Salvelinus namaycush (lake trout): 120054815
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Entry
120054815 CDS
T07522
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120054815 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_3
EGF_Teneurin
EGF_DL_JAG
JAG1-like_EGF2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
120054815
NCBI-ProteinID:
XP_038858389
UniProt:
A0A8U1BZL6
LinkDB
All DBs
Position
Sna10:19350109..19406047
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AA seq
2484 aa
AA seq
DB search
MGQLPGFASDKVLVFVVCCIRLSLALQCLDAVKPCVNNATCATFTNGTGYCRCAAGFLGE
YCHHKDPCHPGYCLNGGNCSVAVSGIPGSPTCSCPLGYTGQHCQTPQNSTCYPNNPCANR
GVCNLLSLDKYKCQCAHGWTGIRCERVDTCLPGPCANGGTCSSLSGGKFSCTCPAGYWGP
RCLNDTDECAASAPVCQNQGACVNTPGSYRCNCAPGFTGRHCETPYIPCTPSPCLNGGTC
RQTSETSYWCHCLPGFNGTNCDNNIDDCPNHHCQNGGTCMDGVNTYNCKCPPEWTGQSCT
EDVDECRLQPNTCQNGGTCSNIQGSYTCVCVNGWSGLDCSENIDDCATAACTKGSTCIDR
VASFLCVCPYGKTGLLCHVNDACISSPCRDGAQCDTNPINGMFNCNCAPGYKGSTCNDDI
NECIIGPNPCEHGGLCVNTDGSFTCNCARGYGGPRCETDINECVSSPCQNDGTCLDRIGD
YSCICMEGFEGTHCEIDINECASSPCLNQGICLDQVKRYICQCPLGFSGEMCQIDIDECS
STPCLNGAKCIDRPNGYECECAEGFYGPLCKENIDDCDPEPCHHGVCRDGIATFSCDCDP
GYTGSICNIQVMECHSNPCQNRGRCIDLVNKYQCNCLPGTSGVNCEINVDDCASNPCEYG
ECQDGINEYKCVCAPGYTGAKCDVDINECNSSPCMSGGTCVDKVNGFICQCPPGTHGPLC
HSGTDHCAPRPCVHGDCVEQQSGYHCECESGWVGQHCDQEKDECQSSPCQHSGSCVDRLN
GYSCQCRPGFTGVNCEVNIEECASSPCENHGTCVDGVNSYTCLCAAPYSGKHCEEELVPC
ASHPCERGGVCQPTPDYTFYTCRCPSGWQGPRCTEDVDECRKNPCQNSARCINSQGSYVC
KCQPGYSGLNCQTNIDDCSPNPCLNGGSCVDGVGGFSCDCRPGFDGERCEAEMDECASQP
CRNGAVCQDYVNSFVCECRPGFDGILCEHNIPECTESSCLNNGTCVDDINTFSCRCRPGF
YGTFCQYEQNECDSQPCKNGGTCTDGLGSYRCTCPVGYNGQNCQNFVNLCSQPLCRNGGS
CSQSQTTWSCHCPVGWTGLYCDVPNMSCQDYAARNGIPVEMVCKHMGCCVNVGNAHQCQC
QPGYTGSYCDKTVDECQSNPCRNGATCMDYQGTYECMCKAGYQGVNCEYDVDECHSNPCR
HGGTCINLINRFSCACPPGTHGVQCEVNMDDCAPKPGSWGPRCLNGGQCMDGVGRYTCSC
PPGFAGEHCEGDVNECLSGPCHSPGSLDCVQLVNDYQCRCRLGYTGRLCESMVDLCQSKP
CHNSGTCSMNMSSVHGYSCTCQPSFTGFNCGEVEGYNCAQLRCQNGGHCQDSQGGHLHCR
CQPGFSGSRCETVHSCQNRPCLNGGTCMKDPHNPYQYSCRCPAHFSGRHCENVIFDQSPR
TPSCPYVECEQRSGDKVCDPQCNNHECQWDGGDCSLHWRRPWVNCTASVPCWELFRNGRC
DHECDNSGCLFDSFECQESTKSYCKYDDYCADHYANKICDKSCNTEACGWDGLDCSEDTP
AKVVDGTLVIVVLLQPEELLGDVRGFLRSLGTLLHTNLRVKMDAQQKLMVYPYYGLEHDN
AIEGQSATMKRRGKRELDKEVIGSKVYLEIDNRECAESSMDCFSSTELAASFIAAEYLKS
ALPYPVVSVDSDHMDPQKPPFMLYLAVGAAVIILLILVLGVLAAKRKRKHGILWLPDGFL
AKKDDKRREPLGQDDFGMKNFKTQDGGMMDGGQRWMEEEAPPKKPRTEDKPLLPLGVDGG
VDRREWTLQHHKAADISLTPPQADLEADCLDVNVKGPDGFTPLMLASLRNGGASDCGLQA
EEEEESGGDEPGPNVISDLITQGATLIAQTDRTGETALHLAARYARADAAKRLLDAGADA
NAHDNMGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMVEEL
VHCHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSF
EAAQVLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGGGVG
