Salvelinus namaycush (lake trout): 120054608
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Entry
120054608 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120054608
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120054608
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120054608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf-RING_16
zf_RING_Vps8_fungal
DUF7027
Glucos_trans_II
RINGv
PHDvar_NSD
zf-RING-like
zf-RING_4
PHD
zf-RING_Vps41
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
120054608
NCBI-ProteinID:
XP_038858008
UniProt:
A0A8U1BK16
LinkDB
All DBs
Position
Sna10:complement(5353355..5455935)
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AA seq
378 aa
AA seq
DB search
MLFSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADISAYTFDNKTGNFDDLPARFGHWLP
SDGLKGFLIGARPENACEPIDPPPIRDNLTGAFIVLIRRFDCNFDIKVLNAQKAGYKAAI
VHNVDSDDLISMGSNDLDILKQIDIPSVFVSEETANSLKKDYTYDKGGHVVLMPDFSLPL
EYYLIPFLIIVGICLILIVVFMITKFVQGRHRARRSRLRKDQLKKLPIHKYNKGDAYDVC
AICLDEYEEGDKLRVLPCSHAYHNKCVDPWLTKTKKTCPVCKQKVVPSAGDSDSDSEEGD
SGPDENEVSESTPLLRSLASTSGHSFGTMSGASRSEPDQESSEYEDDHLDTSDDSEVTVE
TVVQLQEPRPDDHDPVRA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctccctggggatgctgatgctgtccgccacacagatctacaccatcttcacc
gtgcagctctttgccttcctcaacctgctgcctgtcgaggccgacatctctgcctacaca
tttgacaacaaaacaggaaactttgatgacctgcctgcacggtttgggcactggttgccc
agcgatggactcaagggcttcctgattggtgcacggcccgaaaatgcctgcgaacccatt
gacccgccccctattcgggacaacctcactggtgccttcatcgtgctcatcaggcgcttc
gactgcaactttgacatcaaggtccttaacgctcagaaggccgggtacaaggcggcgatt
gttcacaacgtggactctgatgacttaatcagcatgggatccaatgatctggatattttg
aagcagattgacattccatcagtgtttgtgagcgaagagactgccaactccctgaaaaag
gactacacgtatgacaaggggggtcatgtggtcctcatgccggacttcagcctgcctctg
gaatactacctgatccccttcctcatcattgtgggaatctgcctcatcctcatcgtcgtt
ttcatgatcaccaagtttgtccagggcagacacagggctcggagaagccgtctgcgcaag
gaccagctcaagaaacttcccattcacaagtacaataaaggggatgcctacgatgtgtgt
gccatatgcctagatgagtacgaggagggagacaagctccgggtcctgccctgctctcac
gcttaccacaacaagtgtgtggacccctggctgaccaagaccaagaagacgtgtcctgtg
tgcaagcagaaggtggtcccctctgcgggcgactcagactccgattcggaggagggcgac
agcgggcccgatgagaacgaggtgtcagagagcaccccgctgctgcgctccctggcctcc
accagcggccactcctttggcaccatgtcgggcgcctcacgttccgagcccgatcaggag
tcctccgagtatgaagacgaccacctggacaccagcgacgacagcgaggtcaccgtggag
acagtggtgcagctgcaggagcctcgtcctgacgaccacgacccagtccgcgcctga
DBGET
integrated database retrieval system
