KEGG   Salvelinus namaycush (lake trout): 120054675
Entry
120054675         CDS       T07522                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:snh03009]
    120054675 (wdr18)
Ribosome biogenesis [BR:snh03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    120054675 (wdr18)
SSDB
Motif
Pfam: WD40 WD40_alt WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_EML WDR55 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_VPS8 Ge1_WD40 WDR54
Other DBs
NCBI-GeneID: 120054675
NCBI-ProteinID: XP_038858133
UniProt: A0A8U1ELZ5
LinkDB
Position
Sna10:complement(11729912..11827577)
AA seq 431 aa
MSAPMEIVLSADSAGQLWNCAVLELHSGTNLLAYRGGNTSSRSLTVLNGEYILGAQLGKN
FINVWEIQRKDQLQQKIVCPGIVTCLTASPNGLYLVAGIADAIYLWEVSSGNLLAILSRH
YQDLTCLRFSDDSSHFISGGKDNLALVWSLASVVQLDPSHTPEPRHVLSRHSLPITDIHC
GLMGPQARVATASLDQTVKLWELSSGEMLLSVLFDVGIMSVTLDPCEYYLFCGGSDGGIF
QVSLCSQSLSRDKTFQSDNEGNQVFKGHRNLVTCLSVSMDGTLLLSGSHDETIRLWDIQS
KQSIRSINHKGPVTNALIIPAPANMFLPDSRPGIPLPRFSRHLNPSEQGEGVETGGVCLR
LAPHTQAQKETYLEKADKLYSVMSAVTDKSVFGDGENTKVRVSELEEEVRTLKKVNKDLY
DFSTQLLTKPS
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtccgcgcctatggaaatagttttgagtgccgattcggctggacagctatggaactgt
gccgttttggaactccattcgggtacaaatctcttggcctatcgaggtggcaatacttct
tcgaggtcactcacagttttgaatggagagtacatcctcggagcccaactcgggaaaaac
ttcatcaacgtgtgggaaatccagagaaaggatcagctgcagcagaaaattgtgtgccct
gggattgtgacatgcctgactgcatcccccaatggcctgtacttggtggcaggcattgct
gatgccatctacttatgggaggtttcctctgggaatttgctggccatcttgagccgccat
taccaagacctgacctgcctgcgcttcagtgacgacagcagccatttcatctcaggaggc
aaagacaacctggcactggtctggagtctagccagtgtggtgcagctggacccgtcacac
acccctgagcctcgtcatgtcctgtcccgtcactctctccccataaccgacatccactgt
ggcctgatgggaccccaggctcgagtagctactgcatccctggaccagacagtcaagcta
tgggagctatcctctggcgagatgctcctgtctgttctttttgacgtgggcatcatgtca
gtgacccttgacccctgcgagtactacctcttctgcggtggcagtgacggcggtatattt
caggtgtccctctgtagccagagcttaagtcgggataagacgttccagtcggacaacgag
ggcaaccaggtttttaaaggacacaggaacctagtgacatgtctgtctgtctctatggat
ggcactctcctcctctcgggctcccacgatgagaccatacgactgtgggacatccagagc
aagcagagcatccgcagcatcaaccacaaaggtccagtcacaaatgccctcatcatccct
gcccctgccaacatgttcctgcctgacagccgcccgggcatccccctgccacgcttcagc
cgccacctcaacccctcagaacagggcgagggcgtggagaccggaggagtgtgcctgcgc
ctggccccccacacccaggcccaaaaggagacctatttggagaaagcagacaaactctac
tccgtcatgagtgccgtaacagacaagagtgtgtttggtgatggtgagaacaccaaggtg
cgcgtgtcggagctggaggaggaagtgagaacgctgaagaaggttaacaaggacctgtac
gacttctccacacagctcctcaccaagcccagctag

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