Salvelinus namaycush (lake trout): 120054169
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Entry
120054169 CDS
T07522
Name
(RefSeq) zinc finger RNA-binding protein-like isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120054169
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120054169
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
120054169
NCBI-ProteinID:
XP_038857865
UniProt:
A0A8U1ENN4
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Position
Sna1:complement(2700485..2752627)
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AA seq
1169 aa
AA seq
DB search
MCPAGLVKMPKWLLATTLDLPTVVLHSTGGVKPLVFGHIHSNHLTTSSLHATAIQPDFPY
GSNCGFCQQPAAGVAYTHPTTVASYTVHQAPMAAHSVAAAYAPTGATVAVARPAPVAVAA
AATAAAYGGYQPAHATADYGYARQPDVPPPPPPVTSQNYQVGYQDSYSYVRSTAPAVTYD
PKQYYQQPVASSAVAAAVAVQPQPTAESYYQTASLNTSWDTTWKKTLPAPKTGYSQASLT
PYTQTQQSRQVTAIKPVTPSPASSTFSIYPVSTVQPVAAVASVVPSYSQSPTYSTNAVTY
SGKHDMQAVTSMHYLPTTYSTNAVTYSQSPTYSTNPVAYSGTSYSGYEAAVYSAASTYYQ
QQQQKQAVAAVAASAGWTGSSFAKKTPFQSKQLKPKQPPKPPQIHYCDVCKISCAGPQTY
KEHLEGQKHKKKEVALKASQSSSSSSSSGGSSARGTQNQLRCELCDVSCTGADAYAAHIR
GAKHQKVVKLHTKLGKPIPSTEPSVVTQTPTSTTASSSKTPSSSTTPTGSTSNSSYLKPV
NIGSQGGAGAGLGKGLVGNNLSAANATTAVKKFNTPKINFVGGNKLQTTGKVTEETKVET
SKPPPPSLVPQPQETKNESSDSLSTLAALQNDVQPVGHDYVEEVRNDEGKVIRFHCKLCE
CSFNDPNAKEMHLKGRRHRLQYKKKVNPELQVEVKPSIRARKIQEEKMRKQMQKEEYWRR
REEEERWRMEMRYGEIGRYEEEMYWRRMEGQHHWDERRGGPRMPGDGPYLQGPPGPPGLL
GVRPGMPIPQPQGPVPPRRPDSSDDRYVMTKHATIYPSEDELQAIQKIVSITERALKLVS
DIIIDQDKTKETTAEDKDTKEVPKTPQDRALKGVMRVGVLAKGLLLCGDNNVNLVLLCSE
KPTKNLLSRIVEHLPKQLTVVTPEKYEVKGTIEDCSIILTSGADPKMTVTITLTSPSIRE
EEETPTTPPPRDGDVTWGLVRDPADVLDRQKCLAALAALRHAKWFQARANGLQSCVIVIR
ILRDLCQRVPTWSAFPSWAMELLVEKAISSASGPLSPGDALRRVFECISSGILLPGGPGL
VDPCEKNPTDTLTAMEEQHREDITSSAQFALRLLAFRQIHKVLGMDPLPQMNPRFNVRNN
RKRRRDNSDGTDGFEGEGKKDKKDFDSSY
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccagccggcttggtgaagatgccaaaatggctactggcaactactttggattta
cccacggtggtgctgcacagtacaggtggagtaaaacctttagtgtttggtcacattcat
agcaatcacttgactacatcaagcttacacgcgactgctattcaaccagattttccatat
ggatcgaactgtggcttctgtcagcagccagctgcgggggtggcctacacccaccctacc
accgtggccagctacaccgtacaccaggcaccgatggcggcccactccgtggcagcagcc
tacgctcccaccggcgccacagttgccgtagccaggcctgcccctgtcgccgtggcagca
gcagccactgccgcagcctacggagggtaccagccggcgcacgccaccgctgactacggc
tacgcacgccagccggacgtccccccgccgccccccccggtcacgtcccagaactaccag
gtaggataccaggactcctactcctacgtacggtccacggccccagcggtaacctacgac
cctaagcagtactaccagcaacccgtagctagctctgcggtagccgctgcggtagccgta
cagccccaacccactgccgagtcctactaccagaccgcctcccttaacacatcctgggac
accacgtggaagaaaactctaccagcccctaagacaggctacagccaggccagtctcacc
ccctacacccagacccaacagtctcgtcaggtgacggccatcaagcctgttactccctcc
cccgcctcctccacattctccatttaccccgtgtccaccgttcagcctgtagctgccgtc
gcctccgtcgtcccctcctactctcagagccccacgtactccaccaacgcggtcacgtac
