Salvelinus namaycush (lake trout): 120054763
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Entry
120054763 CDS
T07522
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial-like
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
snh03029
]
120054763
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120054763
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
120054763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
Motif
Other DBs
NCBI-GeneID:
120054763
NCBI-ProteinID:
XP_038858275
UniProt:
A0A8U1C1A2
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All DBs
Position
Sna10:complement(16453251..16547181)
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AA seq
1336 aa
AA seq
DB search
MSLLRLCTFPKCLSGRILLEISVRRVPYADHCLTIRNNIERHISEPPWTSQRRHFSALIP
KKEDGKKRVWEQSQLLDVLEARIQQLQSDVIVDVQHEKVQFVKASKSGIRASSGNTPKNV
SGERTEVPKAGQTISKGGGQTGKGEGKDVSASKSRWMEKLSQEKKTKTKKLKQKLGLEDK
PVKSSKGKLMLPGTSHKTISTKAGIQTASTVKKSKTLKNQEHTVAASKHEHTMAAALVAN
PIRKAKGKGKALKEPTPELSEARNRAEELERKAEAKARELAEVEELERKLNQWAVSASPE
LVQDNSEARVYGDIQRSVRCYLEACVFCGDIDRAHRFLLGHHRMLSRRNLLNIGLYNIMM
RVWAKKGTLNQIGRMFILIEEAGLKPNLGSYCAALECMGRNPDCFPHVINRVLHQMEEDG
LPVDELFSHCVFRQDERDMVLRAIHTVQPDFQPTINTILQTCSSPLVKDFYTERADAKYP
KMAFSLEELRERFSRQLSMEQASTITIHSVEAMKPVTSHMAKMRDLLAVQRLVWHKALVG
ALRESKMILASSTQKAVRLSLYPYLCLLDEKDYVDIMIQSLSNLPPSGESLHILAKEIGN
RVHNMFCIRTKGHNQMVDKLSHIYNEYTELLAKDSKVFDVLPRERWWKLEAEHSSGPSLL
GDETHWPHMVVVELGTYLVDLMVKHMKVNSDILSSAYDRKLIPVLYHMYTFRSNKQVGFI
KPHPILTQMQQDAMDTTLTFDSYVMPMLCPPVPWTSSKFGAYLLTPTKMMRAVEGANQHE
ILLEKCQDADLHAVLDSLNQLGNAAWRINQPLLDIIISIFNDKGSEKLDVPPPNSEAPKI
PRYNQQDSATFTSAEKAHLKREVVNAKKKCSEMHSLRMDALYKLSIANHMRDEVFWFPHN
MDFRGRTYPCPPYFNHLGSDVTRAVLVFAEGKPLGPGGLEWLKIHLVNLTGLKKRSSLAG
RLEYANSIMDDILDSADNPLIGKKWWQNADEPWQTLACCMEIANAVRSPDPTHFISHFPV
HQDGSCNGLQHYAALGRDVIGATSVNLIPCEEPQDVYSGVAQQVEEFRARDAEKGLKVAQ
VLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIDDFPKEYVWDASHYLVHQVFSS
LKEMFTGTREIQDWLTESARLIAKSGSTVEWVTPLGLPIIQPYHRSRTQMLKATIQYLSL
QITHDSKERPDTVKQKNAFPPNFIHSLDSTHMMLTALYCYSAGLTFVSVHDCFWTHAITV
DTMNKVCREQFVALHSQPILQELSNFLLKKYCSGQLSEVKSKKFLEYRRMLLLLAKVPQT
GNFDLQRVKDSTYFFS
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttttgagactctgtacctttccaaagtgtctgagtggtcgcatactgttggaa
ataagtgttcgtcgtgtgccatatgccgaccattgccttacaatccggaataacattgaa
aggcacatttcagagccaccatggacatcacaacgaagacatttctcagctctgatccca
aagaaagaagatgggaaaaaacgagtatgggaacaatctcagctgctggatgtgctcgaa
gccaggatccagcaactccaatctgacgtcattgtagatgtccaacatgaaaaggtgcaa
tttgtcaaagcttccaagtcagggataagggcttcttcagggaacactcccaagaatgtg
tctggggagaggactgaggtgcccaaggcgggacagactattagtaagggagggggtcag
actggtaaaggagagggcaaagatgtctcagcctccaaatcccgctggatggagaaactg
agccaggagaagaagactaaaacaaagaaactgaagcagaagctaggactagaggataaa
cctgtgaaaagcagcaaaggcaaactgatgctaccaggtacctcacataaaaccatatcg
acaaaagcaggaatacagactgcatcaactgttaaaaagagcaaaactctgaaaaaccaa
gagcacaccgtggcagcttcaaagcacgagcacactatggcagctgcactggttgctaac
cctattagaaaagccaaagggaaggggaaagccttgaaggagccgactcctgagttgtcg
gaggccaggaacagggccgaggagctggagaggaaggctgaggccaaggcccgggagctg
gcagaggtggaggagctggagaggaagctgaaccagtgggctgtgtcggccagccctgag
ctcgtgcaggataacagcgaggccagggtgtacggcgacatccagcgcagtgtgcgctgc
