Salvelinus namaycush (lake trout): 120054341
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Entry
120054341 CDS
T07522
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120054341 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120054341 (taf4b)
03036 Chromosome and associated proteins [BR:
snh03036
]
120054341 (taf4b)
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120054341 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
120054341 (taf4b)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120054341 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
120054341
NCBI-ProteinID:
XP_038857678
UniProt:
A0A8U1BXB3
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All DBs
Position
10:complement(39082189..39097798)
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AA seq
645 aa
AA seq
DB search
MPAFISKGKRSTCYVIHNHKVSREQPASNGVHDNHGTETHFSGGCGTESELSNGDHERTA
TGAHELSFGTSGDSSCHRDPGTGEGCSMVLIRSDSGQLMLVSQQALAAAQGLAARTPGTG
TSPSPRPPTTQVVGAAPTPPAGQIPRPLIRPVAPVTVTRSPGPGPLIIPTKPTNTPRATP
PTITPEVLENVKKCKNFLVTLIKLASSGTHSADMAKNVRELVKSLLDGRLEPEEFTDQLY
RELKSSPQPYLKSLPAVRQLTPNPQLFIQEVDQPKPQAPAASKAPASKAPAPTAGRTPTL
LSTNSRPAHLSTASGQSIKSTQLVIQQPRGVVYKPAVTNPAPARTYLSVQNRSLAKPMVI
QSGQHYNTGAVVRRTPFLVPPPPAQRHPFKDSVGSFREEDDINDVASMAGVNVSEENARI
LASNSGLMGSVERSCQDKPFLSPAPLLTHILHTALTGEKFGLSEVGSDVVSLVSHATQER
LRDLLEKVTVVAQHRKMVLKEDYSHVQTSDVRSQLHFLEELERLEKQRRDDEERETLLRV
ARSRCNTDDPDQQLLKQRAKELQQLEQAQLQHREANLTALAAIGPRRKRPLDSNGNQVGP
GGIMSVLQRAGVQRVTGVSLRDLLFCLEQDPPLRHSLTLYKGLLR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccttcatttcgaaaggcaagcgctcaacctgttacgtcatccacaaccataaa
gtcagtcgtgagcaacctgcctccaacggtgttcatgataaccacgggaccgagacccat
ttctccggtggttgcgggaccgagagtgagctctccaacggtgaccatgagcgcacagcc
accggcgcgcatgagctctcctttgggaccagcggtgactcgagttgccaccgcgaccca
ggcaccggggaaggctgcagcatggtgctcatccgtagtgacagtggccaactgatgctg
gtgtcccaacaagctttggctgcagcccagggcctcgcagccagaactcctggaactggg
acctcccctagccctaggccaccgaccacacaggtggtaggggctgctccgacccctcct
gcaggccagatccccaggcctttgatccgcccagtggcccctgtcacagtcacccgttct
cctggccctggtcctctcatcatcccaaccaaacccaccaacacccccagggccacaccc
cccaccatcacacctgaggtcctggagaatgtgaagaagtgtaagaacttcctggtgacg
ctgatcaagctggcctctagtggaacgcactctgctgacatggccaagaacgtccgagaa
cttgtcaagagcctgctggatgggagacttgaacctgaggagttcactgaccaactctac
cgtgagctcaagtcttctccccagccctacctgaaaagtctcccagctgtgcggcagctc
acccccaacccacagctcttcatccaggaggttgaccaaccgaagccacaggctccagcc
gcctccaaggccccggcatccaaagccccggcccccactgcaggccgcacccctaccctc
ctctccaccaactctaggcctgcccacctcagcactgctagtggccagtcaatcaaatcc
acccagctagtgatccagcagcctagaggtgtggtgtataagcctgctgtgacaaacccc
gccccggcccgtacatacctgtctgttcagaacaggagcctggccaaacctatggtcata
cagtcaggacagcactacaacacaggtgctgttgtcaggcggactcctttcttggtcccg
ccgcctccagcccagagacaccccttcaaggacagtgttggttctttcagggaggaggat
gacatcaacgatgtggcctccatggctggggtcaacgtgagcgaggagaatgcgcgtatc
ctagcatccaactcagggctcatgggctctgtggaacgatcctgtcaggacaaacccttc
ctgtccccagccccgctgctcacacacatcctccacactgctctcacaggtgagaagttt
ggattgtccgaggtggggtcagatgtggtcagtctggtgtctcacgccacacaggagcgt
ctcagagacctgttggagaaagtcacagtggtggcacagcatcgcaagatggtcctcaag
gaggactacagtcacgttcagaccagtgacgtgcgttcccagctccacttcctggaagag
ctggaacgtctggagaagcagaggagagacgacgaggagagggagacactgctccgcgtc
gccaggagtcgctgtaacactgatgatccagaccagcaactactgaaacaacgggccaaa
gagctccagcagttggagcaggctcagctgcagcacagagaagccaacctcactgccctg
gctgccatcggacctcgcaggaagagaccactggactccaatggaaaccaggtggggcca
ggtggcattatgtcagtactacagagggctggggttcagagagtgactggggtctctctg
agggacctactcttctgtctggaacaggaccctcctctacgacactctctcactctctac
aagggcctgctcagatag
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