Salvelinus namaycush (lake trout): 120054666
Help
Entry
120054666 CDS
T07522
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00061
Fatty acid biosynthesis
snh00071
Fatty acid degradation
snh01100
Metabolic pathways
snh01212
Fatty acid metabolism
snh03320
PPAR signaling pathway
snh04146
Peroxisome
snh04216
Ferroptosis
snh04920
Adipocytokine signaling pathway
Module
snh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120054666
00071 Fatty acid degradation
120054666
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120054666
09143 Cell growth and death
04216 Ferroptosis
120054666
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120054666
03320 PPAR signaling pathway
120054666
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snh01004
]
120054666
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120054666
Enzymes [BR:
snh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120054666
Lipid biosynthesis proteins [BR:
snh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120054666
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120054666
Exosomal proteins of breast cancer cells
120054666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120054666
NCBI-ProteinID:
XP_038858125
UniProt:
A0A8U1C125
LinkDB
All DBs
Position
Sna1:complement(25091870..25101560)
Genome browser
AA seq
717 aa
AA seq
DB search
MHFQEWLKSLRTSGGVRGPVNKDFWSLVPFLPLSSSFSFSSLSLSPSSLLGIGALASFTA
YWLVTRPRPMRPPCDLNAQSIPVQGEPNWRRSALLKDDVLLEFYYDDTRTAYDMFQRGLR
VAGDGPCLGFRKPGEPYQWISYTEVAEQAQVLGSGLLGKGCQPKPEQLVGIFAQNRPEWI
ISELACYTFSMAVVPLYDTLGEEAMVHILNLAEISLVICDKEEKAESLLGNKEKGVTPTL
SCLVLFNPCSDAIVERGKNCGVEILELTQLMELGRQNLRDPAPPQPQDLAVVCFTSGTTG
KPKGAMITHGNIASNSSSVIKILEGSFVIQQEDVSISYLPLAHMFERMIQVSMLCHGARV
GFYQGDISLLMDDIKTLKPTFFPVVPRLLNRIYDKILGSVTSPLRRAVLHYAVRRKQAEL
SSGVVRNNSLWDWLVFNRIQANLGGNLRFILTASAPIAPTVLSFLRATLGCLIFEGYGQT
ECTAGCTFSMPGDWSAGHVGAPLPCAMVKLIDIPDMNYYAKNGEGEICIRGHSVFRGYLK
DEEKTTEALDSDGWLHSGDVGQWLPNGTLRIIDRKKHIFKLSQGEYIAPEKIENVYMRCV
PVLQVFVHGDSLQSQLIGIVVPDPEVFIDWVKERGIFGSYEELCQNPDVKKEVLEDMTAV
GKEAGLKSFEQVKDLHLHPEMFSVSNGLLTPTLKTRRVDIHRVFQEQITNMYSTTAI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcaggagtggttaaagtcccttcgtaccagtgggggggttcgaggacctgta
aacaaagacttctggagccttgtcccctttctccctttgtcgtcctctttctccttctcc
tccctctctctatccccgtcctctctgctgggtataggtgctctggcctccttcactgca
tactggctggtgactcgccctcggcccatgcgccccccttgtgatctgaatgcccagtct
atccctgtacagggagagcccaattggaggcgttcagctttgctcaaggacgatgtcctg
ttggagttctactatgatgacaccaggacagcctatgacatgttccagagaggactgaga
gtggcaggggatggcccatgccttggcttcaggaaacctggggagccttaccagtggatc
tcctacactgaggtggctgaacaggcacaggtgctgggctctgggcttttgggcaaaggc
tgccaaccaaaacctgagcagttagttggaatatttgcccagaacaggccagagtggatc
atttcagagctggcctgctacaccttctctatggctgtggtgcccctgtatgacacactt
ggagaggaggccatggtgcatatcctcaacctggctgagatctccctggtgatctgtgac
aaggaggagaaggcagagtcccttctggggaataaggagaagggtgtgacgcctactctc
tcctgtctggtgctcttcaatccctgcagtgatgccatagtggagagggggaagaactgt
ggagtggagattctagaactcacacagctcatggaacttggacgacagaacctcagagat
cctgcgccaccccaaccccaggacctggcagtcgtgtgcttcaccagtggaaccacagga
aagcccaagggagccatgatcacccacggcaacatcgcctccaattcctcctctgttatt
aagatcctggaggggtcatttgtaattcagcaagaggacgtgtccatatcttacctgcct
cttgcccacatgtttgagaggatgattcaggtgtccatgctatgtcatggggccagggta
ggattctaccagggggatatctccctgcttatggacgatattaagactctgaaacccacc
ttcttcccagtggtgcctcgcctgctcaaccgcatctacgacaagatcttaggctccgtg
acgtccccattacgccgggcagtgctgcactatgcagtgaggaggaagcaggctgagctc
agcagtggggtggtacgtaacaacagtctgtgggactggctggtgttcaacaggattcag
gctaatttaggaggtaatctgaggttcatcctgaccgcctctgcgcccatcgcccccacc
gtgctctccttcctcagggccaccctcggctgtctgatcttcgagggctacgggcagact
gaatgcacagcaggctgcaccttctccatgccaggtgactggagtgcaggccatgttggt
gctccattgccctgtgccatggtgaagttgattgacattcctgatatgaactattatgcc
aagaacggagaaggagagatctgtatccgtggccacagtgtgttccggggatacctgaaa
gatgaggagaaaacaacagaggccctggacagtgatggctggctgcacagtggagacgtg
ggccagtggctaccgaatgggacacttcgtatcatcgacaggaagaagcacatcttcaag
ctgtcccagggagagtacattgcccctgagaagattgagaatgtctacatgcgttgtgtc
cctgtgctacaggtctttgtgcacggagacagcctacagtctcaactgatcggtattgtt
gtgccagacccagaagtgttcattgactgggttaaggagaggggaatctttggatcctat
gaggaactctgccagaatccagatgtgaagaaagaagtgttagaagacatgacagccgtg
gggaaggaagctgggctgaagtcatttgagcaggtgaaggatctgcacctgcatccagag
atgttcagtgttagcaacggtctcctcacccccactctgaagaccagacgagtggacatc
cacagggtcttccaggaacagatcacaaacatgtatagcacaacagccatctag
DBGET
integrated database retrieval system
