Salvelinus namaycush (lake trout): 120053940
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Entry
120053940 CDS
T07522
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
KO
K10373
tropomyosin 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04260
Cardiac muscle contraction
snh04261
Adrenergic signaling in cardiomyocytes
snh04814
Motor proteins
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120053940
04820 Cytoskeleton in muscle cells
120053940
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120053940
04261 Adrenergic signaling in cardiomyocytes
120053940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120053940
04147 Exosome [BR:
snh04147
]
120053940
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
120053940
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of microglial cells
120053940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
TMF_DNA_bd
DUF3450
PUMA_CC
DUF745
EzrA
CENP-F_leu_zip
Crescentin
Lebercilin
GAS
Motif
Other DBs
NCBI-GeneID:
120053940
NCBI-ProteinID:
XP_038857187
UniProt:
A0A8U1EQW1
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Position
Sna9:30336189..30353591
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AA seq
284 aa
AA seq
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MDAIKKKMQMLKLDKENALDRAEGAEGDKKAAEDKSKQLEDEISELEKKLRITEDERDKV
LDEFQAAEEKLLSAEEVATKAEADVASLNRRIQLVEEELDRAQERLTTALTKLEEAEKAA
DESERGMKVIENRASKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCSELEEELKTVTNNLKSLEAQSEKYSHKEDKYEEEMKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEEKLAHAKEENLDMHQMLDQTLMELNNM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgcttaagctcgacaaggagaatgctttggac
agagctgagggagccgagggagacaagaaggcagcagaggacaagagcaaacagttagag
gatgaaataagtgagttggaaaagaaattgcggatcaccgaagatgagagagataaagtg
cttgatgaattccaagccgccgaggaaaaattgctgagcgccgaggaggtggccaccaag
gctgaggccgatgtcgcttcccttaacagacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtctgacaactgccctgaccaagctggaggaggctgagaaggcggct
gatgagtctgagagaggcatgaaggtcattgagaacagagcctccaaggatgaggagaag
atggagctgcaggagatccagctgaaggaggccaagcacatcgctgaggaggctgaccgc
aaatacgaggaggttgcccgtaagctggtcatcattgagagtgatctggagcgtacagag
gagcgcgctgagctttctgaaggcaaatgctctgagcttgaagaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccagtctgagaagtactcacataaggaggacaag
tatgaggaggagatgaaggtcctcactgacaagctgaaggaggctgagacacgtgctgag
ttcgctgagagatcagtagccaagcttgagaagaccattgacgacttggaagagaaactg
gcacatgctaaagaggagaaccttgatatgcaccagatgctggaccagactctaatggaa
ctaaataacatgtga
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