Salvelinus namaycush (lake trout): 120053952
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Entry
120053952 CDS
T07522
Name
(RefSeq) RNA-binding protein 28-like
KO
K14573
nucleolar protein 4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120053952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snh03009
]
120053952
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120053952
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120053952
NCBI-ProteinID:
XP_038857208
UniProt:
A0A8U1BL85
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All DBs
Position
Sna9:complement(31462922..31471128)
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AA seq
808 aa
AA seq
DB search
MSALTIFVRSLPADASNDRLEEIFSEIGPVKHCFVVKEKGAEKCRGFGYVTYSMVEDAQR
AVREVKDYDGQKINVSVAKKKLNDKKRGTTATAPKDPVPQKEQKSEGGLKKNRRKARLII
RNLSFKCSNEDLKQTFAKFGTVLEANIPLKPDGKMRGFAFVQFKNVLEAGKALNAINLKE
IKGRQVAVDWAVAKDKFVATQPGAKKEEKVAAEKAAPESDSEEEEKVEEDEEEEEKKKKP
VAHSKNNPLYRVSSKPAQQPDSPSEHESEEEDGEDHDAESQESDCDETSDLGSDKDDDED
EDDEDSDSAANRKPLPSDINQGKTIFIRNLSFDTEEEGLEEVLLQYGELKYIKICLHPDT
EHSKGIAFAQFKSKEAAEKCIAAAEDESESGGIRVDGRKLNVVAAVSREDAVKLKDKKVK
THTGTRNIYLAREGLIRSGTKAAEGVPAADMAKRTRFEDLKRTKLRDINVFVSKTRLCVH
NLPKFVDVKQLRQLCLKAAGGGKVVRITECRVMYDKKPERGQVLGRSLGYGFVQFQEHEH
ALKTLRYLNNNPDIYGNTKRPIAEFSLEDGKKLKMKEMRQQYVKEHFKGRGPQGGGKPQS
GGKTGPQRCASKTQSAMVTKEGPAKTQTQSLPSGQDRKDGVPPPQAKTLFHAQTQPQDQT
LFQTQPQGQTLFHAQTQPQGQKQGRQYAGFQTTPVLEHVELEDGKKRRKVLALPSHHGPK
IRARDKGKQQQQPAQLKKPKNRPSRRELQGGTSLEKPTQPRTKSANGAKKRFRSQEDDRF
DNLVEQYKRKLMGGNKTTTIKKNKWFNS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccttacaatattcgtccggagtttgccagcagatgcatctaacgaccgcctg
gaggagatattctctgagattggacctgtgaagcactgctttgttgtcaaggaaaaaggt
gcagagaaatgtcgggggtttgggtatgtcacctactccatggtggaggatgcacagcgc
gctgtgagagaggtgaaagactatgatggacagaagataaacgtgtcggtggccaagaag
aaactaaacgacaagaaaaggggaacaacagccacggcaccaaaagatccagtaccacaa
aaagaacagaaatctgaaggaggcttaaagaaaaacagaaggaaagccagactgatcatc
aggaatctcagtttcaagtgctcgaatgaggatctgaagcagacctttgctaagtttggg
acagttctggaggctaacatcccgctcaaaccagatgggaagatgaggggctttgcgttt
gtccagtttaagaatgtcttggaggcaggaaaggccttgaacgccataaacctgaaagag
atcaaaggaaggcaggtagctgtggattgggctgtggctaaagacaagtttgtcgctact
cagccaggagctaagaaagaggaaaaggttgcagcagagaaggcggcacctgaaagtgac
tctgaagaggaggagaaggtggaggaagatgaagaggaggaggagaagaagaaaaaacca
gtagcacattcaaagaacaatcctctctacagagtcagctctaagccagctcagcagcca
gacagcccatcagagcacgagagcgaagaggaggatggagaggatcatgatgcagagtct
caggagtcagattgcgatgaaacaagtgaccttgggtctgataaagatgatgacgaagat
gaagatgatgaggattctgatagtgcagccaacaggaagcccctcccatcagatattaat
cagggcaaaaccatcttcatcaggaacctgtcgtttgatacggaggaggagggcttagaa
gaggtgttactgcagtatggagaactgaagtacatcaagatctgcctacacccagacact
gaacactctaaaggtattgcatttgctcagttcaagtctaaagaagcagcagagaaatgc
attgctgctgcagaggacgagtcagagagcgggggtatccgtgtggatggtaggaagctg
aacgttgtagcggcggtgagcagagaggacgccgtcaaactaaaggacaagaaggttaaa
actcatacagggaccagaaacatctacctggctagagagggattgatacggtcaggaacg
aaggcagctgagggtgttccagcagcagacatggccaagaggacccgatttgaggacctg
aagcggaccaagctacgggacattaatgtgtttgtgtctaagacccgcttgtgtgtccac
aacctgcccaaatttgtagacgtcaaacaactacgacaactctgcctgaaagctgcaggg
ggtggcaaggtggtccgcattactgagtgcagggtgatgtatgataagaagccggagcgt
ggtcaggtgttaggccggtcgctaggttacggcttcgttcagttccaagaacatgaacac
gctctgaagacacttcgatacctcaacaacaaccctgacatctacggaaacaccaagagg
cccatcgctgagttctctcttgaagatggaaagaagctgaagatgaaagaaatgcgacaa
caatatgtcaaggagcatttcaaggggcggggccctcagggaggagggaagccgcagtct
ggaggcaagactggacctcagaggtgtgcgtctaaaacccagagtgccatggtaacgaag
gaggggccagcgaagacgcagacacagtcgttaccatccggccaggacagaaaggatgga
gtacctcccccccaggccaagaccctgttccatgcccagacccagccacaggaccagacc
ctgttccagacccagccacagggccagaccctgttccatgcccagacccagccacagggc
cagaagcagggccggcagtatgcaggcttccagaccaccccggttctagaacatgtagaa
ctggaggatggaaagaaaagacggaaggttctagccctaccttctcaccatggcccaaag
atcagggcacgtgacaaggggaagcagcagcagcagcctgcccagcttaagaagcccaag
aaccggcccagcaggagagagcttcagggaggaacatcactggagaaacctacacagccc
agaacaaagagcgctaatggggccaagaagcggtttaggagccaagaggatgaccgcttt
gacaacctggttgaacagtacaagaggaaactgatgggcggcaacaagaccacaaccatc
aagaagaacaagtggttcaacagttag
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