KEGG   Salvelinus namaycush (lake trout): 120054679
Entry
120054679         CDS       T07522                                 
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like isoform X1
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03010  Ribosome
snh04120  Ubiquitin mediated proteolysis
snh04137  Mitophagy - animal
snh04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    120054679
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120054679
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120054679
   04137 Mitophagy - animal
    120054679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:snh03011]
    120054679
   04121 Ubiquitin system [BR:snh04121]
    120054679
Ribosome [BR:snh03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    120054679
  Archaea
    120054679
Ubiquitin system [BR:snh04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   120054679
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Ubiquitin_5 TBK1_ULD zf-C4pol UBL_UBAC1 Plexin_RBD OTU1_UBXL Dsc3_N
Other DBs
NCBI-GeneID: 120054679
NCBI-ProteinID: XP_038858140
UniProt: A0A8U1C135
LinkDB
Position
Sna10:11956967..11959647
AA seq 142 aa
MGQDCNKASSRPAKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA
GKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPR
AVNCRKKKCGHTSNLRPKKKLK
NT seq 429 nt   +upstreamnt  +downstreamnt
atgggacaagactgtaacaaggcaagcagccggcctgccaagatgcagatctttgtgaag
acgttgacggggaaaaccatcacccttgaggttgagcccagcgatactattgaaaatgtc
aaggccaagatccaggataaggaaggtattcctcctgaccagcagcgtctgatcttcgct
ggaaaacagcttgaagatggtcgcaccttgtcagactacaacatccagaaagagtccacc
ctgcatcttgtgctgcgtctgcgtggaggcatcattgagccatctctgagacagctggcc
cagaagtacaactgcgacaaaatgatctgccgcaagtgctacgctcgcctccatcctcgt
gctgttaactgccgcaagaagaagtgtggacacaccagcaacctgcgccccaagaagaag
ctgaagtaa

DBGET integrated database retrieval system