Salvelinus namaycush (lake trout): 120054051
Help
Entry
120054051 CDS
T07522
Symbol
kcnn1b
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1b
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120054051 (kcnn1b)
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
120054051 (kcnn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Det1
DUF6775
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
120054051
NCBI-ProteinID:
XP_038857347
UniProt:
A0A8U1BQ97
LinkDB
All DBs
Position
Sna9:15819483..15824812
Genome browser
AA seq
550 aa
AA seq
DB search
MPSLSKSSSPLLPDTVVTSAKYSGDVGRPLSSLGASPPNLSELDSERQEPHQTLQRSVLE
EVFSKGFSENNSKANSEGGRDTPQKRTKDIGYRLSQRRALFGKRKQLSDYALIFGMLGIV
IMVMETELSWGVYTKESSYSFSLKCLISLSTAILLGLIVMYHAREIQLFMVDNAADDWRI
AMTYERIFLVLLELLVCAIHPIPGQYVFTWTARLAFTYMPSVTDADVDIVLSIPMFLRLY
LISRVMLLHSKLFTDASSRSIGAINKINFNTRFVMKTLMTICPGTVLLVFSVSCWIIASW
TVRVCERYHDTQEVTSNFLGAMWLISVTFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTA
LVVAVVARKSELTRAEKHVHNFMMDSQLYKRVKNTAANVLRETWLIYKHTKLVKKIDHAR
VRKHQRKFLQAIHQLRRVKMEQRKLIDQANTLVDLAKTQNMMYDLVSDLQRRSKELDRRI
GSLDDKLDSILVSLETLPSLVSQAVTQQHRDFLDGLAPRVQTSSKGSEDNWVPARCKRSP
DTAPQTIPYS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgccttccctgtccaagagcagtagcccactccttcctgacacagttgtgaccagcgct
aaatacagtggggatgttgggagacccctgagcagccttggagcttcgccgccaaacctt
tcagagctggactcagagagacaagagccccatcagacactccaaaggtctgtcttggag
gaggtgttctcgaaaggcttcagcgagaacaacagtaaggccaacagcgaaggaggaaga
gacacgccacagaagaggaccaaggacattggctatagattaagccagcgtagggcactc
tttggaaagcgcaaacagttgagcgactatgccttgatctttgggatgcttgggatcgtc
atcatggtgatggagacggaattgtcctggggggtttacacgaaggaatcctcatactca
ttctctctgaaatgccttatcagcctctcaactgctatattgctcggactaatcgtgatg
taccatgcacgggaaatacagctcttcatggtggataatgcagctgatgactggaggatt
gccatgacgtatgagcggatcttcctagttctgctggagctgctggtctgtgccatccac
cccatcccgggccagtatgtcttcacctggacggcccggctggccttcacctacatgccc
tcagtaactgatgccgacgtggacatcgtcctctccatccccatgttcctcaggctctac
ctgatcagtcgcgtcatgctgctgcacagcaagctcttcacagacgcctcgtcgcgcagc
atcggcgcaatcaacaagatcaacttcaacacgcgcttcgtcatgaagactctcatgacc
atctgccccggcaccgtgctgctggtcttcagtgtctcctgttggatcattgcgtcatgg
acagtgcgtgtctgtgagagatatcatgacacacaggaagtgaccagtaacttccttggg
gccatgtggctcatctctgtcacctttctctccattggttatggagacatggtccctcac
acttactgtggaaagggtgtgtgtctgctgactggaatcatgggggccggctgcactgcc
ctggtggttgctgtagttgccaggaagtcagagttgactagagctgagaagcacgttcac
aacttcatgatggactctcagctctacaaacgagtgaaaaacacagctgccaatgtactc
agggagacatggctgatctacaaacacacgaaattagtcaagaagatcgatcacgccagg
gtacgcaaacatcagcggaaattcctgcaagccattcaccaattgcgcagagtcaaaatg
gaacagaggaaactcatcgaccaggctaatacacttgtggatctagccaagactcagaac
atgatgtacgacctggtgtctgatctgcagcggcgcagcaaggagctggataggaggatc
ggtagtctggacgacaaactggactccatcctagtcagtctggagacactgcccagcctg
gtctcccaggccgtcacacagcagcacagggactttctggatggcttggccccccgtgtt
cagacatcctcgaagggctccgaggacaattgggttcccgccaggtgcaaacggtccccc
gacactgcaccacagaccataccttacagctga
DBGET
integrated database retrieval system
