Salvelinus namaycush (lake trout): 120054795
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Entry
120054795 CDS
T07522
Name
(RefSeq) AP-3 complex subunit delta-1-like isoform X1
KO
K12396
AP-3 complex subunit delta
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120054795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120054795
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Others
AP-3 complex
120054795
Endosome - Golgi transport
120054795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
HEAT
HEAT_2
INTS1_R4
PDS5
RTP1_C1
RasGEF_N_2
TOR1L1_N
Vac14_Fab1_bd
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
120054795
NCBI-ProteinID:
XP_038858350
UniProt:
A0A8U1C1E0
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Position
Sna10:complement(18665827..18697794)
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AA seq
1240 aa
AA seq
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MALKIVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISTCIDEIKQELKQDNIAVKANAVC
KLTYLQMLGYDVSWAAFNIVEVMSSSKFTYKRIGYLAASQCFHESTDVIMLTTNQIRKDL
SSPNQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
LDLLYGMVSKKNLMEIVKKLMLHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
ILVELTRLEGTRHGHLIASQMLDVAIRVKAIRAFAVAQMATLLDNAHLLTGNTQRNGICE
VLYAAAWICGEFSEHLEEPMATLEAMLRPKVATLPGHIQAVYVQNAAKLFATVLRGQEGA
PADSTVAQETSQLLIDRLPLFVQSSNLEVQERASCILQLVKYIQKLQQKDVEVAEEVTAL
FAGELNPVAPKAQKKVPVPEGLDLDVWINEPPSGSESEDEGRKSKGKAVFAKEESRHTKP
RYTEVDEKELAKRREVRKAEQANNPFYIKASPSSQKVYQDGVGVEHIPVVQIDLSVPLKV
PGMPMSDQYVKLEEERREKNKADKKKKDKKKREKGEKGRRRRGDSGPESEEDITPAHMVD
IVTEEMPENALPSDDDDKDPNDPHKALNIDLDKPLADSEKKLPVRSHRPDEVLKSPMEDR
QVVEVAPEPKKKTGKEKKEKDRKKSKEKKKKHKQEEDLMGAGSEEPVQPEETKEVAAPPP
ASTPEASDLDFWLSNAPVPSNPQAAAEAPPASTPRMASGMAAVAPDSEPEEAKDTEPEET
KSSKHKKKKKKQKKEKKKHHHDHSDGAGDESVQNGTVEEEEPLPPMSNYALLAENSYIKM
VCDIQGNLQDGSQVVVSVIFENKCDSFIKSMEFNVLDSLNSKLQRPDGAGPHDGLTVPFQ
LPPGISNEARFIFSVQNIVMPQKLKGTLTFIVKTDDSSTHEKLDFKLHFTCTSYLITTPC
YSDAYSKLLESGDLKGCSLKLEGVNQPFHHLLARICFHHHFSVVERIDSCASMYSRSIQG
HHMCLLVKTADQTVSIDAKCDEPGLLGNVLDEIKLTFFQC
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaagattgttaaagggagcatcgatcggatgttcgataaaaatcttcaagat
ttagtacgtggaattaggaatcacaaggaagatgaggctaagtacatctccacctgcatt
gatgagatcaagcaggagctcaagcaggacaacattgctgtcaaagccaatgctgtgtgc
aaactcacctacttacagatgctgggctatgatgtcagctgggctgcattcaacatcgtg
gaagtcatgagttcctccaaattcacatacaagagaattggttacctggctgcctcccag
tgctttcatgagagcactgatgtcatcatgctgacaaccaatcagatccgaaaggatctg
agtagtcctaaccagtacgacactggtgtggctctcactggcctctcctgcttcgtgacc
cctgacctggctcgggacctggccaatgacatcatgactcttatgtcccacacaaagccg
tacatcaggaagaaggcagtcctgattatgtacaaggtgttcctgaagtacccagagtct
ctgcgtcctgctttccccaggctgaaggagaaactggaagaccctgaccctggggtccag
tcagcggctgttaatgtcatctgtgagctggccaggagaaatcctaagaactacctgtct
cttgccccactcttcttcaagctcatgacctcctccaccaacaattgggtcctcatcaag
atcatcaagctgtttggtgccctcacacctctggagcctcgcttggggaagaagctgatt
gagcccctaacaaacctcatccacagtacctcggctatgtcacttctatatgaatgtgtc
