Salvelinus namaycush (lake trout): 120054326
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Entry
120054326 CDS
T07522
Name
(RefSeq) calcium-activated chloride channel regulator 1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120054326
Ion channels [BR:
snh04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
120054326
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GFIT
Motif
Pfam:
CLCA
VWA_2
VWA
DUF2201
VWA_CoxE
fn3
PTCRA
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
120054326
NCBI-ProteinID:
XP_038857666
UniProt:
A0A8U1BNS5
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Position
Sna10:36663215..36674127
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AA seq
910 aa
AA seq
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MASKVAVVLLLIYLSGSTFGIKLTGNGYTDILIAINPKVPEDPVLITQIQEMIKEASRNL
LDATKKHLYFKEVAILVPPNWNKGNYSRAKTEVYDKANIIIDEPNKLHGDQPYTLQYGEC
GSEGRYIHLTPDFMLKDDVSKYYGPRGKVFVHEWAHLRWGVFDEYNEEKPFYLSGSIIEA
TRCTINITGKYIHKRDQKDCTTDPVTGLYTEDCVFYPDTQQTTSASIMYNQGLSAVKEFC
TKETHNTEAPNIQNRLCGNRGVEEVITSLSVDAGVAVVPTPPSILPTFTVGQRRQRVVCL
VLDVSGSMSAGSRMLNLRQAATLFIQKIVEDQAYVGIVQFTATATIREPLTLIDGKASRD
KLVRSLPLSAGGGTDICAGVEKGLEVLGGDGDGARGDEIILLTDGESSINCQKRVKESGA
TVHTITLGPNANIGVKELSDISGGKYHNAADGVDSNDLVDIFASHTTSDGNLTKQTIQLE
STGLNMIGWFNGSVSIDRTIGNKTSFLVIYERSSPDILVLSPFTRTYDTSHFQHDAPAKT
LTLDIEGTAETGKWKYSLLNKQSTAQSMSMTVTSHAVSEAISPVMVKTHMSQLSSNGSKP
MLVYAEVNQKGVPVILADVMATLTSDKGVKHELKLQDNGAGADAFRNDGIYSSYFTKLTT
GKYSLKVKVHNNDGMARFSLRRHSGALYIPGYVVNGQVVMNPPKPPVSEDDLQADVGSFS
RTAIGESFSVSLPPGVPPPNFPPNKITDLNAEIEADKVLLTWTAPGEDMDQGTATAYEIR
FSEDSDLLRSNFSTAHLVTYNLSPKKAGSPEKVSFTLFSVIKNGTTLFFAAKAEDKSFLK
SETSNIIQVTKIVPKAPVPSPTDAPGGPDTSGSGVNITAIVISVTTVTMVACLIASVTMC
SIKSRRVNHA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagtagctgttgtgttgctgctgatttacctgtcaggatctacatttggg
atcaagctgactggaaatggatacactgacattctgattgctattaaccctaaggtgcct
gaggacccagtgctcatcacacaaatccaggaaatgattaaagaagcctccagaaatcta
ctcgatgcaacaaagaaacatttatatttcaaggaagtcgcaatattagtgccacctaat
tggaataaaggaaattactccagagcaaagacggaggtctacgataaggccaatataata
attgatgagccaaataaattacatggagatcagccttacactctgcagtatggtgaatgt
ggatctgagggccggtacattcatttgactcctgacttcatgctgaaggatgatgtctct
aaatactatggacccagaggtaaggtttttgtccatgaatgggcacatctaagatgggga
gtttttgatgaatataatgaagaaaaaccattctacctgtcaggttccataatcgaggca
acaagatgtaccataaacattacaggaaagtacatccacaaacgtgaccaaaaggactgc
accactgaccctgttactgggttatacaccgaagactgtgtattctatcctgacacgcaa
cagacaacctctgcatcaatcatgtacaatcaaggccttagtgctgtaaaagagttctgt
acaaaagaaactcacaacactgaggctccaaacatccagaacagactgtgtggtaacaga
ggtgtagaggaagttatcacctcactttctgtagatgccggtgtggcagttgtgccaaca
ccaccaagtatactacccacattcactgtggggcagcgacggcaaagggttgtctgtctt
gtccttgatgtttcaggaagcatgtctgcaggttctagaatgttgaacctgagacaagcg
gcaacactcttcatacagaagattgttgaagaccaagcttatgttggcattgtacaattt
acagctacggctacaattcgtgaaccattgactttgattgatggtaaagcatcgagagat
aagcttgtacgcagtctgccactatcagctggtggaggcacagacatttgtgcaggtgtt
gagaaaggtctggaggtacttggaggagatggagatggtgcaagaggagatgaaatcata
ttattaactgatggggaatcaagtatcaactgtcaaaaacgtgttaaagaaagtggtgca
actgtgcacacaataactcttgggccaaatgcaaacataggagtaaaagaattgtcagac
atatcaggtggtaaatatcacaatgctgctgatggtgtggattccaatgatcttgtggat
atttttgcttcacacacaacatctgatggaaatctgaccaagcagacaatccagcttgag
agcactggattgaatatgattggttggtttaatggatctgtatccattgacaggacaatt
ggaaacaagacaagctttttagttatctatgaaagaagttcacctgacatccttgtttta
agcccctttacacggacctatgacacatcacatttccaacatgatgctcctgctaagact
ttaacgctcgatattgaaggaactgctgagactggaaagtggaaatacagtctactaaat
aaacagtcaaccgcccaatctatgtcaatgactgtgacaagtcatgctgtcagcgaagct
atatcaccagtcatggtcaaaacccacatgagccaactgtccagcaacggcagcaaaccc
atgttggtgtatgcagaggtcaaccagaaaggtgttccagtgattctggcagatgtgatg
gccacactaacgtctgataagggagtcaagcatgagctgaaactgcaagataatggagca
ggtgctgatgctttcagaaatgatggcatctattccagttacttcactaaactaacaaca
ggaaaatacagcttgaaagtgaaagtacataacaatgatggcatggccagattctccctc
aggagacacagtggagcactttacatacctggatatgtggttaatgggcaagtagtgatg
aatcccccaaagcccccagtcagtgaggatgacctgcaggctgatgtgggcagcttcagc
aggacagccataggagagagcttctcagtcagtctcccacctggtgtcccccctccaaat
ttcccccctaacaaaatcacagacctgaatgcagagatagaggcagacaaagtgctgctc
acctggactgcacctggggaagacatggaccaaggcacagcaacggcctatgagatccgt
tttagtgaagattcggacctactcagatcgaacttcagtaccgctcatcttgtcacatac
aacctctcaccaaagaaggcaggctccccagagaaggtctctttcactctcttctcagtc
atcaaaaatggcaccactctgttctttgcagcaaaagcagaagacaaatctttcctgaaa
tctgaaacatccaacattattcaagtgaccaagattgttcccaaagctcctgttccttct
ccaactgatgctcctggggggcctgatacatcaggcagtggagtgaacattactgctata
gtcatatcagtcaccacagtaaccatggtggcttgtctgattgctagtgtgacaatgtgt
tcaattaaatcaaggagagttaatcatgcttaa
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