Salvelinus namaycush (lake trout): 120054601
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Entry
120054601 CDS
T07522
Symbol
nr5a2
Name
(RefSeq) nuclear receptor subfamily 5 group A member 2 isoform X1
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120054601 (nr5a2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120054601 (nr5a2)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
120054601 (nr5a2)
Nuclear receptors [BR:
snh03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
120054601 (nr5a2)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
AvrPtoB_bdg
Motif
Other DBs
NCBI-GeneID:
120054601
NCBI-ProteinID:
XP_038857998
UniProt:
A0A8U1ELV7
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Position
10:4709681..4821587
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AA seq
551 aa
AA seq
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MSSSSPESESDQCNSTEDLTGAGGPPDGAESPAQPSGAVMLPKADTESLGLVRSHGEQGH
MQRNMQAPHYKMMDYSYDEDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYT
CIENQSCAIDKTQRKRCPYCRFQKCLTVGMKLEAVRADRMRGGRNKFGPMYKRDRALKQQ
KKALIRANGLKIEAMTQVMQAVPTDLTISSAIQNIHQAASKGLPLSHHGHPHHAALPHTD
YDRSPFVTSPISMAMPPHAGSLQGYQAAYGHFQSTRTIKSEYPDPYTSSPESIMGYNPYM
DAYQTGSPPSFPHLIVELLKCEPDEPQVQTKILTYLQQEQASRGKHEKLNTFGLMCKMAD
QTLFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHIFRQVMHAKEGSILLVTGQQ
VDYVVIASQAGATLNNLMSHAQELVGKLRSLQLDQREFVCLKFLVLFSLDVKNLENFHLV
ESVQEQVNAALLDYVMCNYPQQTDKFGQLLLRLPEIRAISLQAEEYLYYKHLNGDVPCNN
LLIEMLHAKRA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttccagccctgagagtgagagcgaccagtgcaactctacagaggacctgact
ggtgcaggtggtccaccggacggagctgagtctcccgctcagcccagcggagctgtcatg
ctgcccaaagccgacacggaatctttgggactcgttcgatcgcatggagaacaggggcac
atgcaaaggaatatgcaagccccccactataaaatgatggactactcgtatgacgaagac
ttggatgagatgtgtccggtttgtggcgataaggtttctggataccactatgggctgctc
acctgcgaaagctgcaagggcttcttcaagcgcacggttcagaacaacaagcggtacaca
tgtatagagaaccagagctgcgccatcgacaagacacaaagaaaacgctgcccttactgc
cgcttccagaagtgccttaccgtcggcatgaagctggaagctgtcagggcggaccgcatg
cgtggcggccgcaacaagtttggccccatgtacaagcgcgaccgggcgctcaagcagcag
aaaaaggcactgatccgtgccaacggcctgaagatcgaggccatgacccaggtgatgcag
gcggtgcccaccgacctcaccatctcctcggctatccagaacatccaccaggcagcttcc
aagggcctgccgctcagccaccacggtcacccgcaccacgccgccctgccccacacagac
tacgaccgcagccccttcgtcacgtcgcccatcagcatggccatgcccccccacgccggt
tccctccagggctaccaggcggcctacggccacttccagagcacccgcaccatcaagtcc
gagtacccggacccgtacaccagctcgcccgagtccatcatgggctacaacccgtatatg
gacgcgtaccagacgggctcgccgcccagcttcccgcacctcatcgtggagctgctgaag
tgcgaacctgatgagccccaggtccagaccaagatcctgacctacctgcagcaggagcag
gccagtcgggggaagcacgagaaactcaacacgttcggcctaatgtgcaagatggccgac
cagacgctgttctccatcgtggagtgggcccggagcagcatcttcttccgcgagctcaag
gtggacgaccaaatgaagctcctccagaactgttggagcgagctcctcatcctcgaccac
atcttccgccaggtgatgcacgccaaggaaggctccatcctattggtcaccggccagcag
gtggattacgttgtaatcgcctcccaagctggagccactctcaacaacctgatgagccac
gcccaggagctggtgggcaagctgcgctctctgcagctggaccagagggagtttgtctgc
ctcaagttcctggtgctgttcagcttggacgtgaagaacctggagaacttccacctggtg
gaaagcgtccaggagcaggtgaacgcggcactgctggactatgtcatgtgcaactacccg
cagcagacagacaagtttggccagctgctcctgcggctgcctgagatccgagccatcagc
ctccaggccgaggagtacctctactacaagcacctgaacggagacgtgccctgcaacaac
ctgctcatcgagatgctacacgccaagagagcctga
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