Salvelinus namaycush (lake trout): 120054041
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Entry
120054041 CDS
T07522
Name
(RefSeq) protein NEDD1-like
KO
K16547
protein NEDD1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120054041
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120054041
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
120054041
Microtubules and associated factors
gamma-tubulin ring complex
120054041
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
120054041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_IFT122_1st
eIF2A
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
WD40_like
Beta-prop_SPT8
Beta-prop_LRRK2
PROPPIN
KNTC1_N
Frtz
VPS8_N
SdiA-regulated
Motif
Other DBs
NCBI-GeneID:
120054041
NCBI-ProteinID:
XP_038857335
UniProt:
A0A8U1BIY1
LinkDB
All DBs
Position
Sna9:38958427..38976189
Genome browser
AA seq
698 aa
AA seq
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MEEVTHLVSSGDCVKIWDSASMTVLEQFNPHSNTHPVAQVCWSSNNQYLVSASSIGDKLV
VSSLKSSPIPVLELAEGKKQTRVSLNSTSQYLVSGGLDNSVNIWDLKAKRLHRTLKDHKE
EVTCVSFNGSDSYIASGSTSGDIILHSITTNLSSNAFGHGTNQPIHDLKYSVVKRSLLGS
VSDSGSVVLWDANTQKELHVFDGAHKAPASGLAFSPANDLLFVTVGLDKKIICYDSSSKI
ILRNMCVESPLTAIDFTPDGAGLVVGSTQGRLYLYDLRNLSSPTKTAAAHKTSITSLRFQ
SSQSRHLKSSKIASSKSSSAQTSKRISARLGSTYLPVTTPSSTSNPPSSLPAPHAVERGD
GQAQGTGTHREAEGQLGVDCLPSLDKFSSVGRNSLDIFSPVRDDYKAHRMSGDAPGGIKG
NAISLDMFSREGQQSMEKFSKVGRNSLDIFSPVREDYETHGMTADESNGKKANNLDFLPT
YSGGPPQHKTPLGTLGGGCCYSPLPVFQTPSPIKEELAMPPAPAQTDTQDSKRYEKDSGS
SLEGEATTTPTSSAQTSHSQPAPPFFTPEPGLRTNDVQAQLSYNTPLNGALPIIVPVSLA
VASSLSERIVEAVGAEDGGAPLTSLQIQFIRNMIHETLEDFRDACHRDIVNLQVEMVKQF
YIQLNEIHGLIEKYSVNDSLVEEIEKLREENKRLRDNY
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacgcatctggtgtcgtccggcgactgtgttaagatctgggactcagcc
tccatgacagttttggaacagttcaacccgcacagtaatacacaccctgtggcccaagtg
tgctggagcagcaacaatcagtatcttgtaagtgccagcagtataggagacaagctggtg
gtatccagtctcaagtcctctcctatcccagtgttggagcttgcagaggggaaaaagcag
acacgtgtgagtctgaactcaacgtcccagtacctagtgagtggggggcttgataactct
gttaacatctgggacctaaaggccaagaggcttcatcgcaccctcaaggaccacaaagag
gaggtgacgtgcgtgtccttcaacggcagtgacagctacatcgcctcgggctccaccagt
ggtgacatcatcctgcacagcatcaccaccaacctgtccagtaatgcctttggacacggc
accaaccagcccatccacgacctgaagtactctgtggttaagcgctcccttctgggcagt
gtgtcagatagcggatcggtggtcctgtgggacgccaacactcagaaggagctgcacgtg
tttgatggagcccacaaggcccccgcctcgggcctggccttctctcctgccaacgacctg
ctctttgtcaccgttggcctggacaagaagatcatctgctatgacagctccagcaagatt
attctccgcaacatgtgtgtggagtccccgttgacggccattgacttcactccagatggg
gcagggctggtagtgggctccacccagggcagactgtacctgtacgacctgcgcaacctc
agctcccctaccaagactgccgctgcacacaagacctccatcaccagcctgcgcttccag
agctcccagagcagacacctcaagtccagtaaaatagcgtccagcaagtcttccagcgcc
cagacaagcaagaggatctcagccaggctgggtagtacctacctaccagtaactaccccc
agctccacctccaatcccccctctagcctgcctgcaccccatgcagtagaaagaggggat
ggacaagcccagggcacaggcacacacagagaggcagagggccagctgggtgttgactgc
ctgcctagtctggacaagttcagcagcgtgggtagaaacagcctggacatcttctccccc
gtaagagacgattacaaagcccacaggatgagtggtgatgctcctggtggaatcaaaggg
aatgcgatcagtttggatatgttctccagagaagggcagcaaagcatggagaagttcagc
aaagtgggacgcaacagtctggacattttctctcctgttagagaggattacgaaacccat
ggaatgactgcagatgaatcaaatgggaagaaagcaaacaatctggacttcctccctacc
tactctggtgggcccccacaacacaagactcccctgggcacccttggaggagggtgctgt
tacagccccctgcctgtcttccagaccccttcaccaatcaaagaggagctagccatgcct
cctgcaccagcacagacagatacacaggactcaaaaaggtatgagaaggacagtggttcc
agtctggagggtgaagccacaaccacgcccacgtcatcagcccagacctcacacagccaa
ccagcacctccgttcttcacccctgaacccggcctgaggaccaatgatgtgcaggcccag
ctgagctacaacacgcccctaaatggtgcgctgcccattattgtaccagtgtctttggca
gtggcatcctcgctatcagagagaatagtggaggctgttggagcagaggatggaggcgct
cccctcacatctctgcagatccagttcatccgcaacatgatccatgagaccctggaagac
ttcagggacgcctgccaccgagacatagtgaacctccaggtggagatggtcaaacagttc
tacattcagctgaacgagatccatggtctgatcgagaagtactctgtcaatgactcgctg
gtggaggagatcgagaagctgagggaggagaacaagcgactccgagacaattactga
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