Salvelinus namaycush (lake trout): 120054616
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Entry
120054616 CDS
T07522
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S-like
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120054616
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120054616
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120054616
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
120054616
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
120054616
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Type II RPTP family
120054616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Ig_3
I-set
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_2
ig
Tc-R-P
PTP-SAK
DSPc
V-set
PTPlike_phytase
Y_phosphatase3
DUF5849
MpPF26
Motif
Other DBs
NCBI-GeneID:
120054616
NCBI-ProteinID:
XP_038858022
UniProt:
A0A8U1BRH0
LinkDB
All DBs
Position
Sna10:complement(6368673..6570343)
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AA seq
1919 aa
AA seq
DB search
MAAGGPPCLSLPALLPLCALLLCLLFTGSHALSPPRFTKVPVDQIGVSGGVVSFVCQATG
DPKPRVSWNKKGKKVNSQRIETIEFDEGAGAVLRIQPLRAPRDENIYECVAENSEGEVNV
NAKLSIIREDLLPTGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPIDPN
ASNGRIKQLRSEAFEGTPIRGALQIENSEETDQGKYECVASNVEGVRYSSPANLYVRVRR
VPPRFSIPPTSHEIMPGGSVNITCVAVGSPMPYVKWMLNSEDLTPEDEMPVGRNVLELNS
VRESANYTCVAMSSLGIIEAVAQITVKSLPKPPGIPMVTETTATSVTITWDSGNPDPVSY
YIIQYRAKSPDSKFETMDGITTTRYSIGGLYPNTEYEIRVSAFNTIGQGPPSEPVETRTG
EQAPASPPRNIQARIISQNTMMVRWDEPEEPNGQIKGYRVYYTMDPSQLMSLWQIHNVQD
SIITTIQSLVASETYTIRVLAFTSVGDGPFSDPIHVKVLQGVPGQPTKFQVGAVSDTSIE
LTWEPAFEKEGIINFELRYKEGSFGSQVTKTFGPTASYVVEGLRANTEYYFSLAAISNKG
IGAFTNEISQKTSQAKPSAPPQDIKCSSSSSTTLLVSWRPPPVESQNGALAGYLVRYQVV
GASVEGGGGGAGEPMEEPAVPPRDGQVLLQKLEKWTQYRVTLAAFTEIGPGPESEPLLCR
TDEDVPGAPPRRVEVEVLNSTALKVMWRSLLPGRQHGQIRGYQVHYVRVENGESRGLPLI
KDVMLADAQEMVIGGLQPDTTYSITVAAYTTKGDGARSKPKLVVTKGAVPGPPYLSVAHD
SETSAVVRWDAPDVMIPGMELQGYRLQFGRKDVSPLATLEFTPQERQYTVASVHRGATYL
FKVQAKSRGGFGEEATAELHVPEQTPQGYPQISESSNVTCCSVELAWSPPVLAERNGDIT
EYTLAYQETGVGGAPRELSLPAIQSSYVLNSLKPNSAYDVKIRAHTSVGPGPYSPPIQYR
TVAFETDVPKNFTVKWVTKTTVLLTWKFAERRFPFRCTIEYNRQKMDVDARLTKALVTSL
RPNTTYEFRVTCQENTEGGPRHRVVARTAPPILVKKPRLELYSEPDNILTMGFTPVESKD
IKNFYVVVVPLKKGSGAARHHKNPEEMDLEELLRDITPKRRTRRQLSQADGKRPYITACF
KQLPATFTLGTEHRHSSCENKPLEPGQEYVFFLLAELNTTAGKMFAASPYTDPVVTPEME
VDPLPIETGGDGLIWVVGPVLAVVFIICIVIAILLYKNRKRKESEPRTKCLLNNAEITPH
HPTDPVEMRRINFQTPGMMNHPPIPIAELAEHTELLKANDNLKLSQEYESIDPGQQFTWE
HSNLEVNKPKNRYANVIAYDHSRVILAPIEGIIGSDYINANYIDGYRKQNAYIATQGPLP
ETFGDFWRMVWEQRAATVVMMTRLEEKSRIKCDQYWPSRGTETYGMTQVTLLDTIELATF
CVRTFSLHKNGSSEKREVRQFQFTAWPDHGVPEYPTPFLAFLRRVKTCNPPDAGPIIAHC
SAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRSQRNYMVQTEDQYSFIHDALLEAV
ACGNTEVAARSLYSYIQKLAQVETGEHVTGMELEFKRLANSKAHTSRFISANLPCNKFKN
RLVNIMPYETTRVCLQPIRGLEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLW
ENNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDAR
DGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGV
FITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDEYQFSYQAGLEYLGSFDHYAT
