Salvelinus namaycush (lake trout): 120054755
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Entry
120054755 CDS
T07522
Name
(RefSeq) transcriptional repressor p66-alpha-like isoform X1
KO
K23194
transcriptional repressor p66
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120054755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120054755
03036 Chromosome and associated proteins [BR:
snh03036
]
120054755
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120054755
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
120054755
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
DUF7573
Zn_ribbon_8
FYVE
Motif
Other DBs
NCBI-GeneID:
120054755
NCBI-ProteinID:
XP_038858261
UniProt:
A0A8U1BJC1
LinkDB
All DBs
Position
10:15791613..15823128
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AA seq
667 aa
AA seq
DB search
MSEEAVRQTRSQKRALERDVVAPGSPGGELDIKKVKLENCEQPPAADSPIALVAVGGGDV
VKTEQAAKVASMSILKTDEVKATIKVEVQTGDGPVDMSTSKSDLKKERQPLSPNNDVIVL
SDNEPSSPVMNGLNHFRKTDTDLLMKSRPDERECIIKQLMEELRLQEAKLVLLKKLRQSQ
TQKESTVQKPTSGSVATPPPLVRGSMTSGKGVLQVSSVRSSGTVIPPPLVRGGQHVPSKQ
NSQTTMPPLVRGAQPIAVSPQQIASLRQQQQQHSGSGPPPLLLAPRASVPNVQVQGQRII
QQGLIRVANVPNTNVLVNIPQGSQKGSSVTSQAGMGSSVSTVQANESPAARQAAAKLALR
KQLEKTLLDIPPPKPPTPEFNFLPSAANNEFIYLVGLEEVVQNLLDTLGRGKQQGQSVAP
EIPVPEEPHTCAQCKTDFTSRWRSEKSGPVLCDHCMSSNLKKALKAEHTNRLKAAFVKAL
QQEQEIEQRILHQATSTVSKTPSSSGMKSEHQQHVLMSQQYKQARAHLQQQHRGTPVARH
HSSIKQSPGQLSRSVQQAVGSRGVSHSFPTSSQQLQNAVTAAALASRPGKHAMRPAQGTK
GISNNPSANPNAWRKQTTGNSGMTMAYVNPSLSVNKTTTSANLERQREYLLDMIPPRSIS
QTANTWK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggaggcggtgcgtcagacgcgcagccagaagcgggccctggagagggacgtg
gtggcccctggcagccccgggggtgagctggacattaagaaggtgaagctggagaactgt
gaacagccacctgcagcagacagccctatagctctagtggctgtggggggaggagatgtg
gtgaagacggagcaggcagccaaggtggccagcatgagcatcctgaagaccgacgaggtc
aaggctaccatcaaagtggaggtgcagaccggggacgggcctgtcgacatgagcacgtcc
aagagtgacttaaagaaagagaggcagcccctgtcaccaaacaatgacgtcatagtgctg
tcagacaacgagccgtccagccccgtcatgaacggcctgaaccatttcaggaagacagac
actgacctgctcatgaagagcaggccagatgagagggagtgcatcatcaaacagttgatg
gaggagctgagactacaggaggccaagctggtgctgctgaagaaactacgacagagccag
acacagaaggagagcactgtacagaagccaacctctggctctgtagccactcctccacct
ctggtcagaggcagcatgacatcaggcaaaggagtgctacaggtgtcgtcagtccgtagc
tcaggcacagtgatccctcctccattagtccggggtgggcagcatgtcccgtccaagcag
aactcccagaccaccatgccacccctggtcagaggggcgcagcccatcgcggtatctccc
cagcagatcgcgtccctgcggcagcagcagcagcagcactctgggtcgggcccccctccc
ctgctgctggcccccagagcctcggtccccaacgtccaggtgcagggccagaggatcatc
cagcagggcctcatcagggtagccaacgtcccaaacaccaacgtcctggtcaacatacca
cagggctctcagaagggctcgtccgtgacgtcccaggccgggatgggcagcagtgtgtcc
acggtccaggccaacgagtccccggctgctcgccaggcggctgccaagctggctctgcgt
aagcagctggagaagaccctgctggatatccctcctcccaaacctcccacccccgaattc
aacttcttgccatcagcagccaacaacgagttcatctacctggtgggcctggaggaggtg
gtgcagaacctgctggacacattgggacggggcaagcagcagggtcagtctgttgccccg
gagatccccgtccccgaggagccgcacacctgcgcccagtgcaagactgacttcacgtcg
cgctggcgctcggagaagagcggccccgtcctgtgcgaccactgcatgtcgtccaacctg
aagaaggccctgaaggcagagcacaccaaccggctgaaggcagccttcgtcaaggccctg
cagcaggagcaggagatagagcagcgcatcctccatcaggccacctccactgtctccaaa
acaccctcttcctctgggatgaagagcgagcaccagcagcatgtgctgatgtcacagcag
tacaagcaggccagagcccatcttcagcagcagcatagaggcacgcctgtggcccgccac
cactcctccatcaagcagagccctggtcaactgtcccgtagtgtgcagcaggcggtgggg
tctcgcggtgtcagtcactcgttccccacatcctctcagcagctgcagaacgctgtgacg
gcggccgcgctggccagcaggccaggtaagcatgccatgcgcccggcgcaggggacaaag
ggcatcagcaataacccctcggccaaccccaacgcctggaggaagcagaccaccgggaac
tcaggtatgaccatggcctatgtgaaccccagcctgtctgtcaacaagaccaccacctca
gccaacctggagcgccagagagagtacctcctggacatgatccccccccgctccatctcc
cagacagccaacacatggaaataa
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