Salvelinus namaycush (lake trout): 120054604
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Entry
120054604 CDS
T07522
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein-like isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120054604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120054604
Membrane trafficking [BR:
snh04131
]
Autophagy
Other autophagy associated proteins
Others
120054604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
UPF0561
Motif
Other DBs
NCBI-GeneID:
120054604
NCBI-ProteinID:
XP_038858003
UniProt:
A0A8U1BMJ7
LinkDB
All DBs
Position
10:complement(5158226..5180554)
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AA seq
995 aa
AA seq
DB search
MEITAEAEDEERRREHWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNHILSHGL
KHEQVYYKQKDYWPFVCCVRYISPHLASHVEQFSKLEPVLNRGIQSVGEGYKAERWLLHS
LQVHLLSAQLRPLLKHQGHTRKYYNVARSVSRLSPFPSLSPSLCLSEEAFLLKEPHVTAM
FQYLEAVEQNNPRLLALVDTVKLSTLKGPPCVGGLLKSHSLCELPGAGGGWRGGLGKGQG
PPREELNHRLTTSQCSLSHRDRGHTLNSINTGVISERNSDSIPSASAPGAPWGCVSGSGG
EGERGVTPPPRPMAAVPHIALTEPASPGPAHSDTLDSGEGDDGPEYLAIGNLVQRCNRRD
SQSSTPSSEPGGSGESGGEVPVQPPMRSSLTVVPPPAPRRSSFSEGQRGQGRGGSKGHIR
SMSDMGINHKHRHESLVGVDCCVTAYSPFSPAISDVSTPSSLYMESNGSQYSSVPDGMFR
KPSEGQSLISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCNLRRRREEEEDGDDS
DSEIQQLKQKIRLRRLQIRRTCLPPSQHLFHSTDSGGSCRSSQDSFHMSDSGSAEEVEEC
ELRDGCEGQSLMAVSRSGLSLSLASLFSDADIKRSVTSSGRSFLTSESISPSFLQSNSAE
SVAMGLLRQFEGMQLPAASELDWLVPEQDAPQKLLPIPDSLPISPDDGEHADIYKLRIRV
RGNLEWAPPRPQIIFNIHPAPKRKIVVAKQNYRCAGCGTRIDPDYIKRMRYCEYLGRYFC
QCCHENAQAVVPGRVLRKWDFSKYYISNFARDLLGKIAGDPLFNPNDINSGLYKKNKALE
TVRVLRVQLFHMKNLFKTCRLAKEVLDQFDSLPGHLTEDLHLFSLNDLSAVRNGVLATRL
RELLKLGSGHVAGCVLCQAKGFVCEFCGNDKDIIFPFELNKCTRCEECKACFHSKCFRAG
KECPRCQRLAERRERMARKNMEEQEDKEEDEGGGS
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggagattacggcggaggctgaagacgaggaacgcaggagggaacactggaagctgctc
tccagtctgaagaccacggtggagggcctggtgtccaccaacaaccctaatgtgtggtct
cgctacgggggtctacagcggctgcacaaggacatgaaccacatcctcagccacggcctc
aagcacgagcaggtgtactacaagcagaaagactactggccctttgtgtgttgtgtccgc
tacatcagccctcacctggcctcgcatgtagaacagttcagtaagctggagcccgtgcta
aacaggggtatacagagtgttggggaaggctacaaggcagagcgctggctattgcacagc
cttcaggtccacctgctctccgcccagctcagacccctgctcaaacaccagggacacacc
cgcaagtactacaacgttgctcgctctgtctcacgcctctcccccttcccttctctctct
ccctcgctctgtctctcagaggaggcctttctcctaaaagagccccatgtgacggccatg
tttcagtatcttgaggccgtggaacagaacaacccccgtttgctggcactcgttgacact
gtcaagctgtccactctgaagggccctccgtgtgtggggggcctgttgaagagccatagt
