Salvelinus namaycush (lake trout): 120054337
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Entry
120054337 CDS
T07522
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04382
Cornified envelope formation
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120054337
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120054337
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120054337
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Major cadherins
120054337
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
120054337
NCBI-ProteinID:
XP_038857676
UniProt:
A0A8U1BIC4
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Position
Sna10:complement(38297575..38321013)
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AA seq
1204 aa
AA seq
DB search
MNRVSLPAAALLLFTFTVLVSVTVVETRHSTGLRRHRREWIIPPQKLDENVDYTKKEFIA
KIRSDSDDGTGNVQYSLTGVGATNYPFNLFIVNPDTGFVRITGILDRETIAMYNLSGTAR
FTDGSQAEKNIDLRIQVVDQNDNPPIFGDINPGEVYELSSKGKYTSIMKLVATDADEPGN
ENSRIAYTIIKQEPPGESMFYITNEGELRVKQPTLNREVQDWYMLTVKATDLNGRPEGNT
GTGTFRVNIKDVNDNPPTLEKDEYEGSIEENTENVEVMRFKVEDMDMENTPNWVSQFEIV
KGNEAGYFSIETDPKTNEGVLMLKKSVDYEDVKHLELGIAVANQAPPYNGEGGGGGGGGG
GGGSGAGSGAGSGAGGGGSGGGGGGGSWFGGGGSTGKPMKTYPVKIAVKNQPEGPRFDPK
VKAIPISEGGDFKINKVIGSYHAIDGDTLMPAQNVRYAKGSDPDNWLTVDELTGDIKLNK
MPDRESKFLVNGTYYAKVLCMTQDMPSKTATGMVAIQVEDLNDHCPTLTSNVQTMCMTAD
AITVTAVDKDAFPNGAPFTFTIIPEGTEGVWVVEHLNDTSTILRSQKDLWPGSYAVAMEI
RDQQGHACPDLQKLKVDVCTCADKGKACATRGAKGSTGAVLGPAAIGLLFLGLLTLLLIP
LLLLFCTCGGAGGLPGGFTEMPFDAKAQLISYHTEGQGENTEVPLLNAPVQVDTGRVKMI
NAGTIAATTGGAGLMIGGDQFQNSSSTMGGGFYQSDGLMDIGYKNGGEIIGHGNGGGFYS
EYESREGGGAYEGIALPDHYLEEYYSQKAHCAAENHIQKDSQLVYDYEGQGSSVGSVGCC
SLLESDNDLQFLNDLGPKFKTLAEVCRGERIQTEVSAPLPPRPIISMPTAASSVTTNVAS
RVVSAAPVPAPAPPPAPAQVTHVERAVVRESDRSDRLSTLRQDMVGGSQGQTFLLQQQPM
YYTTMQPMMQPVVQQMHYVVEQQVPNTQGMIMVNGPPSGSAQGLVLQGQRVVTGTQAQGT
LGRGEGGLIHMGNMSGSQGMMVVDGPVMQGGQMLQGGQMLQGGQVFQGGQVLQGGQLVQG
GQVLQGGQAWLQQCSSLQRGGLSGSQSMLVMEGQGGSSGGSGVQKGQGGVLGFSQGSMQR
NGLSGSHRVIYTTEQSSAAESSAGSQSGIVGLNESSSKVSIGPASTSRKAVIEKRVVTNQ
STSK
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgggtttctttgcccgccgctgctcttttgctatttacattcacggttttagtg
tctgtgactgtggtggagacacgtcattccactgggctaaggagacacaggagggaatgg
atcatccctccccagaaactagatgaaaatgtagactacaccaagaaagagtttatcgcc
aagatccggtcagattcagacgatgggactggtaatgtgcagtactctctaactggggtg
ggagctactaactaccccttcaacctgttcatagtgaaccctgacaccggctttgtacgc
atcactggtatcctggaccgggagactatcgccatgtacaatttgtcaggtaccgctagg
ttcactgatggcagtcaagcagaaaagaacattgatttgaggatccaagttgtggatcaa
aatgataaccctcctattttcggtgacattaacccaggagaggtgtacgagctcagctca
aaaggcaagtacacgtccatcatgaagttggttgcgacagacgctgacgaaccagggaat
gagaactctcggattgcctacaccataattaaacaggagcctccaggagagagcatgttc
tacatcaccaatgaaggagaactgagagtaaaacagcccacactgaacagagaggtgcag
gactggtacatgctgacagtgaaagctacagatctgaacggtagaccagagggcaacacc
ggcaccggaacctttagagtcaacatcaaggatgtgaacgacaaccctcccactttggag
aaagatgagtatgagggcagtattgaggagaacacagagaacgtggaggtgatgaggttc