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggcggtccaccctgcctttctctgccggccctgctgcccctctgcgctctg
ttgctctgtttgctgttcactggctcccatgccctatcaccaccaaggttcactaaagtt
cccgtcgaccagatcggtgtatccgggggcgtggtctcgttcgtgtgccaggcgacggga
gaccccaagcctcgggtgagctggaacaagaaggggaagaaggtcaactcccaacgcatt
gagactatagagttcgatgagggcgccggagccgtgcttcggatccagcctctacgagcg
ccgcgggatgagaatatctacgagtgcgtggcggagaacagcgagggcgaggtcaacgtc
aatgccaagctgtccatcatcagagaggacttgctcccgacaggattccccaacatagac
atgggtccccagctcaaagtggtggagcgcacacggacggccaccatgctttgcgctgcc
agcggcaaccccgatccagaaatcacctggttcaaggacttcctgcccatagaccccaac
gcaagtaacgggcgaatcaaacagctgcgctcagaagcctttgagggtacccccatccga
ggtgccctgcagattgagaacagcgaggagacggaccaggggaagtacgagtgcgtggcg
tctaacgtggaaggcgtgcgctactcatcccctgctaacctatatgtgcgagtccggcgc
gtgccccctcgcttctccatcccgccgaccagtcacgagatcatgccaggtggcagtgtg
aacatcacctgcgtggcggtagggtcgcccatgccctacgtcaaatggatgctcaactcg
gaggacctgacgccggaggacgagatgccggtaggccggaacgttctggagctcaacagc
gtgcgagagtcggccaactacacatgtgtggccatgagcagtctgggcatcatcgaggct
gtcgcgcagatcacagtcaagtccctgcccaagcccccaggcatacccatggtgaccgag
accacggccaccagcgtcaccatcacctgggactcgggcaacccggaccctgtgtcctat
tacatcatccagtaccgcgccaagtctcctgacagcaagtttgagaccatggacggcatc
actaccacgcgatacagcatcggaggcctttaccccaacacagagtatgagatccgcgtt
tcggccttcaacacgatcggccagggcccccccagtgagccggtggagacccgtaccggg
gaacaagccccggccagtccgccccgcaacatccaggcccggatcatctcccagaacacc
atgatggtccgctgggacgagcctgaggagcccaacgggcagatcaaagggtaccgggtg
tactacaccatggacccatcccagctcatgagcctatggcagatccataatgtccaggat
agcatcatcaccaccatccagagcctggtggcgtctgagacctacaccatccgtgtcctg
gcctttacatcggtgggcgatgggcccttctctgaccccatccacgtcaaagtgctgcaa
ggagtccccggacagccaacaaagttccaggttggcgctgtgtccgacacaagcatcgag
ttgacctgggaacctgcctttgagaaggagggaatcatcaactttgagcttcggtacaaa
gagggcagttttggcagccaggtgaccaaaacctttggccccactgcctcatacgtcgtt
gagggtctgcgagcaaacacagagtactacttctctctggctgccatttccaacaaaggc
attggagccttcaccaacgaaatatcccagaaaacctcgcaagccaagccctcagccccc
cctcaagatattaagtgcagcagctccagctccaccaccctactggtaagttggcgcccc
ccgcctgtggagagccagaatggcgccctggcggggtacctagtgcgctaccaggtggtg
ggagcctccgtagagggtggaggcggcggtgctggagaacccatggaggagccggccgtg
ccgcccagggacgggcaggtgctgctgcagaagctggagaagtggacccagtaccgtgtc
accttggccgccttcaccgaaatcgggccgggcccagagagcgaacccctgctctgccgc
accgacgaggatgttccaggggctcctcctcggcgggtcgaggtggaggtgctcaactcc
acggcgctcaaggtcatgtggcgctccctgttgccggggcgacagcacggccagatccgt
ggttaccaggtgcactatgtgcgcgtggagaacggagaatcgcgtggcctgcctctcatc
aaggatgtcatgctagccgacgcccaggaaatggtcatcggcgggctccagccggacacc
acctactccatcacagtagctgcgtacaccaccaagggagatggagcacgcagcaaaccc
aaactggtggttaccaaaggagcagtgcctgggccgccctatctgtcggtggctcacgat
tcagagacgtcggccgtggtgcgctgggacgcacccgatgttatgatccctggcatggag
ctgcagggttacaggcttcagtttggccgcaaggacgtgtccccactggccactctggag
ttcaccccccaggagaggcagtacacagtggccagcgtccaccgcggtgccacctacctc
ttcaaagtccaggctaagagccgaggtggcttcggggaggaggctacggccgaactgcat
gtgcctgaacaaacaccccaagggtacccccaaatcagcgagagctccaacgtgacctgc
tgctcggtagaattggcgtggtcgcccccggtgctggcagagcgcaacggggacatcacg
