Salvelinus namaycush (lake trout): 120054675
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Entry
120054675 CDS
T07522
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snh03009
]
120054675 (wdr18)
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
120054675 (wdr18)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_alt
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_EML
WDR55
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_VPS8
Ge1_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
120054675
NCBI-ProteinID:
XP_038858133
UniProt:
A0A8U1ELZ5
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Position
Sna10:complement(11729912..11827577)
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AA seq
431 aa
AA seq
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MSAPMEIVLSADSAGQLWNCAVLELHSGTNLLAYRGGNTSSRSLTVLNGEYILGAQLGKN
FINVWEIQRKDQLQQKIVCPGIVTCLTASPNGLYLVAGIADAIYLWEVSSGNLLAILSRH
YQDLTCLRFSDDSSHFISGGKDNLALVWSLASVVQLDPSHTPEPRHVLSRHSLPITDIHC
GLMGPQARVATASLDQTVKLWELSSGEMLLSVLFDVGIMSVTLDPCEYYLFCGGSDGGIF
QVSLCSQSLSRDKTFQSDNEGNQVFKGHRNLVTCLSVSMDGTLLLSGSHDETIRLWDIQS
KQSIRSINHKGPVTNALIIPAPANMFLPDSRPGIPLPRFSRHLNPSEQGEGVETGGVCLR
LAPHTQAQKETYLEKADKLYSVMSAVTDKSVFGDGENTKVRVSELEEEVRTLKKVNKDLY
DFSTQLLTKPS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcctatggaaatagttttgagtgccgattcggctggacagctatggaactgt
gccgttttggaactccattcgggtacaaatctcttggcctatcgaggtggcaatacttct
tcgaggtcactcacagttttgaatggagagtacatcctcggagcccaactcgggaaaaac
ttcatcaacgtgtgggaaatccagagaaaggatcagctgcagcagaaaattgtgtgccct
gggattgtgacatgcctgactgcatcccccaatggcctgtacttggtggcaggcattgct
gatgccatctacttatgggaggtttcctctgggaatttgctggccatcttgagccgccat
taccaagacctgacctgcctgcgcttcagtgacgacagcagccatttcatctcaggaggc
aaagacaacctggcactggtctggagtctagccagtgtggtgcagctggacccgtcacac
acccctgagcctcgtcatgtcctgtcccgtcactctctccccataaccgacatccactgt
ggcctgatgggaccccaggctcgagtagctactgcatccctggaccagacagtcaagcta
tgggagctatcctctggcgagatgctcctgtctgttctttttgacgtgggcatcatgtca
gtgacccttgacccctgcgagtactacctcttctgcggtggcagtgacggcggtatattt
caggtgtccctctgtagccagagcttaagtcgggataagacgttccagtcggacaacgag
ggcaaccaggtttttaaaggacacaggaacctagtgacatgtctgtctgtctctatggat
ggcactctcctcctctcgggctcccacgatgagaccatacgactgtgggacatccagagc
aagcagagcatccgcagcatcaaccacaaaggtccagtcacaaatgccctcatcatccct
gcccctgccaacatgttcctgcctgacagccgcccgggcatccccctgccacgcttcagc
cgccacctcaacccctcagaacagggcgagggcgtggagaccggaggagtgtgcctgcgc
ctggccccccacacccaggcccaaaaggagacctatttggagaaagcagacaaactctac
tccgtcatgagtgccgtaacagacaagagtgtgtttggtgatggtgagaacaccaaggtg
cgcgtgtcggagctggaggaggaagtgagaacgctgaagaaggttaacaaggacctgtac
gacttctccacacagctcctcaccaagcccagctag
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