Salvelinus namaycush (lake trout): 120054067
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Entry
120054067 CDS
T07522
Name
(RefSeq) liprin-beta-1-like isoform X1
KO
K27096
liprin-beta
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120054067
Membrane trafficking [BR:
snh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120054067
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
PUMA_CC
SAM_PNT
DUF16
Phage_H_T_join_2
Motif
Other DBs
NCBI-GeneID:
120054067
NCBI-ProteinID:
XP_038857368
UniProt:
A0A8U1ELA5
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All DBs
Position
Sna9:40599582..40684367
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AA seq
965 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKSMDYSNGLFDCQSPTSPFLGSLRALHLLEDLRGVLE
LMDTEEREGLRCQIPDATADSLVDWLQQGHLMSNGHHISMGGDLYQERLSRLEGDKESLV
LQVSVLTDQVEAQGEKIRDLDMCLDEHREKLNATEEMLQQELLCRTTLETQKLELMAEVS
NLKLKLNSFEKDILHFDFRDSEYMGLEINELRYKVTEMESERLQYEKKLKSTKEELVMLR
RQLEGRDREVRRLHGDTGFRAITPGGMDSGDRVLHPPDVEVQRMKKAVESLMAANEEKDC
KIEELRQSLQRYKKVQDMVISVQEKKDKTKDGESDESNSDNSLSVMSTTTTSVALESERH
ALAGVEEVAGKSPDELETHYGATEVPSPTTSPTGQSACALQSVPELDQAEPERSLHVPKS
ASQENLYVSNSEKITLVIDEKPTENKAVEEISKISERPPKSPSSSRSEDDSFGTKKARSS
FGRGFFKIKGGKRTASAPNLAETVREGGTDHLDLAGLPQRSAISDSTNTLTSVTSTTSPE
GKKKSRGIKALFGKLRRSQSTTFNLDDNLSEPVEFKRGGVRATAGPRLGWSRDLQQSPNT
DLDTPFARWSKEQVCDWLQEQGLGLYLNMAHVWISSGQTLLQASQQDLERELGIKHPLHR
KKLQLALQALGSEEDDNKGKLDYNWVTRWLDDIGLPQYKTQFDEGRMDGRMLHYMTVDDL
LSLKVGSVLHHLSIKRAIQVLRLNNYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLRS
VDLAEYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLVGSEA
QGLKQDCLENPDYTLLTATAKVKLRKMTFGSFGSLRKKRQDESEEYVCPMDVEMPKGRSF
QKGYELYEDDLDQLEQMEDSEGTVRQIGAFSEGIQNLTSMLKDDEFFKEISNSPNPSVTD
DDSNV
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggcagcagctttggagcagatggatgggataata
gcaggctccaagtccatggactactccaacggcctgtttgactgccagtcaccaacctct
cccttcttgggaagcctgcgggcgctgcacttgctggaggacctccggggcgtgctggaa
ctgatggacaccgaggagagggagggcctgcgctgccagatccctgacgccaccgcagac
agcctggtggactggctgcagcagggacacctgatgtccaatggccaccacatttccatg
ggtggtgacctctaccaggagagactgtctcgactggagggtgacaaggaatccctggtg
cttcaggtgagtgtgttgacagaccaggtggaggcgcagggggagaagataagggacttg
gacatgtgtctggatgaacaccgggagaaactgaacgcaactgaggagatgctacaacag
gagctcctatgcagaacgactctagagactcagaaactggaactaatggctgaggtgtcg
aacttgaaactgaagctgaactcatttgagaaggacatactgcactttgacttcagggac
agtgagtacatgggtctggagattaatgagctgaggtacaaagtgactgagatggagagt
gaaagactacagtatgagaagaaactgaaatccactaaggaggagctggtgatgctgagg
aggcagctggagggaagggacagagaggtgaggaggttacacggcgatactgggttcaga
gccatcaccccgggtggcatggacagtggagacagagttcttcaccctccagatgtggaa
gtgcagagaatgaaaaaagcggtggagtcactgatggcagccaatgaggagaaggattgt
aagattgaggagctgaggcagtcgctgcagcgctacaagaaggtccaggacatggtgata
tcagtgcaagagaagaaagacaaaaccaaagatggtgagagtgatgagagtaacagcgac
aactccctctctgtgatgtcaacgacaaccacctcggttgccctggagtcggagaggcac
gcgctagctggagtcgaggaagtagcagggaagagcccagacgagctggagacgcactat
ggagctactgaagtgccttcgccaacaaccagccctacaggccagtcagcctgcgctcta
cagagcgtgccagagcttgaccaagctgaacctgagaggtccctgcatgtcccaaagtca
gcgagtcaggaaaacttgtatgtcagcaacagtgaaaagattacattggtgattgacgaa
aagccaacagagaataaggcggtggaggaaatcagtaagatcagcgagcgcccgcccaag
tctccctcttcatctcgctcagaggacgacagcttcggtaccaagaaggctcgctcatcc
tttggccgaggcttcttcaagatcaaggggggcaagaggacagccagcgcccctaacctg
gctgagaccgtgcgagaggggggcactgaccatctggacctggccgggctaccccagagg
tcagccatcagcgacagcaccaacacactgaccagtgtgacctccactacctctcccgag
ggcaagaagaagtccaggggaatcaaggcactctttggaaagctgaggagaagtcagtcc
accacgttcaacctggatgacaacctatcagagccggtcgagttcaagagaggcggagtc
cgggccacagcaggacccagactgggatggtcccgtgacctacagcaatcacccaacact
gacttggacaccccgtttgcccgctggtccaaggagcaggtgtgtgactggctgcaggag
cagggactggggctctacctgaacatggctcacgtgtggatctcttctggacagactctg
ctgcaggcctcacagcaggatctagagagggagctgggcatcaaacacccgctgcacagg
aagaagctccaactggccctgcaggctctgggctctgaggaggatgacaataagggcaaa
ctggactacaactgggtgaccaggtggctggatgacattggcctgcctcagtataagacc
cagttcgatgaggggaggatggacggccgcatgctgcactatatgacagtagatgacctg
ttgtctctgaaggtgggcagtgtgctccaccacctcagcatcaagagagccatccaggtg
ctacgcctcaacaactacgagcccaactgcctgcgccgacggccctccgatgagaacaac
atcacaccagcagagatctcccagtggaccaatcacagagtaatggagtggctgagatca
gtagacctggcggagtacgcccccaacctgaggggcagcggcgtgcacgggggactcatg
gtgctggagcctcggttcaacgtggagaccatggccctgctgctgaacattccccccaac
aagaccctgctgcggaggcacctggccacccacttcaacctgctggtgggctctgaggcc
caggggctcaaacaggattgtctggagaaccccgactacaccctgcttacagccaccgcc
aaggtcaagctgaggaagatgacgtttgggagctttggcagcctgagaaagaagaggcag
gatgagagtgaggagtatgtctgccccatggatgtggagatgccaaagggacgtagcttc
cagaaaggctatgagctctacgaagacgatctggaccagctagagcagatggaggactca
gagggaactgtgaggcagattggagccttctctgagggcatccaaaacttgacgagcatg
ctgaaagatgatgaattcttcaaagagatctctaactctcccaaccccagcgtaacagat
gacgattccaacgtttga
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