KEGG   Salvelinus namaycush (lake trout): 120054138
Entry
120054138         CDS       T07522                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04510  Focal adhesion
snh04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120054138
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120054138
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C ATG17_like
Other DBs
NCBI-GeneID: 120054138
NCBI-ProteinID: XP_038857480
UniProt: A0A8U1C058
LinkDB
Position
Sna9:46711460..46745785
AA seq 1789 aa
MFIFQIATMLSAGACVLAQVGTPEFSDVCTEGSCYPATGDLLIGRAHQLSTNSTCGLHRP
ETFCIVSHLQDEKKCFLCDSTDVYVKSVVNTTTGHRVENVVTTFAPNRLKTWWQSENGLE
KVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKKWQVYRYFAYDCAAAYPAISP
GPMQKVDDIICDSHYSDIEPSTEGEVIFRVLDPAFRIEDPYSPRIQNMLKITNLRVKFTK
LHTLGDNLLDSRMEIKEKYYYAVYDMVVRGNCFCYGHASECAPVDGAGAGDGVEGMVHGH
CMCNHNTMGLNCEKCQDFYHELPWRPAKGRNTNACKKCNCNQHSGSCHFDMAVYVSTGNV
SGGVCDECQHNTMGHNCEQCKPFYYQHPERDIRDPSICEPCNCDPVGSLNGGICDRMTDV
SSGLITGQCRCKPNVEGERCDQCQQAHYGLGDHPLGCLACTCNTLGTVPGGSPCNTDSGD
CFCKSLVTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGALNNDCSQETGQCACREHMFGR
RCDQVESGFYFIALDHYTYEAEDAKFGPGLTVVQRPRPQDRSPTWTGIGFVNVPEGAYLE
FSIDNIPHSMEYDVLIRYEPQLPDQWEEVLMTVMRPSLISADSRCANNMPDDDNQMISLH
PGSRYVVLPRPVCFEAGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEMFTGS
VGSDVATNSAWDTFQRYRCLENSQSVVKTPSTDICRNFIFSVSALLHQGAKACQCDPQGA
LSTVCAASGGQCQCRPNVVGRNCDKCAPATYLFGPSGCRPCDCNPQGSEDAFCHEATGQC
VCIPGAYSRQCDRCLPGHWGFPNCRLCTCNGHTEQCDPYSGKCLGCREQTTGHNCERCLD
GYYGDPVLGSGDHCRLCMCPDGPGSGRQFAGGCYRGLDSPYQVFCICSPGYRGARCEECA
PGYYGNPHENGGQCQPCQCNNNIDMLDQESCNARTGECLKCLYHTEGQGCHSCKLGYYGD
ALTQNCRKCVCNHLGTNPATCPVVGDCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMASE
TGCDACDCDPNHSFGTSCNELSGQCSCKPGFGGKTCRECRELFWGEPEVKCNACDCDPRG
IAEQQCHKANGHCVCVEGVSGPRCDVCIRGYSGTFPYCERCHQCFADWDLVVGQLTNQTH
RLVNKVNTIKASGITGPYKHTIDNMEQSAGAIRTILAQNPATQPLSEIQQLLEQATDLME
KMSNKLNLTEEALAQVSSDDNSTNTKLDSLKEDTQKLDRTVKDLLDQVEFIKNTDIRGAT
DSVTKYYQQSLAADARANASTSGPGNPVESSAILRQATEDKMNDTREEFHRRQEEHAKRL
DDLAGQLETLDLSELSVKTCGSPADEACGDSPCGGLSCVDSEGNRRCGGEGCDGLVTLAN
NAWQKAKDFDQEILTAMEEVDKLAKMVSEAKVKADEAKLSAQNVLLKTNGTKQRVDQSNE
ELRSLIRQIRDFLTQDAADLESIEAVANEVLAMQMPTTPAQLQTLTDEIKKRVGDLAHVE
TILNQSSDDIQRAESLLEQARRVSKEATNVRDTAEMVKQVLEEAERAQSAAAKAIKQATT
DIKGTNDLLTSVESETADSEYKLNNATQRLLRLERDVTLLREKTLNTSLSSEQTEKDTES
INKVAEQVKKDLDSELKDKYSTVEDLITQKAGGVANAKKRAELLQQEAKDLLLQASDKLQ
LLKDLEKSYEDNQKTLEHKANQLVDLEKSIKELLQEISHKVTVYSTCLF
NT seq 5370 nt   +upstreamnt  +downstreamnt
atgtttatatttcagattgcgaccatgctatccgcaggggcgtgcgtccttgcccaggta
ggcacacccgagttcagcgatgtatgcacggaggggagctgctacccggctaccggagac
cttctcattggcagagcacaccaactctccaccaactccacatgtggcctccaccggccc
