KEGG   Salvelinus namaycush (lake trout): 120054568
Entry
120054568         CDS       T07522                                 
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120054568
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:snh03041]
    120054568
Spliceosome [BR:snh03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    120054568
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    120054568
SSDB
Motif
Pfam: PRP38 PRP38_assoc Wap1
Other DBs
NCBI-GeneID: 120054568
NCBI-ProteinID: XP_038857946
UniProt: A0A8U1BIU1
LinkDB
Position
Sna10:41883722..41887505
AA seq 309 aa
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMALKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELQHVDEFIDELLHSERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSDEEDEEEEKPERVQTPEPHRRSYRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSKSPGHHRSHRHRSHSKSPERSSKKS
HKKSRRGNE
NT seq 930 nt   +upstreamnt  +downstreamnt
atggcaaataggactgttaaagatgcaaacagtatacatggaacaaatccacaatacttg
gtagagaaaattattcgtactcgaatttatgaatcaaaatattggaaagaagaatgcttt
ggactgactgccgaacttgtcgttgacaaagccatggcgttgaagtttgttggaggagtc
tatggaggaaatatcaaacctacaccgtttctgtgtctcactctgaagatgctacagatt
cagccagaaaaagacatcattgtagaattcatcaagaacgaggatttcaagtatgtccgc
ttgctaggagcaatgtacatgaggttgactgggacatcagtggattgctacaaatacctg
gaaccactgtacaatgactaccgaaaaatcaagagccagaacagaaatggagagtttgag
ctgcaacatgtagatgagttcattgatgaactgctacactctgagagaatgtgtgacatc
atccttcccaggcttcagaaaaggcaggtccttgaggaggcggagttgttagacacacgc
atcagcgccctagaagaggacctggatgaagtggagaccagtgacgaggaagacgaggaa
gaggagaagccagagagagttcagaccccggagccccacagacggagttaccgggacaac
gaccgccctcgccgttcgccctctccacgctacagacgcagccgttcacccagacggagg
agcagatcacccaagagacgaagcccatcccccagacgagagcgccaccgcagcaaaagt
ccccgtcgccaccgcagccgctcccgagagagacgtcaccgctcaaagtccccaggccat
cacagaagccacaggcatcgcagtcactccaaatccccagagaggagttcaaaaaagagc
cacaagaagagtcgaagagggaacgagtga

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