aaagtggaggacatggacatggagaacactcctaactgggtgtctcagtttgaaatcgtc
aagggcaacgaggctggctacttcagtattgagacagaccccaagaccaacgagggagtt
ctgatgctcaagaagtctgtagactatgaagacgtcaaacaccttgagctgggaatagcc
gtagctaaccaggctccaccctataatggtgaaggaggaggaggaggaggaggaggagga
ggaggaggaagtggggcaggaagtggggcaggaagtggggcaggaggaggaggtagtgga
ggaggaggaggtggaggatcgtggtttggtggtggaggttctacagggaaacctatgaag
acctacccagtaaagatcgccgtgaagaaccagccagaggggccacggtttgaccccaag
gtcaaggctatccccatctcagagggaggagacttcaagatcaacaaggtgatcggctcc
taccatgccatcgacggagacacactaatgcctgcacagaacgtcaggtatgctaagggc
tctgacccagacaactggctgaccgttgatgagttgactggggatattaaactcaataag
atgcctgacagagagtccaagttcctggtcaacgggacatactacgccaaagttctctgc
atgacccaagacatgccctctaagacagccacgggtatggtagccatccaggtggaggac
ttgaacgaccactgccccacgcttactagtaacgttcagaccatgtgtatgacagccgat
gctattaccgtgactgcagtggacaaggatgcgttccccaacggagcccccttcaccttc
accatcatcccagagggaacagagggagtgtgggtggtcgagcacctaaacgacacctca
accatcctgaggtcccaaaaggatttgtggccgggctcctacgcagttgccatggagatc
cgcgaccagcaggggcacgcgtgtcctgacctgcagaagctaaaggtagatgtctgcacg
tgtgcggacaaagggaaggcgtgcgcgacgcgaggagctaagggctcaaccggggcagtg
ctagggcctgcagcaattggactgctcttcctgggtctgctgacgctactgctaatccct
ctcctgctgttgttctgtacgtgtgggggtgccggaggtcttcctgggggcttcactgag
atgccctttgacgccaaggcacaactcatttcctaccacactgagggacagggggagaac
acggaagtacctctgctgaatgcaccagttcaggtcgacacaggaagggtcaaaatgatc
aacgcgggaaccattgcagcaacgaccggaggggcggggctaatgataggtggtgatcag
ttccagaactcctcctccacgatgggcggtggattctaccaatcagacggccttatggat
attggatataagaatggaggagagataatcggccatgggaatggaggaggcttttattct
gagtatgagagcagagagggaggaggagcctatgaaggcatcgccctgcctgatcactac
ctggaggagtactactctcagaaagctcattgtgcagctgaaaaccacatccagaaggac
agtcagttggtgtatgactacgagggccagggctcttctgtgggctcggtgggatgctgc
agcctcctggaatctgacaacgacctccagttcctcaatgacctggggccaaagttcaag
accctggccgaggtgtgccgcggagagaggatccaaactgaagtctctgcccctctgcca
cccagacccatcatctccatgccaacagcagccagcagtgtgacgaccaatgtggcgtcc
agagtggtttccgccgccccggtcccagccccagcaccgccccctgccccggcccaggtg
acacacgtcgagagggctgtggtgagggagtcagatcgttcagatcgtttgtctactctg
aggcaggacatggtgggaggaagccagggccagaccttcctactgcagcaacagcctatg
tactacaccaccatgcagcctatgatgcagcccgtggtgcagcagatgcactatgtagtg
gagcaacaggtccccaacacacagggcatgataatggtcaacgggcctccgtcaggctcg
gcccagggcctggtgctgcaggggcaacgggtggtgaccggtacccaggctcagggcacc
cttggcaggggagagggaggcctgatccatatggggaacatgtctggttctcagggtatg
atggttgtggatgggccggtgatgcagggggggcagatgctccaaggggggcaaatgctg
cagggggggcaagtttttcagggggggcaagttcttcagggggggcagttggtacaaggg
ggtcaggtccttcaggggggtcaggcctggctgcagcagtgtagctccctgcagcgaggg
ggcttatcagggtcacagagcatgctggtgatggagggacaggggggtagcagcggaggt
agtggggtgcagaaaggccagggaggggtgttagggttctcccaggggtccatgcagagg
aacggcctctctggctcacacagagtcatctacaccacagagcagagctcagccgcagag
tccagcgcaggctcacagagcggcattgtaggattgaacgagtcctccagcaaggtcagc
ataggccccgcctccacctcccgcaaggcggtgatagagaagagagttgtgaccaaccag
agcaccagtaaataa
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