gagacgttctgtatcgtcagtcatttacaggatgagaagaaatgctttttgtgtgactcc
accgacgtctacgtcaaaagcgtggtgaacaccaccaccggccaccgggtggagaacgtc
gtgaccacattcgcccccaaccgcttgaaaacctggtggcagtcagagaatggtcttgag
aaagtgaccatccagctgaacttggaggcggagtttcatttcacccacctcatcatgacc
ttcaagaccttccggcctgctgctatggtgatcgagcgctcggctgactttgggaagaaa
tggcaggtgtaccgctactttgcatacgactgtgcggcggcataccctgccatatccccg
gggcccatgcagaaagtggatgacatcatctgcgattcgcattactccgacatagagccg
tcaacagagggagaggtcattttccgggttttggatccagctttccgtattgaagatccc
tacagccccagaatccaaaacatgttgaagatcaccaacctgagggtgaagttcaccaag
ctgcacaccctgggagacaacctgctggactcccgcatggagatcaaggagaagtactac
tacgctgtctacgacatggtggtccggggtaactgcttctgctacggacacgcctccgag
tgcgcccccgtcgacggggctggggctggggatggagtggagggcatggtccatggccac
tgtatgtgcaaccacaacaccatggggctaaactgtgagaagtgtcaggacttctaccac
gagctgccctggagaccagcaaagggacgcaacaccaacgcctgtaaaaagtgtaactgt
aaccagcactcaggctcgtgtcacttcgacatggcagtttacgtctctacgggtaatgtg
agcggcggcgtgtgtgacgagtgccagcacaacaccatgggtcacaactgtgaacagtgc
aagcctttctactaccagcacccagagagggacatccgcgaccccagcatctgtgaacca
tgtaactgtgatccggtgggctccctgaacggcgggatctgtgacaggatgactgatgtg
tcgtctggactgatcactggccagtgtcgctgcaaacccaatgtggagggagagcgctgt
gaccagtgccagcaggcccactatggcctgggtgaccaccctctgggctgcctggcctgc
acctgtaataccctggggacagttcctggagggagtccgtgtaatacagactcaggagat
tgtttctgcaaaagcctggtcacagggagagactgtgaccagtgtatgcctcagcactgg
gggctcagcaatgatatggatggctgcagaccatgtgactgtgacctgggtggagccctc
aataacgactgttctcaggagactggccagtgtgcgtgtagagaacacatgtttggccgg
cgctgtgaccaggtggagtcaggcttctacttcatcgccctggaccactacacctacgag
gccgaggacgccaagtttggacctggtttgacagtagtgcagagacctcgcccgcaggac
cgtagccccacctggacagggataggttttgtcaacgttcccgagggggcctacctggag
ttctctattgacaacatccctcactccatggagtacgacgtcctcatccgctacgagcct
cagttaccggaccagtgggaggaggtgttgatgacggtgatgcggcccagtttgatttca
gcagacagtcgctgtgccaacaacatgcctgatgacgacaaccagatgatatcccttcac
cccggatcacgatacgtggtgctccccagaccagtgtgtttcgaggcagggatgaactac
actgttcgtctgagcctgcccctctactctgcactcagtgacgtccagtccccatataca
cttatcgactcgattgtgctaatgccccactgtaagaacctggagatgttcactggttct
gtgggaagtgacgtggccaccaacagtgcctgggacacgttccagcgttaccgctgtctg
gagaacagccagagcgtagtgaagaccccgtccacagacatctgccgtaacttcatcttc
agcgtatctgctctgctgcaccagggagctaaagcatgccagtgtgacccgcagggcgcc
ctcagcacggtgtgtgctgccagcggcgggcagtgccagtgtcgccccaacgtggtaggc
aggaactgtgacaagtgtgcccctgccacctacctgtttggacccagcggctgcagaccc
tgtgattgcaatccccagggatcggaggatgcgttctgccacgaggccacaggccagtgt
gtgtgtatccccggggcatacagccgtcagtgtgaccgctgtctgccaggtcactggggc
ttccccaactgtcgcctctgcacctgcaacggccacacagagcagtgcgacccctactcc
ggaaaatgcctgggctgccgagaacagaccaccggacacaactgcgagaggtgtctggat
ggttactatggcgaccccgtcctgggttcaggggaccattgtcggctctgtatgtgtccg
gatgggcccggaagcgggcgacagtttgccggtggatgttaccgcggtctggactcccct
