Salvelinus namaycush (lake trout): 120054623
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Entry
120054623 CDS
T07522
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120054623 (ccdc50a)
Membrane trafficking [BR:
snh04131
]
Autophagy
Other autophagy associated proteins
Others
120054623 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
120054623
NCBI-ProteinID:
XP_038858040
UniProt:
A0A8U1BK29
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Position
Sna10:7706956..7738456
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AA seq
658 aa
AA seq
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MAEFPIDQNKLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDVALAK
QLQEEEDRRAQAKAKRQHRDIERSDNEIAQEIQEELVRQAEQQRKQEEKDAAIARKLQEK
EMKEERKRQKQLEANFEEEYYEDKGAIRAPLDLDDKPRRPGSNSHSPESHPLTPGSRRDL
SPKYVSFEPSRTRYPLYDSVEPSTSGRSRSPEHHLESRGGGSRGKHGDPYPEDHLSNSRG
KHGGSYPDYHHPTEGRSRGKGGQRGRDPQGSQSTYPDSREPRRHREERGDEGERVVVRRK
ERPARPPPQSHNPVEGDEAWEREREREWEKDRQREPRRDEERERDAPRHEERSRDGQRHG
QRSQDQEHSRDKHREKDRRRERTKSRERGLDEDYYEPIPSSHSRAWTVGGEEGPGDEGEW
GPMARLHSGPSELCEEEARSPRVMRGERRGHRDPGEGPSMGTERSYTHPAPREPGRIVQG
GPGGRGAVVVGGEYGMGEATQGIAKLDLREQEILDMEVARKLQEEEVKASKMDKRAAQVA
QDEEIARLLMEQEKKEYKKSREKEKQGMRPEERGMRPEERRRPEGGEFKSNSEEVVRPRS
REEEYQRHRNHQKPARPPQPLPHDYENVETSYSYSESHYSSRTPARPEAAYKGTYYRQ
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatttcccatcgatcaaaacaaactgcccggagtaaaagaagtgtgtcgagac
tttgctgtgctggaggaccactgcctggcccataatctccaggagcaggaaatcgagagc
cacttggcatccaacgtccacaagagccgtctagtgcagcaggacgtagcgttggccaag
cagctgcaggaggaggaggaccggagggcccaagccaaggccaagagacaacaccgggac
attgagcgcagcgacaatgagattgcccaggagatacaggaggaattggtccgacaggcg
gagcagcagcgcaagcaggaggagaaggatgcggccatcgctcgtaagctgcaggagaag
gagatgaaggaggagaggaagcgacagaagcagctggaggccaactttgaggaggagtac
tacgaggataaaggagccatccgagcccctctggacctggatgacaaacccaggcgacct
ggttcaaactcccactcccctgagtcacatccccttaccccgggctcacgacgcgacctc
tcccccaagtacgtttcttttgagcctagcaggaccagataccccctatacgactctgtg
gagcctagcaccagcggacgttcccgatcccccgagcaccatttagagagtaggggaggg
ggtagtaggggcaagcatggagacccataccccgaggaccacctctccaatagcaggggg
aaacatgggggcagttacccagactaccaccaccccaccgagggtagaagtagagggaag
gggggccagaggggccgagacccccaggggtcccagtccacctacccagacagccgtgag
cccaggagacacagggaggagagaggggatgagggagagcgggtggtggtgaggaggaag
gagaggcccgcccggccgcctccgcagtcccacaaccctgtggagggagacgaggcctgg
gagagagaaagagagcgggagtgggagaaagaccggcaaagagaacccaggagagacgag
gagagggagagggacgccccgagacacgaggagagatcgcgagacggacagagacatggg
cagcgatcgcaagaccaagagcatagccgagacaaacacagagaaaaagacagacgccga
gagagaaccaagagcagggagcgaggtctggatgaagactattacgagcccatacccagc
agccacagccgagcctggactgttggtggggaggagggccctggggatgagggggagtgg
gggcccatggccaggctccactctggccccagtgagctgtgtgaggaggaggccaggagc
ccccgcgtgatgaggggggagaggagaggtcacagggaccctggggaggggcccagcatg
ggcacggagcgctcctacacgcaccccgctcccagggagccaggtcgtatcgtgcaagga
ggaccagggggtcgcggcgcagtggtggtcggaggggagtacgggatgggcgaggccacc
cagggcatcgccaagctggatctgagggagcaggagatcctggacatggaggtggcccgg
aaactacaggaggaggaggtcaaggcgagcaagatggacaagcgcgcagcccaagtggct
caggatgaggagatagcccgcctgctgatggagcaggaaaagaaggagtacaagaagtcc
agggagaaggagaagcaggggatgaggccagaagagagggggatgaggccggaagaaagg
aggcggccagagggaggagaattcaagtcaaactcggaggaggtagtgcgtcccaggtcc
cgagaggaggagtaccagaggcacaggaaccaccaaaagcctgccagacctcctcaacct
cttccacatgactacgagaatgtggagaccagctacagctactcagagagccactactct
tcccgcactccagccagacctgaggctgcttacaaaggtacctattacaggcagtga
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