Salvelinus namaycush (lake trout): 120054101
Help
Entry
120054101 CDS
T07522
Symbol
fgd4a
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 4a isoform X1
KO
K05723
FYVE, RhoGEF and PH domain containing 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120054101 (fgd4a)
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
120054101 (fgd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
IQ_SEC7_PH
FYVE_2
PH_13
PH_6
RHG20_PH
HEF_HK
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
120054101
NCBI-ProteinID:
XP_038857414
UniProt:
A0A8U1BY81
LinkDB
All DBs
Position
Sna9:43587359..43648164
Genome browser
AA seq
850 aa
AA seq
DB search
MERQCTTDRHGKTQPHWRGAYSEKKGKPSCFHSKNTDEEACVGVKIEHAKALSSSPHSAR
VSRTGLCGKSPSEKSRGGVNGRSSDSRPSLQPKPQVPPKPAHLQSPVTKSAAHPPGRVER
ALLRATMEERRGGAMVAKSREKPSKVLNLINHFEENSQSETKEGSPLKQLSKSPLCSPAH
RVNQRQSESEQQDNNSVDSGSVPRTQRDAHKQATNGMLTQMDRDRESGSPLRKDTALENG
DMGDGSMGITPLLHTQRPILGRTVDLQEETTNMNKGSKEEGIVEEKVPETNEQKLYKIAT
ELLKTERAYVTRLNLLDQVFCAKLTEEALKGTFPVDVVKNIFSNISSINTFHNQFLLPDL
EKRMGEWESTPRLGDILQNLTPFLKMYAEYVKNFDNAMELLKQWTDRSPQFKAIIQDIQS
QEACGSLTLQHHMLEPVQRVPRYEMLLKDYLKKLPQDDPDRRDAEKSLDIIAMAATHSNS
AIRKSENLKKLLEIYEMLGEEEDIVNASNEFIKEGHILKLAARNTSAMERYLFLFNNMLL
YCVPKFSLGGAKYTVRTRIGIEGMKVLETINEDYPHTFQVSGKERTLELQVSSEQDKDNW
IKAFKETIEIFHQKNETFKSASKDVEEVSTAELGKRAPRWIRDKEVTMCMKCKEPFNALT
RRRHHCRACGYVVCWKCSDNKVALEYDSNKINKVCKDCYSILTGEEKAEGKKKGILEIEA
AQFSGSSIICGFLQHCEKNKPWGKVWCVIPEKEALVLYLYGAPQDVKAQSSIPLLGYSVE
DSPRPADPPASFRLSQSKSVHSFVAESEELKQRWLKVIRVAVTGEVPESQMPNDATANAT
DAQETSSDST
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcagtgtactacggacaggcatgggaaaacccagccacactggagaggagct
tactcagaaaagaaaggcaagcccagctgtttccattccaagaacactgatgaggaggcc
tgtgtcggggtgaagatcgaacacgctaaagctctaagcagcagcccccacagtgcaagg
gtcagtcggacaggtctgtgtgggaagagtcccagtgagaagagcagggggggtgtcaat
ggaagaagttcggacagcaggccctcactgcagcccaaaccacaagtgcctccgaagcca
gcccacctccagagcccggtgacgaagtccgccgcccacccgccagggcgtgtggagaga
gcactcctcagagccaccatggaggagagaagaggaggggcgatggtggcgaagagccgg
gagaaaccctccaaagtcttgaacctcatcaaccacttcgaggagaacagccagtcagaa
accaaggagggctcaccactcaagcagctcagcaagtcgcccctctgcagtccggctcac
cgggtcaaccagagacagtcagagtccgagcagcaggacaacaactcggtggattcaggc
tctgtcccgagaacgcagcgggatgcccacaaacaggcaactaacgggatgctaacccaa
atggacagagacagggagagtgggtcccccctgaggaaagacactgccctggagaatggg
gacatgggggacgggagcatgggcatcactcccctcctccacacacaaagacccatactg
gggaggacagtggacctacaggaggagaccaccaacatgaacaaaggaagcaaggaggag
ggcattgtggaggagaaggtaccggagaccaatgaacaaaagctgtacaagatcgctact
gagctcctgaagacagagcgggcctacgtcacgcggctcaacttgctggaccaggtgttc
tgtgccaagctgacggaggaagctctaaagggcacgttcccagtggacgtggtgaagaac
atcttctccaacatctcctccatcaacaccttccacaaccagttcctcctgcctgacctg
gagaaacgcatgggagaatgggagtctacccctcgcttgggggacatcctgcagaatctc
acgcccttcctgaagatgtacgctgagtatgtgaagaactttgacaatgcaatggagctg
ctgaaacagtggacggaccgctcgccacagttcaaagccatcatccaggacatacagagc
caggaggcgtgtggcagtctgacgctccagcaccacatgttggagccggtacagagagtt
ccccgctacgagatgctgctcaaagactacctgaagaaactgcctcaggacgaccccgac
cgccgagacgcagagaagtcattggacatcatcgccatggcagccacacactccaacagt
gccattcgaaaatctgagaatctgaagaagctgctggagatctatgagatgctgggggag
gaggaggacatcgtcaatgcctccaatgagttcatcaaggagggacacatcctgaagctg
gctgccaggaacacctcggctatggagagatacctcttcctgttcaacaacatgctgttg
tactgcgtgcccaaattcagcctgggaggagccaagtacacggtgcgcacccgcatcggc
atcgagggcatgaaggtgctggagaccatcaacgaagactaccctcacaccttccaggtg
tctggcaaggagaggactctggagctgcaagtcagctccgaacaagacaaggacaactgg
ataaaggctttcaaggaaactattgagatcttccatcagaagaacgagacgttcaagtcc
gcctccaaagacgtggaggaagtgtcaacggcagagctggggaaacgtgctcctcgctgg
attcgggacaaggaggtgacaatgtgtatgaagtgtaaagagcccttcaatgcgttaaca
cgacggagacaccactgtcgagcctgcggatatgttgtgtgttggaagtgctcagacaat
aaagtggccctggagtacgacagcaacaaaattaacaaggtgtgtaaggactgctactcc
atcctgactggagaggagaaggccgagggcaagaagaagggcattctggagatcgaggcg
gctcagttctccggaagcagtatcatttgtggcttcctgcagcactgtgagaagaacaag
ccctgggggaaggtgtggtgcgtcatcccagagaaggaggcattggttctctacctctac
ggagccccacaggatgtgaaggcccagtcctctatccctctgctgggctactctgtggag
gacagcccccggcctgccgaccctccagccagcttccgtctgtcccagtccaagtctgtt
cacagcttcgtggccgagagcgaagagctgaaacagcgctggctcaaggtgatccgggtg
gctgtgactggggaggtgccagagtcccagatgcccaacgatgccactgccaacgccacg
gatgcccaagagacaagctcagacagcacctaa
DBGET
integrated database retrieval system
