Salvelinus namaycush (lake trout): 120054237
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Entry
120054237 CDS
T07522
Name
(RefSeq) nuclear receptor subfamily 5 group A member 2-like
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120054237
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120054237
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
120054237
Nuclear receptors [BR:
snh03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
120054237
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120054237
NCBI-ProteinID:
XP_038857604
UniProt:
A0A8U1EGU5
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Position
Sna1:complement(19647201..19664916)
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AA seq
489 aa
AA seq
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MLGEKAQGVPLMVGVMDYTYDEDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKK
RYTCAENQECKIDKTQRKRCPCCRFQKCLDVGMRLEAVRADRMRGGRNKFGPMYKRDRAM
KQQKKALIRSTGFKLESAPPQLSPVQTNYGFTGTLHSLPSLPKGLMPSIPASITPTDYES
SLYGPSSLGVAMQPHGPLPTQYQCTAFPSRAIKSEYSDHHTSSPESLVGYPFPDVYPSGG
SPQPPTLSPLVLELLRCDPDEMQVQGKIMTFLQQEQSGRGRQDRLSTFSLMCRMADQTLF
SIVEWARSCIFFKELKVGDQMKLLHNCWSELLVLDHVFRQVQHGKESSLLLVTGQEMDLS
SMGSQAGLSLSGLVQRGQELAGRLLALQVDRREVACLKFLLLFNPNVKLLENQVFVESVQ
EQVNGALLEYTVCTYPLYLDKFSQLVLRLPELRALSTQAEDYLCYKHLSGEVPCNNLLIE
MLHAKKACI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttgggagaaaaggcacaaggcgttccattgatggtaggcgtaatggactacacctat
gatgaagatttggaagaattgtgtcctgtttgtggagataaggtctcaggataccactat
ggactccttacttgtgaaagttgtaagggcttcttcaagaggacagtccaaaacaagaag
aggtatacttgtgcagaaaaccaggagtgtaaaatagacaaaacacagcggaagagatgt
ccctgctgccgattccagaaatgcctcgatgttggcatgagattagaagctgtgcgtgca
gaccgcatgcgtgggggcaggaataagtttgggcccatgtacaagcgggacagagccatg
aagcagcagaagaaggctttgatacgttccacgggcttcaagctggagtctgctcctcca
cagctctcccctgtacagactaactatggcttcactggcaccctgcacagcctcccatcc
ctccccaaaggactcatgccctccatcccagcctccatcacccccacagactatgagtcc
agcctctacggaccctcctccctgggggtggccatgcagccccatggacccctgcctacc
cagtaccagtgcacagcattccccagcagggccatcaagtctgagtactctgaccaccac
acaagctccccagagtctctggtggggtacccctttccggatgtgtacccctccggaggc
tccccacagcctcccaccctctccccactggtgctagagctgctgcgctgcgacccagac
gagatgcaggtgcagggtaagatcatgaccttcctgcagcaggagcagagtggccggggc
cggcaggacaggctcagtaccttcagcctaatgtgtcgcatggctgaccagactctgttc
tccatagtggagtgggccaggagctgcatcttcttcaaggagctcaaggtaggggaccag
atgaagcttcttcacaactgctggtctgagctgctggtcctggaccatgtcttcagacaa
gtgcaacatgggaaggagagcagcctgctgctggttactggccaggagatggatctgtca
tccatggggtcacaggcggggttgagtctgtcaggcctggtccagagaggacaggagcta
gctgggaggctactagccctgcaggtggacaggagagaggttgcctgcctcaagttcctc
ctcctcttcaatcccaatgtgaagctgttggagaaccaggtgtttgtggagagtgttcag
gagcaggtgaatggggctctgctggagtacactgtgtgcacctaccccctgtacctggac
aagttcagccagctggtgctgcgtctgccagagctgcgagccctcagcacccaggcagag
gactacctgtgctacaaacacctgagtggggaggtgccctgcaacaacctgctcattgag
atgctgcatgccaagaaggcctgtatatga
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