KEGG   Salvelinus namaycush (lake trout): 120054041
Entry
120054041         CDS       T07522                                 
Name
(RefSeq) protein NEDD1-like
  KO
K16547  protein NEDD1
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:snh03036]
    120054041
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:snh04812]
    120054041
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     120054041
   Microtubules and associated factors
    gamma-tubulin ring complex
     120054041
Cytoskeleton proteins [BR:snh04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     120054041
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A Beta-prop_WDR35_TULP_N PEP5_VPS11_N WD40_like Beta-prop_SPT8 Beta-prop_LRRK2 PROPPIN KNTC1_N Frtz VPS8_N SdiA-regulated
Other DBs
NCBI-GeneID: 120054041
NCBI-ProteinID: XP_038857335
UniProt: A0A8U1BIY1
LinkDB
Position
Sna9:38958427..38976189
AA seq 698 aa
MEEVTHLVSSGDCVKIWDSASMTVLEQFNPHSNTHPVAQVCWSSNNQYLVSASSIGDKLV
VSSLKSSPIPVLELAEGKKQTRVSLNSTSQYLVSGGLDNSVNIWDLKAKRLHRTLKDHKE
EVTCVSFNGSDSYIASGSTSGDIILHSITTNLSSNAFGHGTNQPIHDLKYSVVKRSLLGS
VSDSGSVVLWDANTQKELHVFDGAHKAPASGLAFSPANDLLFVTVGLDKKIICYDSSSKI
ILRNMCVESPLTAIDFTPDGAGLVVGSTQGRLYLYDLRNLSSPTKTAAAHKTSITSLRFQ
SSQSRHLKSSKIASSKSSSAQTSKRISARLGSTYLPVTTPSSTSNPPSSLPAPHAVERGD
GQAQGTGTHREAEGQLGVDCLPSLDKFSSVGRNSLDIFSPVRDDYKAHRMSGDAPGGIKG
NAISLDMFSREGQQSMEKFSKVGRNSLDIFSPVREDYETHGMTADESNGKKANNLDFLPT
YSGGPPQHKTPLGTLGGGCCYSPLPVFQTPSPIKEELAMPPAPAQTDTQDSKRYEKDSGS
SLEGEATTTPTSSAQTSHSQPAPPFFTPEPGLRTNDVQAQLSYNTPLNGALPIIVPVSLA
VASSLSERIVEAVGAEDGGAPLTSLQIQFIRNMIHETLEDFRDACHRDIVNLQVEMVKQF
YIQLNEIHGLIEKYSVNDSLVEEIEKLREENKRLRDNY
NT seq 2097 nt   +upstreamnt  +downstreamnt
atggaggaggtgacgcatctggtgtcgtccggcgactgtgttaagatctgggactcagcc
tccatgacagttttggaacagttcaacccgcacagtaatacacaccctgtggcccaagtg
tgctggagcagcaacaatcagtatcttgtaagtgccagcagtataggagacaagctggtg
gtatccagtctcaagtcctctcctatcccagtgttggagcttgcagaggggaaaaagcag
acacgtgtgagtctgaactcaacgtcccagtacctagtgagtggggggcttgataactct
gttaacatctgggacctaaaggccaagaggcttcatcgcaccctcaaggaccacaaagag
gaggtgacgtgcgtgtccttcaacggcagtgacagctacatcgcctcgggctccaccagt
ggtgacatcatcctgcacagcatcaccaccaacctgtccagtaatgcctttggacacggc
accaaccagcccatccacgacctgaagtactctgtggttaagcgctcccttctgggcagt
gtgtcagatagcggatcggtggtcctgtgggacgccaacactcagaaggagctgcacgtg
tttgatggagcccacaaggcccccgcctcgggcctggccttctctcctgccaacgacctg
ctctttgtcaccgttggcctggacaagaagatcatctgctatgacagctccagcaagatt
attctccgcaacatgtgtgtggagtccccgttgacggccattgacttcactccagatggg
gcagggctggtagtgggctccacccagggcagactgtacctgtacgacctgcgcaacctc
agctcccctaccaagactgccgctgcacacaagacctccatcaccagcctgcgcttccag
agctcccagagcagacacctcaagtccagtaaaatagcgtccagcaagtcttccagcgcc
cagacaagcaagaggatctcagccaggctgggtagtacctacctaccagtaactaccccc
agctccacctccaatcccccctctagcctgcctgcaccccatgcagtagaaagaggggat
ggacaagcccagggcacaggcacacacagagaggcagagggccagctgggtgttgactgc
ctgcctagtctggacaagttcagcagcgtgggtagaaacagcctggacatcttctccccc
gtaagagacgattacaaagcccacaggatgagtggtgatgctcctggtggaatcaaaggg
aatgcgatcagtttggatatgttctccagagaagggcagcaaagcatggagaagttcagc
aaagtgggacgcaacagtctggacattttctctcctgttagagaggattacgaaacccat
ggaatgactgcagatgaatcaaatgggaagaaagcaaacaatctggacttcctccctacc
tactctggtgggcccccacaacacaagactcccctgggcacccttggaggagggtgctgt
tacagccccctgcctgtcttccagaccccttcaccaatcaaagaggagctagccatgcct
cctgcaccagcacagacagatacacaggactcaaaaaggtatgagaaggacagtggttcc
agtctggagggtgaagccacaaccacgcccacgtcatcagcccagacctcacacagccaa
ccagcacctccgttcttcacccctgaacccggcctgaggaccaatgatgtgcaggcccag
ctgagctacaacacgcccctaaatggtgcgctgcccattattgtaccagtgtctttggca
gtggcatcctcgctatcagagagaatagtggaggctgttggagcagaggatggaggcgct
cccctcacatctctgcagatccagttcatccgcaacatgatccatgagaccctggaagac
ttcagggacgcctgccaccgagacatagtgaacctccaggtggagatggtcaaacagttc
tacattcagctgaacgagatccatggtctgatcgagaagtactctgtcaatgactcgctg
gtggaggagatcgagaagctgagggaggagaacaagcgactccgagacaattactga

DBGET integrated database retrieval system