HSRVCGGNGAGYMGMRPGPQGKKSRRGGGKVGGSGGGTAKELKDMKAKRRKKPTGGEGPA
VGAVGGANGNGTKAAGGLSESSVTMSPVDSLESPHSYTGDAAVASNTANSPPLLSSPSSR
PLLPPVSHMLGQQQSWLGLKHGYGGHMFSLLPQQMGNGHSGISQHHGQGLLTPMNVTMSR
EQLPPIVTFQMMAPGGGQALLKQPQPGQVQSQGQNQGQPRSQQGPTHLHCTQGMMYQMPG
VGLQHSLPHSHSLAHSHGMVHDGQSRQQLPPYQAIQSPVDKYPTPPSQHSYATAGSEGTT
PGHPAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPHALPPPRHTHIP
EQPQSQQTQQNPQQHQHGNMQVFV
NT seq
7455 nt
NT seq
+upstream
nt +downstream
nt
atgggccaattacccggttttgcttcggacaaagtattagtcttcgtcgtctgctgcatt
cggctttctttggctcttcagtgtctggatgctgttaagccgtgtgtgaacaatgctacg
tgtgccaccttcaccaacgggacagggtactgcaggtgtgccgcaggcttcctgggtgag
tactgccatcacaaagacccgtgtcatcctggttactgtctgaatggagggaactgctca
gtggctgtgtcgggcatcccgggcagccccacctgctcctgtcccctgggctacaccggg
cagcactgtcagactccccagaactccacctgctatcccaacaacccttgtgccaacaga
ggagtctgcaacctgctctccctcgacaagtacaagtgccagtgtgctcacggatggaca
ggcatacgatgtgagcgtgtggacacctgtctaccaggaccctgtgctaacggaggcacc
tgcagctctttgtccgggggcaagttcagctgtacctgtcctgcaggctactggggtccc
cgctgcctcaacgacactgacgagtgtgctgcctccgccccggtgtgtcagaaccaaggg
gcgtgtgtcaacacccccggctcctacagatgtaactgcgcccccgggttcaccggccgc
cactgtgagaccccctacatcccctgcaccccctcgccctgcctcaacgggggcacgtgt
cgccagacttctgagaccagctactggtgccactgcctgccaggtttcaatgggactaac
tgtgacaacaacattgacgactgccccaaccatcactgccaaaatggagggacctgcatg
gatggcgtcaatacctacaattgcaaatgtcccccggaatggactggtcagtcctgtaca
gaggatgtggatgagtgtcgcctgcagcccaacacgtgtcagaacggagggacctgcagc
aacatccagggcagctacacctgtgtgtgtgtcaacggctggagtggcctggactgctct
gagaacatagatgactgtgctacggctgcctgcaccaagggttccacctgtatcgaccgt
gtggcatccttcctctgtgtctgcccctatggaaagacaggtttgctgtgccacgtgaac
gatgcctgcattagtagcccgtgccgggacggggcgcagtgcgacaccaaccccatcaac
ggcatgttcaactgtaactgtgccccaggctacaagggaagcacctgcaatgacgacatc
aacgagtgcatcattggtccaaacccctgtgagcatggaggattgtgtgtgaacacggat
ggctcgttcacatgtaactgtgcgagaggttatggtgggccgcgctgtgagacagacatc
aatgagtgtgtctccagcccctgccagaacgacggcacctgtctggaccgcataggagac
tacagctgcatctgtatggaaggatttgagggaacacactgtgagattgacatcaacgag
tgtgctagctctccatgtctgaaccaagggatctgtctggatcaagtcaaacgctacatc
tgccagtgccctctaggattcagtggggagatgtgtcagatcgacattgacgagtgttcc
agcacgccctgcctcaacggggccaagtgtatcgaccgacccaacggatacgagtgtgaa
tgtgctgaaggcttctatgggccactgtgtaaggagaacatagatgactgtgacccggag
ccatgccaccatggtgtgtgtcgtgatggcatcgccacattctcctgtgactgcgacccg
ggctacaccggctccatatgtaacatccaggtcatggagtgccacagcaacccctgccag
aaccgcggacggtgcatcgacctagtcaacaagtaccagtgcaactgtctgcctggcacc
tcaggggtgaactgtgagatcaatgttgatgactgcgccagtaacccctgtgagtatggg
gagtgccaggatgggatcaatgagtacaagtgtgtctgtgctccagggtacacaggtgca
aaatgtgacgtggacatcaatgagtgtaattccagcccgtgtatgagtggtggcacatgt
gtagacaaggtgaacggcttcatctgccagtgcccccctggcacccacggccccctgtgc
cactctggcaccgaccactgtgccccccggccctgtgtacacggagactgtgtagagcag