tacctggaggcctgtgtgttctgtggggacatcgacagagcccaccgctttctgctcggc
caccaccgtatgctcagccgacgcaacctgctcaacataggactctacaacatcatgatg
agggtctgggccaagaagggcactttaaaccagattggccgtatgttcattctgatagaa
gaggctggtctgaagcctaaccttggctcttactgtgctgctctggagtgtatgggtcga
aaccctgactgtttcccacatgtcatcaacagggtcctgcatcagatggaggaggatggc
ctgcctgtggacgagctgttcagtcactgtgtgttcaggcaggacgagagggacatggtg
ctcagagccatccacaccgtgcaaccagacttccagcccaccatcaacactatcctgcaa
acctgctcctcaccactagtcaaagacttctacacagagagagcggatgctaaatacccc
aagatggccttcagcctggaggagctgcgggagaggttcagccgtcagctgagcatggag
caggccagcaccatcaccattcactctgtggaggccatgaagcccgtcacctcacacatg
gccaagatgcgggaccttctggcagtgcagcggttagtgtggcacaaagccctggttggg
gccctgagggagagcaagatgatcctggccagcagcacccagaaagccgtcagactcagc
ctctacccctacctctgtctgctggatgaaaaggactatgtagacatcatgatccagagt
ctgtccaacctgcctcccagtggggagtctctccacatcctggccaaggagataggcaac
cgggtccacaacatgttctgcatccgcacgaagggacacaatcagatggtggacaagctt
agccatatctacaatgaatatactgagctactggccaaagactctaaggtgtttgacgta
ttgcctagggagcgatggtggaagctggaggcggagcatagctctggtccctccctgctg
ggggacgagacccactggcctcacatggtggtggtggagctgggtacctacctggtggac
ctcatggtcaagcacatgaaagtgaacagcgacatcctcagctctgcctacgaccgaaag
ctcatccctgtgctctaccacatgtacaccttccgtagtaacaaacaggtcggcttcata
aagccgcaccccatcctgacgcagatgcagcaggacgccatggacaccacgctgaccttt
gactcctacgtgatgcccatgctgtgcccccccgtgccctggacctcgtctaaattcgga
gcttacctcctcacccctaccaaaatgatgcgtgcggtggaaggcgccaaccagcatgag
atcctgctggagaagtgccaggatgctgacctccatgccgtgctggactccctcaaccag
ttgggcaacgcggcctggaggatcaaccagcccctgctggacatcatcatctccatcttc
aatgacaagggtagcgagaagctggacgtcccgccgcccaactccgaggctcctaagatt
ccccgctacaaccagcaggactcggccaccttcacctcagccgagaaggcccacctgaag
agggaggtggttaatgccaagaagaagtgcagtgagatgcacagcctcaggatggacgcc
ctctataaactctccatcgccaaccacatgagggacgaggtcttctggttcccccacaac
atggacttccgtgggcgcacatacccgtgcccgccctacttcaaccacctaggcagcgat
gtgaccagggccgtcctggtgtttgcggaggggaagcccttagggccgggcgggctggaa
tggctgaagatccacctggtcaacctgacgggcctgaagaaacgcagctcgctggctggc
aggctggagtacgccaactccatcatggacgacatcctggactctgcagacaaccccctc
atcggtaagaagtggtggcagaatgcagatgaaccctggcaaaccctggcctgctgtatg
gagatagccaacgccgtcaggtcacctgaccccacacacttcatctcccactttcctgta
catcaggatggctcgtgtaacggcctgcagcactatgcagccctgggtcgagacgtgatt
ggtgccacctctgtgaaccttattccctgcgaggagccccaggatgtctacagcggggtg
gcacagcaggtggaagagttccgtgcgcgggatgcggagaagggtctgaaggtcgcccag
gtgctggagggcttcatcagcaggaaggtggtgaagcagacggtgatgacggtggtgtac
ggcgtgacgcgctacggaggacgcctccagatagagaagaggctcaaggagattgatgac
ttccccaaggagtatgtatgggatgcctctcactacctggtccaccaggtgttcagcagt
ctgaaggagatgttcaccggcactagagagatccaggactggctgacggagagcgccagg
ctcatcgctaagtcaggcagcacggtagagtgggtgacacccctgggccttcccatcatc
cagccttaccaccgcagccggacacagatgctgaaggccaccatccagtacctgagtctc
cagatcacccacgactctaaagagagaccagacactgtgaaacagaagaatgccttccct
cctaacttcatccactctctggactccacacacatgatgctgaccgctctctactgctac
agcgccggcctgacgttcgtctccgtccacgactgcttctggacccacgccatcacagtc
gacaccatgaacaaggtttgccgggagcagtttgtggcactgcacagccagcccattctt
caagagctgtccaacttcctactgaaaaaatactgctctgggcaactgagtgaggtcaaa
agcaaaaagtttctggagtaccgtagaatgctgctgctgctggccaaagtgccccaaaca
ggcaactttgatctccagcgggtaaaggattccacttacttcttcagctga
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