Salvelinus namaycush (lake trout): 120054568
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Entry
120054568 CDS
T07522
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120054568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120054568
Spliceosome [BR:
snh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120054568
Complex C
U4/U6.U5 tri-SnRNP related factors
120054568
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Wap1
Motif
Other DBs
NCBI-GeneID:
120054568
NCBI-ProteinID:
XP_038857946
UniProt:
A0A8U1BIU1
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Position
Sna10:41883722..41887505
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AA seq
309 aa
AA seq
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MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMALKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELQHVDEFIDELLHSERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSDEEDEEEEKPERVQTPEPHRRSYRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSKSPGHHRSHRHRSHSKSPERSSKKS
HKKSRRGNE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataggactgttaaagatgcaaacagtatacatggaacaaatccacaatacttg
gtagagaaaattattcgtactcgaatttatgaatcaaaatattggaaagaagaatgcttt
ggactgactgccgaacttgtcgttgacaaagccatggcgttgaagtttgttggaggagtc
tatggaggaaatatcaaacctacaccgtttctgtgtctcactctgaagatgctacagatt
cagccagaaaaagacatcattgtagaattcatcaagaacgaggatttcaagtatgtccgc
ttgctaggagcaatgtacatgaggttgactgggacatcagtggattgctacaaatacctg
gaaccactgtacaatgactaccgaaaaatcaagagccagaacagaaatggagagtttgag
ctgcaacatgtagatgagttcattgatgaactgctacactctgagagaatgtgtgacatc
atccttcccaggcttcagaaaaggcaggtccttgaggaggcggagttgttagacacacgc
atcagcgccctagaagaggacctggatgaagtggagaccagtgacgaggaagacgaggaa
gaggagaagccagagagagttcagaccccggagccccacagacggagttaccgggacaac
gaccgccctcgccgttcgccctctccacgctacagacgcagccgttcacccagacggagg
agcagatcacccaagagacgaagcccatcccccagacgagagcgccaccgcagcaaaagt
ccccgtcgccaccgcagccgctcccgagagagacgtcaccgctcaaagtccccaggccat
cacagaagccacaggcatcgcagtcactccaaatccccagagaggagttcaaaaaagagc
cacaagaagagtcgaagagggaacgagtga
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