Salvelinus namaycush (lake trout): 120054170
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Entry
120054170 CDS
T07522
Name
(RefSeq) neuronal cell adhesion molecule-like
KO
K06756
neuronal cell adhesion molecule
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120054170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120054170
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
L1 family
120054170
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
V-set
Ig_VEGFR-1-like_5th
Ig_5
C2-set_3
V-set_CD47
SIT
Motif
Other DBs
NCBI-GeneID:
120054170
NCBI-ProteinID:
XP_038857537
UniProt:
A0A8U1BRC1
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Position
Sna9:complement(51980621..52007135)
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AA seq
1148 aa
AA seq
DB search
MRPHSGTLVVDISGEKVESYEGVYQCTARNEHGTAVSNNIVIRQSRSPLWSKERNEPIIV
QEGVSLVLQCRPPAGLPPPIIFWMDINFQRLPQSIRVSQALNGDLHFSNVLKEDSRNDYI
CYARFPHTQTIQQKQPITVTVLNLDAINETVAALYNETDFLSDGSAEERRPTFLIPSGSS
TSKMVLRGQVLELECIAEGLPTPEVSWSKVSGEFPAKRTSFLHFQKTLRIVDVSEADAGE
YRCTARNRLASVHHTIRVTVKAAPYWISTPRNLVLAPRERGNMICRASGTPKPTITWAMN
GIPIESEYSDPSRKVEGDTIIFEEVQTGSSAVYQCNASNEYGYLLSNAFVNVLSETPRVL
TPANKVYQVIRNNHALLDCSSFGSPIPKITWFKDSRSSTLDGDPYVLHENGTLEIHVAQA
VNSGKYTCVARNSLGISENHVYLEVKEPTRILKQPEYQVVQRNRNVVFECKVKHDPSLIP
TMTWVKDDGELPDDERFLVDSDSLTITDVTENDAGTYTCIMATTLDQDSASAELIVVEQP
DPPTDLELTDQKPRSVQLTWIPGDEHNSPIHVFVIQYTDSLHHHGHWHNLTLVPGSKTTA
HLKLSPYVHYAFRVLALNEVGFSNPSLPSRMYKTNPSAPDENPSGVDGFGTEHDNLVISW
KPMSGHQANGPGLQYKVMWRQKDVDKEWTSVTVANVSKFMVSGTPTFTPYEVQVQAINDY
GIGPEPAVVTGHSGEDLPMQAPDNVQVLVLNSSLAEVHWEPVPPKTVRGRLKGYKVYYWR
ERSLHKHNPHHVEQQVLTFSGNKSHGMLPGLQPYSLYLFNVRVFNGKGEGPASSNQQFET
PEGVPGRPSFLKITKPSLDSLTLEWGPPYDRNGLLTGYTLKYQTVNISNVLGPVEELALP
ANETTVTLINLKYSTRYKFYFNAKTGQGAGPVVTEEAATIMDEGEEEWQKEYVNGSRAYV
LKGLKEGLSYRVRVVAKGHNGQAVLHQSEELLVMIPAMAARQVDIATQGWFIGLMCAIAL
LILVLLIICFIQRNKGGKYPVKEKEDAHTDPEFQPMKEDDCTFGEYSDTEDHKPLKGSRT
PSNGTVHRDNSDDSLVDYGGDGGDGQFNEDGSFIGQYSGKSSARDTAGGHESSEAPSPVN
TSAMNSFV
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccccactctggcaccctggtggtggacatcagtggagagaaggttgagtcatat
gagggggtgtaccagtgtacggccaggaacgaacatgggactgcagtatcaaacaatatc
gtcatcagacagtccaggtcccccttgtggtcgaaggaaagaaacgagccgatcatcgtt
caggagggcgtgtctctggtgctacagtgccggccccctgccggcctgccccctcccatc
atcttctggatggacatcaacttccagaggctgcctcagagcatccgtgtgtcccaggcg
ttgaacggagacctgcacttctccaacgtcctgaaggaggactcgaggaacgactacatc
tgttacgcccgctttcctcacacacagaccatccagcagaaacaacccatcaccgtcaca
gtgctcaacctggatgcaatcaatgagactgttgctgctttatacaatgaaactgatttt
cttagtgatggctcggcggaggagaggagacccaccttcctgattccgtctggctccagc
acctccaagatggtgctgagaggacaggtcctggagctggagtgtatcgctgagggacta
cccactccagaggtgtcatggagtaaggtgagcggggagttccctgccaagcggacttcc
ttcctgcacttccagaagacactgcgtatcgttgacgtgtctgaggcggacgccggagag
taccgctgcaccgcccgcaaccgcctggcctccgtacaccacaccatccgcgtcaccgtc