cagagcgggtaccattgtgagtgtgagtctggctgggtggggcagcactgtgaccaggag
aaggatgagtgccagtccagcccctgccagcacagtggcagctgtgtggacagactcaac
ggatactcctgccagtgtcgccccggattcacaggtgtgaactgcgaggtcaacatagag
gagtgtgcatcaagcccgtgtgagaaccatggtacctgtgtggacggagtcaacagctac
acctgcctgtgtgccgctccgtactcaggaaaacactgtgaggaggagttggttccctgt
gcgtctcatccatgtgagcggggaggtgtgtgtcagccaaccccagactacaccttttac
acctgtagatgtcccagcggctggcaaggccctcgttgcactgaggatgtggatgagtgc
aggaagaacccgtgtcagaacagcgcccgttgcatcaacagccagggcagctacgtgtgc
aagtgtcagccaggctacagcggtctcaactgccagaccaacatcgatgactgctccccc
aacccgtgtctgaacggcggttcctgtgtggatggagtgggaggattctcctgtgactgc
cggccagggtttgatggggagcgctgtgaggcagagatggatgagtgtgccagtcaaccg
tgccggaacggagccgtgtgccaggactacgtcaacagcttcgtctgcgagtgccggcca
ggcttcgacggaatcctatgtgaacacaacatcccagaatgcactgagagttcctgtctg
aataacgggacctgtgttgacgacatcaacaccttctcgtgtcgttgtcgtcctggtttc
tacgggaccttctgtcagtatgagcagaatgagtgtgactctcagccctgtaagaacgga
gggacctgtacagacggcctagggtcctaccgttgcacctgccctgtaggctacaacggg
cagaactgccagaactttgtgaacttgtgtagccagccactgtgcaggaacggagggtcc
tgttcccagtcacagaccacctggtcatgtcactgtcctgtgggctggactggtctgtac
tgtgacgtccccaacatgtcctgtcaggactatgctgctcggaatggtattccagtggag
atggtgtgtaagcacatggggtgctgtgtgaacgtcggtaatgcccaccagtgtcagtgc
cagcctggctacacaggcagctactgtgacaagactgtggacgagtgccagtccaacccc
tgccgcaacggagccacctgcatggactaccagggcacatatgagtgtatgtgcaaggct
ggctaccagggggtgaactgtgagtatgacgtggatgagtgtcactctaacccttgtcgt
catggaggaacctgcatcaacctcatcaaccgcttctcctgcgcctgcccacctggtaca
catggtgttcagtgtgaggtgaacatggacgactgtgctcccaagcctggctcctggggg
cctcgctgtctgaacgggggccagtgtatggatggggtgggccgctacacctgctcctgc
ccccctggcttcgctggggagcactgtgagggggacgtcaatgagtgtctctctggaccc
tgtcactctcctggcagcctggactgtgtgcagctggtcaacgactaccagtgccgctgt
cgcctaggctacacaggacgcctctgtgagtccatggtggatctgtgccagtctaagccg
tgccataacagtggcacctgttccatgaacatgagctcagtgcatggatactcatgcacc
tgtcaaccaagtttcactggcttcaactgtggagaggtagagggctacaactgtgcccag
ctgcgttgtcagaacggtgggcactgccaggattctcagggtggtcatctgcactgccgt
tgccagccaggcttcagtgggtcgcgctgcgagaccgtccacagctgccagaaccggccc
tgtttgaatggaggcacctgtatgaaggacccacacaacccataccagtacagctgtcgc
tgcccagcccacttctcaggcaggcactgtgagaatgtcatcttcgaccagtccccccgc
accccctcctgcccttatgtagagtgtgagcagcggtccggggataaggtgtgtgacccg
cagtgcaacaaccatgagtgccagtgggacggaggggactgttctctacattggcgccgg
ccatgggtcaactgcaccgcctccgtgccctgctgggagctgttccgcaacggccgctgt
gaccacgagtgtgacaactctggctgcctcttcgacagctttgagtgtcaagagagcaca
aagtcctactgcaagtatgatgactactgtgcggaccactatgccaacaagatctgtgac
aagagctgtaacacagaggcatgtggctgggatggcctggactgctctgaggacacccct
gctaaggtggttgacggcacgctggtgatcgtagtattactgcagcctgaggagctgctg
ggagacgtgagaggcttcctgcgctccctgggaaccctgctgcacaccaacctccgtgtc
aagatggacgcccagcagaaactcatggtgtatccttactatggcctggagcacgacaac