aacactgtaatagcagtgttgatttccctgtcctctgggatgccaaatcacagtgctagt
attcagctctgtgtccagaaactgcgaatcctgattgaagactcggaccagaacttgaag
tacctgggcctgctggccatgtccaagatactgaagactcatcccaagtctgtccagtcc
cacaaggacctcatcctgcagtgtctggatgacaaggacgagtccatccgcctgagggct
ctagacctgctctacggcatggtgtccaagaagaacttgatggagatagtgaagaagctg
atgttgcacgtcgacaaggctgagggaaccacttaccgagatgagctgctcaccaagatc
atcgacatctgcagtcagagcaattaccagtacatcaccaactttgaatggtacatcagt
atcctggtggagctgacccgtctggagggcacgcggcatggccacctcattgcctcccag
atgctggacgtggccattcgggtcaaggccatccgagcctttgctgtggcccagatggct
actctactggacaacgcccacctgcttaccggcaacacacagcgcaacggcatctgtgag
gttctctatgccgccgcctggatctgtggagagttctcagaacacctggaggaacccatg
gcaactctggaggccatgctgcggcccaaggtggccaccctgccgggccacatccaggcc
gtgtacgtgcagaacgctgccaagctgtttgccacggtgttgcgtggccaggagggggca
ccagcggacagcacggtggcccaggagaccagtcagctgctcattgacaggctgcctctg
tttgtccagagttccaacctggaggtgcaggagagggcttcatgcatcctgcagctggtg
aagtacatccagaagctgcagcagaaggatgtggaggtagctgaggaggtgacagctctg
tttgctggggagctcaaccctgtggcccccaaggcacagaagaaagtacctgttcctgaa
ggtctggacctggatgtgtggatcaacgagcctccgtctgggagtgagtctgaagatgag
ggcaggaagtccaagggcaaggctgtgtttgccaaggaggagtccagacacaccaagcca
cgctacactgaggtggacgagaaggaactggccaagaggagagaagtaaggaaggcagag
caggccaacaacccattctacatcaaggcctccccctcctctcagaaggtgtaccaggat
ggtgttggtgtggagcacattccagtggtgcagattgacctcagtgtgcctcttaaggtc
ccagggatgccaatgtcagatcagtatgtgaagctggaagaggagcgtcgggagaaaaac
aaggcagacaagaagaagaaggacaagaagaagagggagaagggcgagaagggccgccgg
aggaggggggactctggcccagagagcgaggaggacatcacccccgcacacatggtggac
atcgtcactgaggagatgccagagaatgccttacccagtgatgacgacgacaaagatccc
aacgacccccacaaagctctgaacatcgacctggacaagcctctggcagacagcgagaag
aaactgccagtcaggtcacaccgtcccgacgaggtcctcaagagccccatggaagacagg
caggtggtggaggttgcaccagagcccaagaaaaagacaggaaaggagaagaaggagaag
gacaggaagaagagtaaagagaagaagaaaaaacacaaacaagaggaggatcttatgggt
gctgggtcagaggagcctgtccaaccagaagagaccaaggaggtggcagccccgcctcct
gcctctacaccagaggcttcggatctggatttctggctctcaaatgctccagtgccctct
aaccctcaggcagcagcagaagctccccctgcctccacccctaggatggcatctggtatg
gctgccgtggcaccagactctgagcctgaagaggccaaagacactgagccggaggagact
aaatcctccaagcacaagaagaagaagaagaagcagaaaaaggagaagaagaagcaccac
catgatcatagcgatggggccggagacgagtctgtgcagaacggtactgtggaggaggag
gagcctcttccgcccatgtccaattacgccctgctggctgagaactcctacatcaagatg
gtgtgtgacatccaggggaatctgcaggatggtagccaggtggtggtctctgtcatcttt
gagaataagtgcgacagctttatcaagtccatggagttcaacgtgctggactctctcaac
tccaagctgcagcggcctgatggagctggcccacacgacggcctcactgtgcccttccaa
ctgccccccggtatctcaaacgaggcacgcttcatcttctcagtgcagaacatcgtgatg
ccccagaaactgaagggaaccctcaccttcatagtcaagactgatgattcctccactcac
gagaaactggactttaaactgcactttacctgcacctcctacctgatcaccactccctgc
tacagtgatgcgtattctaagctgttggagtcaggggacctgaaggggtgctctctgaag
ctggagggagttaatcagcccttccaccatctactggccagaatctgcttccaccaccac
ttctctgttgtggagaggatcgattcctgtgcctccatgtacagcaggtcaatccagggt
caccatatgtgtctgctggtcaaaactgctgatcagaccgtgtccatcgacgctaaatgt
gacgagccagggctgcttgggaatgtgctggatgagatcaaactcaccttttttcagtgc
tga
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