aaagcggccccgtactggatcagtacccccagaaacctggtgctggctcccagggagagg
ggtaatatgatctgcagggccagtggtacccccaaacccaccatcacctgggccatgaac
ggaatccccatagaaagtgagtactcagaccctagtaggaaggtggagggtgacaccatc
atctttgaggaagtccagactggatccagtgcagtctatcagtgtaacgcatccaatgaa
tatggatatctgctgtccaatgccttcgtcaacgttctctctgaaacacccagagtcctg
actccagctaacaaggtctaccaggtgatcaggaacaaccacgccttactggactgttcc
tccttcggctcgcccatccccaaaataacatggtttaaggacagcaggtccagcaccctg
gacggggacccctacgtgctgcatgagaacgggactctggagatacatgtggcccaggcc
gtcaacagtgggaagtacacttgtgtggccaggaactctctgggcatctctgagaaccac
gtctatcttgaggtcaaagagcccacgcgtatcctgaagcagccggagtaccaggtggtg
cagaggaacaggaacgtggtgtttgagtgtaaagtaaaacacgacccctccctcatccct
accatgacctgggtcaaagacgacggagaactacccgacgacgagaggtttctggtggac
tctgacagcctgaccataaccgacgtgacagagaatgatgcaggaacttacacctgcatc
atggccaccactctggaccaggactctgctagcgctgagctcatcgttgtcgaacaacca
gaccctcctactgacctggagctgacagaccagaagcccaggagtgtccagctgacctgg
atacccggagacgaacacaacagccctattcacgtgtttgtgatccaatacacagactct
ctccaccaccatggccactggcacaacctgaccctggttccgggctctaagaccacggcc
caccttaagctgtctccttatgtccactacgccttccgagtcctggccctcaatgaagtg
ggcttctccaacccctcattgccctcccgcatgtacaagaccaacccttcagctcctgat
gagaaccccagtggagttgatggctttggaacggaacacgacaaccttgtgatctcatgg
aagccaatgtcaggtcaccaggccaacggaccaggcctgcagtacaaggtgatgtggaga
cagaaggacgtggacaaggagtggacgtcagtgaccgtggctaacgtctccaagttcatg
gtctctggcacgcccaccttcacaccctacgaggtccaggttcaagccatcaacgactac
gggattggacctgagccagctgtggtcaccggacactccggggaggacttgccgatgcag
gcaccagacaatgtccaggttctagtgttgaacagcagtctggctgaggtgcactgggag
cctgtcccacctaagacagtacggggacgtcttaagggatacaaggtgtactactggcgt
gagcggagcctccacaaacacaacccacaccatgtggagcagcaggtcctgaccttcagt
gggaacaagagtcatggcatgctcccaggcctgcagccctacagcctctacctgttcaac
gtcagggtcttcaacggcaagggggagggccccgccagctccaaccagcagttcgagacc
cctgagggagtccctgggcggccatctttcctgaagatcaccaagcctagcctggactct
ctcactctggagtggggccctccctacgaccgaaacggactcctcaccggctacaccctg
aaatatcagacagtcaatatctccaacgtgctgggtccggtggaggagctggccctgcca
gccaacgagaccaccgtcactctcattaacctcaagtacagcacgcgttacaagttttat
ttcaatgccaaaacaggccagggagcagggcctgtcgttacagaggaagccgccactatc
atggatgaaggtgaagaggagtggcagaaagagtatgtaaatggctctcgggcctatgtg
ctgaagggcttaaaggagggcctgtcctatagggtgcgcgtggtcgccaagggtcacaac
ggccaagcggtgctccaccaatcagaagagcttttggtgatgattccagctatggcagcc
cgacaggtggacattgctactcagggctggttcatcggcctgatgtgtgccatcgctctc
ctcatcctcgttctcctcatcatctgcttcatacagagaaacaagggaggaaaataccca
gtgaaagaaaaggaggacgcgcacacagacccagagttccagcccatgaaagaggatgac
tgtactttcggggaatacagtgacactgaggaccataagccgttaaaagggagccgcacg
ccgtctaacgggacggtgcacagggacaacagtgacgacagtttagtagactacggcggc
gatgggggtgacggccagttcaacgaggatgggtcttttatcggacagtatagcggaaag
agctccgccagggacactgctgggggtcacgaaagctctgaggccccgtcccctgttaat
acctccgctatgaactcctttgtgtag
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