Salvelinus namaycush (lake trout): 120054716
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Entry
120054716 CDS
T07522
Name
(RefSeq) zinc finger RNA-binding protein-like
KO
K13203
zinc finger RNA-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120054716
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120054716
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
120054716
NCBI-ProteinID:
XP_038858194
UniProt:
A0A8U1BZB8
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All DBs
Position
Sna10:13683387..13703963
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AA seq
1029 aa
AA seq
DB search
MAASNYYGFTHGAGPQYSVQPPPAFAHPTTASYSVQPAPAVAHAVTASYAPAPAQAARPV
ASAPYLAAYQTHPAPPDYGYRQPDPTPQPTTTPQAYQLPVYTETDNYSYGRPPAVTSYET
KQYYQTSIAPAQRTPTEAYYQTGVKSGYSPVSTVYSQPPPPQRQVTALKPLAPASSVSTS
YNIYPVSTSVQQPPTPISSYTPCSSFNSTAATSYSGISYSTYDSSGYTSTPSYYQPAQLP
APQPPPQQPQPSMQLPHKQLTSSSWSNAGSNMVTAPTVNAYKKPMFHQNRLQKPKGPPKQ
PQLHYCDICKISCAGPQTYREHLEGQKHKKKEAALKSGSVVGSNGPRGIQTQLRCELCDV
ACTGVDAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPILVNNAPIISTSTAGKTTPIVVTS
AAPLAPPKPVVVNAVKAPAPVKKPITPKITLLANKPATPPSAKVDEDKQLATASKSETTS
DDEDGEGVGGQGDVQPVGHDYVEEVRNDDGKVIRFHCKLCECSFNDPNAKDMHLKGRRHR
LQYKKKVNPELPVEIKPSNRARKLQEGKLRKQKQKAVLKRQRDDEQRWHLEMRLEPDSSW
HTEMRRYEEDMYWRRMEEEQLYWGEQRRRMPPPPLMSRPGMPVPPLLQPVRRPDSPDDRH
IMAKHSTVYPVEEELQAVQRIVSHSERALKLVSDSLLEKEPPAAAPKTDTEADAGEKGPD
TQGTRMLKGVMRVGILAKGLLLHGDRNVELILLAAKKPTLSVLKDIAEQLPKELTTFSED
QYEVQAHPEEANIVIFSSKEPKMQVTISLTSPLMREDPAPEKEEKAGDKAAEKGVPEKDP
PDVLNRRKCLEYLAALRHAKWFQARANGLQSCVIIIRLLRDLCQRVPTWGKMPAWAMELL
VEKAISSATGPLSPGEAMRRVLECIATGILLPDGPGLLDPCEKAQTDALGSMTKQAREDI
TASAQHALRLLAFRQIHKVLGMDSLPASKASARNRKRRRDGSETGEGEGEGKKDKKEDAE
EVDAEEVDA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaagcaattattatgggttcactcacggtgccggtccgcagtacagcgttcag
cctccaccggcctttgcccaccccaccacagccagctacagtgttcagccggcccctgcc
gtggcccatgcagtgaccgcctcttatgcccctgcccctgcacaagcagccaggcccgtc
gcctctgcaccctacctggcggcctaccagacccaccctgcccccccagactatggctat
cggcagccggaccctacgccccaacctaccaccaccccacaggcgtaccagctaccggta
tacaccgaaacggataactacagttacggacgaccacctgcagtcactagttatgagact
aagcagtactaccagacaagtatagctccagcccagcggaccccaacagaagcttactac
cagacaggtgtgaagagtggctacagtccagtcagcacggtgtacagccagccccctcca
ccacagaggcaggtcacagctttaaagcctctggcccccgctagctcagtgtccaccagc
tataacatctacccagtgtccaccagtgttcagcagcctccaactcccatctcgtcttac
accccttgctcctccttcaactccacagctgcgacctcctactcgggcatcagctactct
acttatgactcgagtggctacacttccaccccctcctactaccagcctgcacagctgccc