tctggtaagcacgacatgcaagccgtaaccagtatgcactacctgccaactacctactcg
accaacgcagtcacgtactcccagagtcccacgtatagtaccaaccccgtcgcctactct
ggtacgtcgtactcgggctatgaagcagcggtgtactctgctgcctctacctactaccag
cagcagcagcagaaacaggctgtggcggcagtcgctgcgtcagcaggctggacaggaagc
tccttcgccaagaaaactcccttccagagcaagcagctgaaacccaagcagccccccaaa
ccaccacagatccactactgtgacgtctgcaagatcagctgtgcaggaccccagacctac
aaggagcacctggagggccagaagcacaagaagaaagaggtggccctgaaggcctcccag
agcagcagcagcagtagtagtagtggaggaagctcagcccgggggactcagaaccagcta
cgctgtgagctctgtgacgtctcctgcaccggggcagatgcatacgctgcacacatcaga
ggggccaagcaccagaaggtggtgaaactgcacaccaagctggggaaacccatcccttcc
acagagcccagtgtcgtgacccagacccctacgtccaccacggcttcctcctccaagacc
ccctcctcctctaccacccccacaggatccacctccaactcttcctacctgaagccggtt
aacatcgggagccagggtggtgcgggggccggactggggaagggtctagtggggaacaac
ttatcagcagccaatgccaccacagctgtcaagaagtttaacacccccaagatcaacttt
gtcgggggaaacaagctccagactaccgggaaggtgacagaggaaaccaaggtggagaca
tccaagcctcctccaccctcattggtcccccaacctcaggagacgaagaacgagtcctct
gattcgctgtctaccctggccgccttgcagaatgacgtgcagcctgttgggcacgactat
gtggaagaggtgcgtaacgacgaaggcaaggtgatccggttccactgtaagctgtgtgaa
tgtagcttcaatgatcccaacgccaaagagatgcatctgaagggcaggagacaccgcctg
cagtataagaaaaaggtgaacccggagctacaagtggaggtgaagccttctatcagagcc
aggaagatccaggaagagaagatgaggaaacagatgcagaaggaggagtactggaggagg
agagaggaggaggagagatggaggatggagatgaggtacggagagatagggcgttatgag
gaggagatgtattggcgtcgtatggaggggcagcaccactgggacgagagacgtgggggg
cccaggatgccaggggacggaccatacctccaggggccccctggtccacctggactactg
ggcgttcggcctggcatgcccatccctcagccacagggacctgtacctcctcgtcggccg
gactcgtcagacgaccgctacgtgatgacgaagcacgcgaccatctacccctctgaggat
gagctgcaggccatccagaagatcgtctccatcacagagagagccctcaaactggtctca
gacatcatcatcgaccaggacaagaccaaggagactactgcggaggacaaggatacaaag
gaggtccccaagactccccaagaccgagctctgaagggggtgatgagggtgggggtgctg
gctaaaggactgctgctctgtggagacaacaatgtcaacctggtcctgctttgctcagag
aaacccaccaagaacctgctaagccgcatagtggagcatcttcccaagcagctgacggtg
gtgaccccagagaagtacgaggtgaagggtaccatcgaggactgttccatcatcctgacg
tctggagccgaccccaaaatgacagtcaccatcaccctgacctcccccagtatccgagag
gaggaggagacccctaccacacccccgccacgggacggagatgtaacctggggcttggtg
cgagacccagcggacgtcttggacaggcaaaaatgccttgccgctctagcggctctgcgg
cacgctaagtggttccaggctagggcgaacggactccaatcctgtgtgattgttatccgt
atcctgcgtgacctctgtcagagggtccccacgtggtccgccttccccagctgggccatg
gagctgctggtagagaaggccattagcagtgcctctggccccctgagcccaggcgacgca
ctgagacgagtctttgaatgtatttcctccggaatcctgctccccggtggcccgggattg
gtcgatccgtgtgagaagaaccccactgacaccctgacagccatggaggagcagcacaga
gaggacatcacctcaagtgcccagtttgctctgcggctgctagcgttccgtcagatccac
aaggtgctgggcatggacccacttccccagatgaacccccgcttcaacgtccgcaacaac
cgtaagcgtcgccgtgacaacagcgacggaacggacggattcgagggtgaagggaagaag
gacaagaaggatttcgacagtagctactag
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integrated database retrieval system