gagtacacgctggcgtaccaggagactggcgtggggggcgcaccccgggaactcagcctg
cccgccatccagtccagctacgtgctcaacagcctaaaacccaactcggcgtacgacgtg
aaaatacgcgcgcacacgagtgtaggtccagggccctacagcccgccgatccagtatcgg
actgtggcgtttgagacagatgtcccgaagaacttcacagtgaagtgggttaccaagaca
acagtgttgctaacgtggaagtttgctgagaggcggttcccattccggtgcacgattgag
tacaatcgccagaagatggacgtggacgcccggctgaccaaggcgctggtcaccagcctg
cggcccaacaccacctatgagttccgggtcacgtgtcaggagaacacagagggtggacct
cgccaccgtgtggtcgctaggactgcaccgcccattctggtcaagaagcccaggctggaa
ctctactcggagccggacaacattctgaccatgggtttcaccccggtggaaagcaaggac
atcaagaatttctatgtggtggtggtaccactaaagaagggctcgggagcagcccgacat
cacaagaacccagaagagatggacttggaagagctgctgagggacatcaccccgaaacgt
cgcaccaggcgccagctgagccaggcggacggcaagaggccctacatcacagcctgcttc
aagcagctccccgccacgttcaccctgggcacagagcaccgccacagcagctgtgagaac
aaacctctggagcccgggcaggagtacgtcttcttcctgctggccgagctcaacaccacg
gccgggaaaatgtttgcggccagcccgtacacggatccagtggtgaccccagagatggaa
gtggatcctctgcccatcgagacgggcggagatggcctcatctgggtggtggggcccgtg
ctggccgtggtcttcatcatctgcatcgtcatcgccatcctcctctacaagaaccgtaaa
cgaaaggagtcagagcccagaacaaaatgtctgctgaacaacgcagagatcacaccccac
catcccacagaccccgtggaaatgaggcgcatcaacttccaaaccccaggtatgatgaat
catccacccatccccatcgcggagctggctgaacacacggagcttctcaaagccaacgac
aacctgaagctctcccaggagtatgagtccatcgatccgggccagcagtttacatgggaa
cactccaacctggaggtgaacaagcccaaaaaccgctatgccaatgtcatcgcctacgac
cactcccgcgtcatcctcgcacccatcgaaggtatcataggcagcgactatatcaacgcc
aactacatagacggttacaggaagcagaatgcctacatcgcaacgcagggtcctttgccc
gagacgttcggggatttctggaggatggtgtgggaacagagggcagccactgtggtcatg
atgaccagactggaagagaaatcacggatcaagtgtgaccagtactggcccagtcgagga
acagagacctatgggatgacccaggtgactctactggacaccatagagctggccaccttc
tgcgtccgcaccttctccctgcacaagaatggttccagtgagaagcgggaggtccgtcag
ttccagttcacggcgtggcctgaccacggggtccccgagtaccccacccccttcctggcc
ttcctacgcagagtcaagacctgtaacccccctgacgcaggccccatcatcgcccactgc
agtgcgggcgtcggaaggacgggctgcttcatcgtgatcgacgccatgctggagcgcatc
aagcacgagaagacggtggacatctacggccacgtgaccctgatgcgatcgcagcggaac
tacatggtgcagacggaggaccagtacagcttcatccacgacgcgctgctggaggcggtg
gcgtgcggcaacacggaggtggcggccaggagcctgtactcgtacatccagaagctggcc
caggtggagacgggcgagcacgtcaccggcatggagctggagtttaagcgcctggccaat
tccaaggcccacacgtccagattcatcagtgccaacctgccctgcaacaagttcaagaac
cgtctggtgaacatcatgccctacgagaccacccgcgtctgcctgcagcccatcaggggc
cttgagggctccgactacatcaacgccagcttcatcgacggatacaggcaacagaaggct
tacatcgccacgcagggcccgttggcagagaccacagaagacttctggaggatgctgtgg
gagaacaactctaccatcgtagtcatgctcaccaaactccgagagatgggcagggagaag
tgccatcagtactggcccgctgagcgttcggccaggtaccagtactttgtggtggacccc
atggccgagtacaacatgccccagtacatcctccgggagttcaaagtcaccgatgccagg
gatgggcagtccaggacagtgcggcagttccagttcactgattggccggagcagggggtg
cccaagtcaggggagggcttcatagacttcataggccaggtgcacaaaactaaggagcag
ttcggccaggacggacccatctctgtccactgcagtgcgggagtcggccggaccggtgtt
ttcatcacgctcagcatcgtgctggagaggatgcgctacgagggcgtggtggacatcttc
caaacggtcaagatgctgcggacacagaggccggccatggtgcagacagaggatgaatat
cagttttcctaccaggcgggtctggagtacctaggaagctttgatcactatgcaacgtaa
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