gctccccagccgccaccccagcagccccagccgtccatgcagctgcctcacaaacagctc
accagctcctcctggagcaacgcgggtagcaacatggtgaccgctcccacagtcaacgcc
tacaagaagcccatgttccaccagaacaggctgcagaagcccaaagggccacccaagcag
ccccagctgcactactgtgacatctgcaagatcagttgtgctggcccgcagacgtaccgg
gaacacctcgagggccagaagcacaagaagaaggaggctgctctgaaatctggaagcgtg
gtggggagcaacgggccccgggggattcagacccaactgcgctgtgaactatgtgacgtt
gcctgcactggcgtagacgcgtacgctgcccatatccgaggggccaagcaccagaaggtg
gtgaagctccacaccaaactaggcaaacctataccgtcaactgaacccattttagtgaac
aatgctccgattatctcaacatcgaccgctgggaagacgacccctattgtcgtcacgtca
gctgcccctttagcgccacccaaaccggtggtggtaaacgccgtcaaggccccagcacct
gtgaagaagccaatcacacccaaaataacccttcttgccaacaagccggccacccctcca
tcagccaaggtggatgaggacaagcagttggcaaccgcttctaagagcgagaccacgagt
gacgatgaggatggggaaggagtgggggggcagggagacgtccagcctgtgggacatgac
tatgtggaggaggtgcgtaatgatgatgggaaggtgattcgcttccactgtaaactctgt
gaatgcagtttcaatgaccccaacgctaaagacatgcacctaaagggacgcaggcaccgg
ctgcagtacaagaagaaggtgaacccagagctgccggtggagatcaagcccagtaaccgg
gccaggaaactgcaggagggcaaacttaggaaacagaaacagaaggctgtgctgaagaga
cagagggatgatgagcagcgctggcacttggagatgaggttggagccagacagcagctgg
cacacagagatgaggcgctatgaggaggacatgtactggaggaggatggaggaggagcag
ctatactggggggagcagagacgcaggatgcccccccctccactcatgagccggcctggc
atgccagtgccacccctactgcagcctgtgcgtcggccggactccccagacgaccgccac
atcatggccaaacactccaccgtctaccctgtggaggaggagctgcaggcggtgcagagg
attgtgtcccactctgagcgagccctcaaactggtgtctgactccctgctggagaaagag
ccccccgctgctgctcctaagactgatacagaggctgatgctggcgagaaaggacctgac
acacaggggacccgtatgctgaagggggtgatgagggttggcattctggccaagggcctg
ctgctccacggggacaggaacgtggagctcatcctgctggctgccaagaagcccaccctc
tctgtactgaaagacatcgctgagcagttgcccaaagaactgacgacattttctgaagat
cagtatgaggtacaggctcaccctgaggaagccaacatcgtgattttttcgagcaaggag
ccaaaaatgcaggtcaccatctctctaacttcgccgctgatgagggaggaccctgcccct
gagaaggaggaaaaggcaggagacaaagcggctgagaaaggggtgcctgagaaagaccct
cctgatgttctgaaccgaaggaagtgcctggagtacctagctgctctgagacatgccaag
tggttccaggctcgtgccaacggtcttcagtcctgtgtgatcatcattcgactgttacgt
gatctgtgccagcgagtgccaacctggggcaagatgccagcctgggctatggagctgctg
gtagagaaggccatcagcagtgccacagggcccctcagcccaggggaagctatgcgtagg
gtcctggagtgtatcgccacgggcatcctactgccagacggtcctgggctgctggacccc
tgtgagaaagcccaaaccgatgctctggggagcatgaccaagcaagcccgggaagacatt
actgccagcgcgcagcatgctctgcgactgctggcgttccgtcagatccacaaggttctg
gggatggactccctgccggcgtccaaggccagcgctcggaaccgcaagcgcagacgggat
ggaagcgagacgggagaaggagagggggagggaaagaaagacaagaaggaggatgcagaa
gaggtggatgcagaagaggtggatgcttga
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