taccaggtgttctgtatctgcagccccgggtacagaggtgccagatgtgaggagtgtgcc
ccaggttactatggaaacccccatgagaacggcgggcagtgccaaccctgccagtgcaac
aacaacattgacatgctggaccaggagtcctgtaatgccaggacgggtgaatgtctcaaa
tgtctctatcacaccgagggtcagggctgccacagctgcaagctgggttactatggagat
gccctcacacaaaactgcagaaagtgtgtttgtaaccacctgggcaccaatccagccacg
tgcccagtggtgggtgactgccactgtgatctgggcagcgggcagtgccagtgtctaccg
aatgtggtgggtcagcactgtgaccagtgtgcccctgacacctggaacatggccagcgag
acgggctgcgacgcctgcgactgtgaccccaaccactcatttgggacttcctgcaatgag
ctgagtggccaatgctcctgtaagcctggctttgggggtaaaacgtgtcgggagtgcaga
gagctgttctggggagaacctgaagtgaaatgcaacgcatgtgactgtgacccgcgaggc
attgccgagcagcagtgccacaaggccaacggtcactgcgtgtgcgtggagggcgtgtct
ggtccccgctgtgacgtctgcatccgtggctactctggcaccttcccctactgcgaacgc
tgccaccagtgcttcgccgactgggacctggtcgtgggtcagctgaccaatcagacccac
aggctggtcaacaaggtgaacaccatcaaggccagcggcatcaccggaccctataaacac
accatagataacatggagcagagcgccggggccataagaactatcctggcccagaacccg
gctacccagccactgtcagagatacagcagctactggagcaggccacagatctaatggaa
aagatgagcaacaagctgaacctcactgaggaggcgctggcccaggtatcatctgatgac
aacagcaccaacaccaaactggactcactcaaagaggacacccagaagctggatcgcact
gtcaaggatctgctggaccaagtggagttcatcaagaacactgacattcggggagcgaca
gacagtgtcaccaagtactaccagcagtctctggctgcagatgctcgcgccaacgcctcc
actagtggcccaggcaaccctgtggagagctctgccattttacggcaagccacagaggac
aagatgaacgacaccagggaggagttccacaggaggcaggaagaacacgccaagagactg
gacgacctggcaggacaactggagacactggacttatcagaactcagcgtgaagacgtgt
ggcagcccagctgatgaggcgtgtggggactctccgtgcggggggctgagctgtgtggac
tccgaggggaacaggaggtgcggtggcgaggggtgcgacggtctggtcaccctggccaat
aacgcctggcagaaggccaaggactttgaccaggagatcctcacggccatggaggaagtg
gacaagctcgccaaaatggtgtcggaggccaaggtgaaggcggatgaggctaagctgagt
gcccagaacgtgctgctgaagaccaacggtaccaagcagcgtgtggaccagagcaacgag
gagctgcgcagcctcatccgacagatcagagacttcctcacacaggatgcagcggacctg
gagagcattgaggcagtggccaacgaggtgctggccatgcagatgcccaccacaccagcc
cagctccaaaccctgacagacgagatcaagaagagagtaggagacctagcccacgtggag
accatccttaaccagagctccgacgacatccagagagccgagagcctactggagcaggca
cgcagagtcagtaaagaggcgacaaacgtgagagacacagcagagatggtgaagcaggtt
ctagaggaggctgagcgtgcccagagcgcagcggccaaggccatcaaacaggccaccacc
gacatcaaaggcaccaatgacctcctgacctcagtggagtcggagacagcggactcggag
tacaagctgaacaatgccacccagaggctgctgcggttagagcgagacgtcacgctgctc
agagagaagacactgaacacctcactcagctctgaacaaactgaaaaagacacagagagc
atcaacaaagtggctgagcaggtcaaaaaggacctggactcggagctgaaggataagtac
agcaccgtggaggacctgatcacacagaaggccgggggcgtggccaacgccaagaagagg
gcggagcttctacagcaggaagccaaagacctgctgctacaggccagcgacaagctgcag
ctactgaaagatttagagaagtcgtatgaggacaaccagaagactttggaacacaaggcc
aaccagttggtggatctggagaagtccatcaaagagcttctgcaggagatcagtcacaaa
gtcactgtctacagcacctgtctgttttaa

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