgacactttggaaatgatgatcgaggagattgg
cagagagatcgtaaatacaactaccctggaaatagcaaccagccctggcaaaacgagcgg
catcatccatatgacgcccatcggtataaggaccatcactatggcgaccgtcgtccgcgt
gaagactcctaccgcagcagctctagtagttaccgtagtggcggcagcagcagctcccct
cggaagaggccgtatgaccagtatgacagcgacagagaacacagggaccgtcgtgcctat
tacgacagacatccagactcaaagcggagacgcggcgatgacttccgtcctccccaagac
ttcagggggagtggaggccatccccaggacttcagggtgaggatgccagagcataggggg
cccccggggccagcagggccagaacactttacccggccctatccagacaacaaacccccc
cccctgctggacccacgctccccacaggcgcagaagtccccccaggactcgcgctcgcca
actgtagagcggactgcagagcagaaagcagctgcggctgatttaaactggaacaacagg
aagacatga
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integrated database retrieval system
