Salvelinus namaycush (lake trout): 120054622
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Entry
120054622 CDS
T07522
Name
(RefSeq) platelet glycoprotein V
KO
K06260
platelet glycoprotein V
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120054622
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
snh04090
]
120054622
CD molecules [BR:
snh04090
]
Proteins
120054622
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
LRR_9
LRR_LRWD1
DUF3246
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
120054622
NCBI-ProteinID:
XP_038858039
UniProt:
A0A8U1EH77
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Position
Sna10:complement(7681726..7690159)
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AA seq
663 aa
AA seq
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MWSVLLFLLVQPLLTDSMVCPSSCMCNLEGAVKCVGNIRDVPKGMPTNMYLLQLNGTNMK
VLNEQSLAMLPLMLRLGISQSPLDTIHPEAFHVAPQLLSIKLSSNALSSLPSRVFSRLVS
LEQLHLDDNRLESIAPVLFEGLANLHELDVSNNAIAHLAPNVFHGLSSLRYLNLGRNSLQ
QLPPTLFHSLTRLQFLMLYNNKLERLEVGAFDELANLLELKLHNNQIAHIPPEVFWALGN
LMTLTMSSNQLQGVPNESFYHLPKLTKLTIYKNPLLSLPDKLMGQMPGMKEFYLYATNLS
TVPWSLFANMSGMERLSLHLNNKLRELPPDLFCCLPNLQKLSLKSNDIQDLHPDIFSKLA
NMNTLLLNDNKLRSLSEDIFKGNPSLASIELKNNQLRTLPGEVFSTAEGLRVVTLSGNPW
DCRCGIRDIASWIKLNEGMVSDLTDVICRNPYPLLLRPLGSLLDEEFKCDVTTPSSSRTT
RSSIELIHVVSTTALEEQEAVEFTPTTTAPEAPSTQQTENPTESVRFTTPGLRRTTAATP
TADVLDILDDDYIFKPMGTESLPVHFLSPPFHDRLVFENGLEFVHNIRLKGWVYLWTLPP
NGAYVGFLMALHILLVATGVALILAAMYGMYRLHQATEDLGAILTNRKHTIISERKQKDP
DEL
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcgtattactctttctcctggtccagcctttgctcaccgacagcatggtctgc
cctagcagctgcatgtgcaacctagagggggccgtcaaatgtgtgggcaacatcagggac
gtgcccaaaggcatgcccaccaacatgtacctacttcagctgaatggcaccaacatgaag
gttctgaacgaacagagtctggccatgttgccccttatgctgcgtttaggcatcagccaa
agccctctggacaccatccaccctgaggccttccatgtggccccgcagctcctctccatc
aagctgtcatccaacgccctctccagcctcccttcccgggtgttcagccgcttggtcagc
ctggagcagctgcatctggatgacaatcgtctggagtccatcgctcccgtgttgtttgag
ggtctggccaacctgcacgaactggacgtcagtaacaacgccatcgctcacctcgccccc
aatgttttccacggactgagtagcctgcgctatctcaacttggggagaaactccctgcag
cagctgccccccaccttgttccactcattgacgcggttgcagttcctcatgctctacaac
aacaagctagagcggctggaggtaggcgccttcgatgagctggccaacctcctggagctc
aaactgcacaacaaccagatcgcccacatcccccccgaggtgttctgggccctaggcaac
ctcatgaccctcaccatgtcctccaaccagctccagggcgtcccgaatgaaagcttctac
caccttcccaaactcaccaagctcaccatctacaaaaaccctctgctgtcactgcctgat
aagttgatgggccaaatgcccgggatgaaggaattctacctgtatgccaccaacctcagc
accgtgccctggagcctgtttgccaacatgagcgggatggagaggctctccctgcacctc
aacaacaagctgagggagctgccccctgacctcttttgctgcctgcccaacctccagaag
ctttccctcaagtccaacgacatccaggatctacatccagatatcttctccaagctggcc
aatatgaacactctgctcctgaatgacaacaagcttcgctccctttctgaggacatattt
aagggcaaccccagtttggccagcatcgagctgaagaacaaccagctgcggacccttccg
ggggaggtcttctctactgcagagggtttaagggttgttactctgagtggcaacccatgg
gactgcaggtgtggcatcagagacattgcaagttggataaagcttaatgaaggcatggtt
agtgatctgacggatgtgatatgtcgtaatccgtaccctctacttctccgcccacttggt
tccctactcgacgaagagtttaagtgtgacgttaccacaccctcgagcagccgcaccacc
cgctcttcgattgaactcatccatgtcgtttccactacagctcttgaggagcaagaggct
gtagaattcacacccacaactactgcacccgaggctccatcaacccaacaaacagaaaat
cctactgagagtgtcaggttcaccacacctgggttgaggcgcacaacagctgctacaccg
accgccgacgttctcgacattcttgacgacgactatatattcaagcctatgggcactgaa
tcgctccccgtccatttcctatccccgccctttcacgacaggctggtgtttgagaacggg
ctcgagtttgtgcacaacatccgcctaaagggctgggtttacctgtggacgctgccaccc
aatggggcttacgttgggttcctcatggctctccatatccttctagtggccacaggcgtg
gccctgattctggctgccatgtacgggatgtaccgtctccaccaggccacggaagaccta
ggagcaatactcacaaacaggaaacacaccatcatatcagagaggaagcagaaagaccca
gatgaactgtag
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