KEGG   Salvelinus namaycush (lake trout): 120054784
Entry
120054784         CDS       T07522                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120054784
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:snh01009]
    120054784
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:snh03021]
    120054784
Protein phosphatases and associated proteins [BR:snh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120054784
Transcription machinery [BR:snh03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     120054784
    Little elongation complex (LEC)
     120054784
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing Seryl_tRNA_N DUF6902
Other DBs
NCBI-GeneID: 120054784
NCBI-ProteinID: XP_038858332
UniProt: A0A8U1BSR1
LinkDB
Position
Sna10:complement(17638222..17687483)
AA seq 650 aa
MAALKEEQCYGLSCGRVSNGSNVSVFHVKLTDSALKAFEGYQSSKGLSSQPLIRFTGSQG
KISIPWSKNPNELRLFTFYLSNVGRDNPQGSFDCIQQYITSEGSIQLDCLGGIQDKITVC
ATDDSYQKARQSMAQAEEETRSRGAIVIKPGGRYVGKKVQIRKPAPGLSDIAPSRRTSRP
VIISSSAAKKSTAQQRPLRERLTHLLALKPYRKPELILRLQKDGLLPFDKDSLDSLLQQV
ANLNVRDNTFTLKDSLFKDIQKDWPGYTEGDQQLLKRILVRKMCQAQSQTPSTTTVAPPA
EVQLPVSPPKELASSSPSQKRPAADFIDPLANKKPRISHMANKTAVPINGKPSSSNGKEG
SGAVVAAPAVEGVTSSSQLPLLDIHRPFDPLSDVSNDSSHNGRDCEGQEAAVAERLSQPP
VFSGPAALSVPTLGLSSLGHTGLDGPQGKSTLPSLHGKSKKKSKKHKDKEKSKERERDRE
KERKGAEERVPEPRKACDITSSPENLKSSSIPHSSTDLNGMCNNTSVPSSSTEMADYLSE
YTVIGSSEQRQTYKNYFNTEYSEYRGLHARIEGITRQFTVLDTELKQLQQGTDKYKTIHN
QILQEYRKIKKTNPNYSQEKNRCEYLHSKLAHIKKLIAKYDQQQLQNWTG
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggcggcgttgaaggaggagcagtgctacggattgtcttgtggacgagtgagcaatggc
agtaatgtctccgtctttcacgtaaaactcactgacagcgccttgaaagcatttgaaggt
tatcagagcagcaagggcctgtcttcacaaccgctgatccgatttactggaagccaaggg
aaaatctcaataccgtggtcgaaaaatccgaatgagctgcgactgtttactttctacttg
tccaatgtgggtagggacaacccacaaggcagttttgactgcatccagcagtacatcacc
agtgaggggagcattcagctggactgcctgggtggaatccaggacaagatcacggtgtgt
gccacggacgactcttaccagaaggccaggcaaagcatggctcaggcagaggaggagacc
cgcagcaggggtgcgatcgtcatcaagcctggggggagatacgtgggtaagaaggtgcag
atccggaaaccggcacctgggctgtctgacatcgctccatcgcggcggacgtcgcggcct
gtcatcatctctagcagtgcggcaaagaagagcacggcgcagcagaggcccctgagggag
cgcctcacccacctgctggccctcaagccttacagaaagcctgagctcatcctgcgcctg
cagaaggatggcctcttgccctttgacaaggactctctggacagcctcctgcaacaggtg
gctaacctaaatgtgagagacaacaccttcacattgaaggactctttgttcaaggacatt
cagaaggattggccaggctacactgagggagaccagcaacttctgaagaggatccttgtt
cggaaaatgtgtcaggcccagagtcagactccgagcaccaccacagtggctcctccagct
gaggtccaactcccagtgagccctcccaaagagctggctagcagctccccgtcgcagaaa
cgacctgctgcagatttcatcgatcctctggccaacaaaaagcccaggatatcacacatg
gctaacaaaacagcggtgccaataaatggcaagccgagttcctccaatggaaaggagggg
agtggggcagtggttgcggcgccagcggttgaaggcgtgacgtccagctcccagctcccc
ctacttgacatccaccggcccttcgacccactctccgacgttagtaacgactccagccac
aatggccgggactgtgagggccaagaggccgctgtagctgagagactgagccagccacca
gtcttctctgggcctgcagcgctgtccgtaccaaccctgggcctctcgtccctcggacac
accggcctcgatgggccccagggcaagagcaccttgccctccctgcacggcaagtccaag
aagaagtccaaaaaacacaaagacaaggaaaagtccaaagagagggaacgggatagagag
aaggagaggaaaggagcagaggagcgtgttcctgagccaagaaaagcctgtgacatcacc
tccagccccgagaacctgaagagcagtagtattccacacagcagcacagatctcaatgga
atgtgcaacaacaccagtgttccttcgtcatcgactgagatggcagactatttatcggag
tataccgtgattggctcttccgagcagcgtcaaacatacaagaattactttaatactgag
tatagtgagtaccggggcctccacgctcggatagagggcatcacccggcagttcactgtg
ctcgacactgagcttaagcagctccaacaaggcacagacaagtacaagacaatccacaat
cagatactccaagagtatcgtaaaataaaaaagacgaatccaaactatagccaagagaag
aaccgctgtgaatatctacacagcaaactggcacatataaagaaacttatagcaaagtat
gatcaacagcaacttcaaaactggactggttga

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