Salvelinus namaycush (lake trout): 120054830
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Entry
120054830 CDS
T07522
Name
(RefSeq) nuclear factor 1 C-type-like isoform X1
KO
K09170
nuclear factor I/C
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120054830
Transcription factors [BR:
snh03000
]
Eukaryotic type
Other basic domains
NF-1
120054830
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Gene cluster
GFIT
Motif
Pfam:
CTF_NFI
NfI_DNAbd_pre-N
MH1
Motif
Other DBs
NCBI-GeneID:
120054830
NCBI-ProteinID:
XP_038858410
UniProt:
A0A8U1C1H0
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Position
Sna10:20195879..20305357
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AA seq
501 aa
AA seq
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MDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMTKEEERAVKDELLGEKPEVK
QKWASRLLAKLRKDIRPECREDFVLSITGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWR
LDLVMVILFKGIPLESTDGERLVKAGPCNNPILCVQPHHISVSVKELDLYLAYFVQERES
EQSSSPRTGIGSDQEDSRAATMDAPEFQESFVTSGVFNVTELVQVSRTPVVTGAGPNFSL
GELQGHLAYDLNPSGVGMRRTLPSTSSSGSKRHKSGSMEDDVDTSPGGEYYTSPNSPASS
SRTWQEDLEGGMSPGVKKTEMDSPSPQESSPRLGFTQHHRPVIAVHSGISRSPHPSSSLH
FPTTSILPQSTSYFPHTAIRYPPHLSSQDPLKDLVSLACDPSNQQPSPLNGSGQVKVPSH
YISSQMLAPPPPPGMPRLTLPSDSKSSTTTSDGGANSPTSPSKWAAAYSAPGTPPANRSF
VGIGPRDPGALYQAQSWYLGN
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtttcatccgttcatcgaggccctactgccgcatgtgcgtgcctttgcctac
acctggttcaacctgcaggcgcgcaaacgcaagtacttcaagaagcacgagaagaggatg
accaaggaggaagagcgggcagtgaaggacgagctgctgggagagaaacccgaggtcaag
cagaagtgggcatcgcggctgctggccaaactccgcaaggacatccggcccgagtgccgc
gaggactttgtgctgtccatcacggggaagaagcccccctgctgcgtcctttccaaccct
gaccagaagggcaagatgaggaggatcgactgcctgcgtcaggccgacaaggtgtggagg
ctggacctggtcatggtcatcctgttcaagggcatcccgctggagagcacggacggagag
cgcctggtcaaggctgggccatgcaacaaccccatcctctgtgtccagccacaccacatc
agcgtctcggtcaaggagttggacctctacctggcctacttcgtacaggagagagagtca
gagcagagcagtagcccacgcacaggtattgggtcagatcaggaggatagccgagctgcc
accatggatgctcctgagtttcaggaaagctttgtgacgtcaggagtttttaatgtaaca
gagctggtgcaagtgtccagaactccggtggtgacgggggcaggccctaacttttctctg
ggagagctgcaggggcacctggcctatgaccttaacccctcaggggtgggcatgaggaga
accctgcccagcacctcctccagcgggagtaagaggcacaagtcaggctccatggaggat
gatgtggacaccagtcctgggggggagtactacacctctcccaactccccggctagcagc
tcccgcacctggcaagaggatctggaaggaggcatgtcccctggagtaaagaagacagag
atggacagcccgtctcctcaggagagctccccacgtctcggcttcacacagcaccaccgg
cccgtcatcgcagtgcacagtgggatttctcggagtccgcacccctcctcgtctttgcac
ttccccaccacctccatcctgccccagtccacctcctacttcccccacaccgccatccgc
tacccgccacacctcagctcccaagacccgctgaaggacctggtctccctggcctgtgac
ccgtccaaccagcagcccagcccactgaacggcagtggtcaagtgaaggtgcccagtcac
tacatctcctcccagatgctggcgcctcctccgccccctggaatgcctcgactgacgctg
ccctccgactccaagtccagcaccaccacctcggacgggggagccaactcccccacgtca
cccagtaagtgggccgctgcatactcagctcctgggacgccccctgccaaccgctccttt
gtagggatcggacctcgagaccctggcgcactctaccaggcacagtcctggtacctgggg
aactaa
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