ctgtgtgagctgcctggggccggaggaggctggaggggcgggctgggcaagggccagggg
ccccccagggaagagctcaaccacaggctcaccacctcccagtgctccctctcccaccga
gacagaggacacacactgaacagcataaacacaggggtcatctcagagaggaactcagac
tctattccatcagccagcgccccgggagccccttgggggtgcgtgtcagggtccgggggg
gagggcgagaggggtgtgactcctcctccccgccccatggcagctgtcccccacattgcc
ctgaccgagcccgcctccccaggccctgcccactcagacaccctagactctggcgagggc
gacgacggcccagagtacctggccatcggtaacctggtgcaacgctgcaatcgccgtgac
tcccagagctccacccccagcagcgagcccggcgggagtggcgaatcaggtggcgaggtt
ccggtccagccgcctatgcggagctccctgactgtggtcccgcctcccgctccgcgaagg
tcatccttctcggagggacagagggggcagggtcgcgggggcagcaaggggcacatccgc
tcgatgtctgacatggggatcaaccacaaacatagacatgaatcgttggttggagtggac
tgctgtgtcacggcctacagccccttctcccctgccatcagtgatgtcagcacacccagc
tccctctatatggagtcaaatggctcccagtacagcagtgttccagacggcatgttccgg
aagccgtcagagggccagagcctcatcagctacctatcggagcaggacttcggcagctgt
gctgacctggagaaggagaatgcccacttcagcatctctgagtctctgattgccgccatc
gagctgatgaagtgcaacctgcggcggcggcgggaggaggaggaggatggcgacgacagc
gactcagagatccagcagttaaaacagaagatccgcctgcgcaggctgcagatccgacgc
acctgcctgccaccctcacagcacttgttccactccacagacagcggaggctcctgcagg
agctcccaggattcctttcacatgtccgactcgggctctgccgaggaggtggaggagtgt
gagctgagagatggctgtgagggccagtccctgatggcggtgtcaaggagcggcctctcc
ctgtcgctcgcctccctcttctcagatgcagacataaagcgcagtgtgacgtccagtggc
cgctcgttcctcacctcagagtctatctctccgtcgttcctccagtctaactcggctgag
tcggtggccatggggctgctcaggcagtttgagggcatgcagctccccgcagcctcggag
ctcgattggctggtcccagagcaagacgcaccgcagaagctcctgcccatccctgactcc
ctgcccatctctcctgatgacggggagcatgctgacatctacaagctgaggatccgggtg
cgagggaacctagagtgggccccgccccgaccccagataatcttcaacatccaccccgcg
cccaagaggaaaatagttgtggcgaagcagaactaccgctgtgcaggctgcgggactcgc
atagacccagactacattaagcgaatgcgctactgtgagtacctgggccgctacttctgc
cagtgttgccacgagaacgcccaggcggtggtgccgggccgcgtgttgaggaagtgggac
ttcagcaagtactacatcagcaacttcgcccgggacctgctgggcaagatcgccggagac
cccctgttcaaccccaacgacatcaacagtggcctctacaagaagaacaaagccctggag
actgtccgggttttgagggtccaactcttccacatgaaaaacctcttcaagacatgccgc
ctagctaaagaagtgctggaccagtttgacagcctcccaggtcacttgactgaggacctg
cacctattctccctcaacgacctcagtgctgtgcgcaacggagttctggccacccggctt
cgagagctgctgaaattgggttccgggcacgtggctggctgtgtgctctgtcaggccaag
ggttttgtgtgtgagttctgcggcaacgacaaagacatcatcttccctttcgagctgaac
aagtgcacacgctgcgaagagtgcaaggcgtgtttccacagcaaatgtttccgggcaggc
aaggagtgcccacgatgccagcgcctggcagagaggcgggaaaggatggcacgcaagaac
atggaggagcaggaggataaggaagaggacgagggaggcgggagctag
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