Salvelinus namaycush (lake trout): 120054488
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Entry
120054488 CDS
T07522
Symbol
elavl4
Name
(RefSeq) ELAV-like protein 4 isoform X1
KO
K13208
ELAV like protein 2/3/4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120054488 (elavl4)
03041 Spliceosome [BR:
snh03041
]
120054488 (elavl4)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120054488 (elavl4)
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120054488 (elavl4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
BRAP2
RNA_bind
Motif
Other DBs
NCBI-GeneID:
120054488
NCBI-ProteinID:
XP_038857839
UniProt:
A0A8U1BYX4
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Position
Sna10:22439276..22478852
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AA seq
398 aa
AA seq
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MVLGSTETQWRQAELPQLQGWAEKGLLTQPKMIISNMEPQVTNGPNGTTANGPSSNSRSC
PSPMQTGGPTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF
VNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKDLEQL
FSQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVK
FANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDSMT
SLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGF
VTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggtactgggatcgacagagacacagtggcgtcaggcagaactcccgcagctacagggc
tgggcagagaagggattgctgacacagccaaagatgataatcagcaacatggagcctcag
gtgacgaacggccccaacggcaccacggctaacgggccgtccagcaacagccgcagctgc
ccttcacccatgcaaactggaggccccaccgacgacagcaagaccaacctcattgtcaac
tacctgccccagaacatgacccaggaggagttccgcagcctgttcggcagcatcggagag
attgagtcctgcaaactggtccgcgacaagatcacagggcagagtctgggctatgggttc
gtcaactacatagacccaaaggatgcagagaaagccattaacacattaaacggactcaga
cttcaaaccaaaactatcaaggtgtcatatgcacgtcccagctcagcctccatccgagac
gctaacctgtatgtgagtggtctgccaaagaccatgacccagaaggacctggagcagctc
ttctcccagtacgggcgcatcatcacctcccgcatcctggtggaccaggtcactggcccc
acaggtggttcgcggggtgtggggttcattcgctttgataagaggatagaggctgaggag
gccattaaggggctgaatggacagaagccctctggagctgctgagcccatcaccgtcaag
ttcgccaacaaccccagccagaagaccagccaagccctactgtcccagctgtaccagtcc
cccaaccgccggtacccaggccccctgcaccaccaggcccagaggttcaggctggacaat
ttgcttaatatggcctatggcgtaaagaggttttctcccatcaccattgacagcatgact
agcctggtgggcatgaacatccctggccacacaggcactggctggtgcatctttgtctac
aacctgtctccagactctgatgagagcgtcctgtggcagctgttcgggcccttcggagcg
gtcaacaatgtcaaggtcatccgcgacttcaacaccaacaagtgcaagggcttcggcttc
gtcaccatgacgaactacgatgaggcagccatggccatcgccagtctcaacgggtaccgg
ttgggtgaccgcgtcttgcaagtctcgttcaagaccaacaagacccacaagtcctga
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