gccattgaaggacagtctgctacaatgaaacgtagaggcaaacgggagctggacaaggag
gttatcgggtctaaggtttacctggagatcgataaccgagagtgtgctgagagctccatg
gactgtttctccagcacagagctggctgcatctttcatagctgcagagtacctgaagtct
gcgctgccctaccctgtggtctctgtcgacagtgaccatatggacccccagaagcccccc
ttcatgctgtacctggctgtgggagcagctgtcatcatcctgctcatcctggtgctgggt
gtgctggccgccaagaggaaacgcaaacacggcatcctctggctccccgatggcttcctg
gccaagaaagacgacaagaggagagagcccctgggccaggacgacttcggcatgaagaac
ttcaagacccaggatggagggatgatggacggaggccagagatggatggaagaggaggct
ccgcccaagaaaccaaggactgaggacaagcccctgctgccactgggtgtggatggagga
gtggaccgacgggagtggactttacaacaccacaaggctgctgacatctctctcactcca
ccacaggctgatctggaagcagactgccttgatgtcaatgtcaaaggaccagatggcttt
acccccctgatgctggcttctctacgaaacggaggggcgtctgattgcggcctgcaggca
gaggaggaagaggagagtgggggagatgagccaggacccaacgtcatctcagacctcatc
acccagggtgcaacactcatagcccagacagatcgcaccggtgagacggcactccacctg
gctgctcgctacgcccgggccgatgccgccaaaaggctgctggatgctggggcagatgcc
aatgctcacgacaacatgggtcgcacacctctccacgctgctgtggcagccgatgcccag
ggagtgttccagatcctgatccgtaaccgggccaccgagttggatgccaggatgaacgat
ggcaccacacctctgatcctggctgccaggctggctgtggagggcatggtggaggaactg
gtccactgccacgcggacatcaatgctgtcgacgaccacggtaagtctgccctgcactgg
gcagctgctgtgaacaatgtggaggccaccctagtgctgctgaagaatggagccaacaga
gacatgcaggacaacaaggaggagaccccattgttcctggcagccagagagggtagtttt
gaggcggcccaggttctgctggaccactactctaatagggacatcacagaccacctggac
cggctgccccgtgacaccgcacaggagcgcatgcaccacgacattgtacgtctgctcgat
cagtacaacctggtccacagccctcacaacggccccaaccacatgggcgggggagtggga
cactcccgggtctgtgggggcaacggagcgggctacatgggcatgcggcccgggccccag
ggcaagaagagcaggcggggaggggggaaggttggaggttcgggcgggggtacagccaaa
gagctgaaagacatgaaggctaagcggaggaagaagccaacaggaggagaagggcctgca
gtgggagctgttggaggagccaatggcaacggcactaaagctgcaggagggctgtcagag
agctcagtcaccatgtctcctgtggactccctggagtctccacactcgtacacaggagat
gctgccgtggcatccaacacggccaactctcctcctctcctgagcagcccctcctctagg
cccctgctgcctcccgtcagccacatgctgggccaacagcagagctggctgggtttgaag
catggatacggcggccacatgttcagcctcctcccccagcagatgggtaacggccattct
ggtatttcccagcaccacggccaaggcctgctcacccccatgaatgtcaccatgagccgc
gagcaactgcctcccatcgttaccttccagatgatggcaccggggggcgggcaagccctg
ctgaagcagccccagcctgggcaggtgcagtcacaggggcaaaaccagggccagccccgc
tctcagcagggccctactcacctgcactgcacccagggcatgatgtaccagatgcccggc
gtgggcctccagcacagcctcccccactctcacagcctggcccacagccacggcatggtg
catgatggccagtcccgccagcagctccctccatatcaggctatccagagccccgtggat
aagtaccccacccctccctctcagcacagctacgccaccgctggctcggagggcaccacc
ccggggcacccggctcacccgcccagtgagcacccgtacctcaccccctcccccgagtcc
cctgacccctggtcctcctcctccccccactccaactcagactggtctgacgtcaccacc
agccccacccccctggggaacccccatgcactgccgcctccccgccacacacatattcca
gagcagccacagtcccagcagacacaacagaacccccagcagcatcagcatggcaacatg
caggtgtttgtataa
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