Salvelinus namaycush (lake trout): 120054865
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Entry
120054865 CDS
T07522
Name
(RefSeq) paired amphipathic helix protein Sin3b-like isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120054865
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120054865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
DUF768
MCP_V20_C
Motif
Other DBs
NCBI-GeneID:
120054865
NCBI-ProteinID:
XP_038858482
UniProt:
A0A8U1BT04
LinkDB
All DBs
Position
10:complement(23500237..23509618)
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AA seq
1222 aa
AA seq
DB search
MAKIQAHSNTKQINQIQDKAYVVQKQVQQQHFQKLKVEDALSYLDQVKIRFGNDPGIYNK
FLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGVVFLQSPF
SAQVSPGQGKSIASPAVSATGSSVAEAGSAQSEAVASPESISSSSGPPEPPSRLSLPLPS
RESQSQPQSSLVSPPASEPSPVEFDSAISYVNKIKNRFLDHPEIYRSFLEILHTYQVHCV
INMKEQLDVKESRGRSSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFTGSSL
TGKDQLKRAEDEDMSKHSKKRSRPMLLPHMTPLLKKKMKFSCSQDQSFASVGKHGVLREF
TFFDKVRRFFKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSFLGD
KELSHSMSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTAICKEVLND
TWVSFPSWSEDSTFASSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRL
SPEDQDRFRLDDCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKAKE
EEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESVYDERQEQ
STEEGGVGQQGRDGSSAAVVSEPHMVFTYEDKQILEDAASLIIYHVKRQPTIHKDDKDHI
KRIIQHFVPDLFFSRRGELSETEEWTDEEAEVEERGDRGGGGGSSSITGAVAAPVGQPQQ
HQQLNGESRRRRCTSPQTVELGGASSHSLAPEGGEKVDLRDPEAEHQKELDGVYNLFFVN
NNWYFFLRLHQTLCQRLLRVYRQAERQLLEHRAEQNRERLLMAEGRRDKASDLAMELRLK
QPSEVELEEYYPAFLDMVRSLLDGNLESTQYEDTLREMFTIHAYIGFTIDKLIQNTIRQL
QHLVSDEVCLQVAELYLAERKRGAAGGNLSSQCVRAAWETSYQWKSERVMAEENCFKVLF
IQNKGQVTLTIELLDTEEAQADDPLDVQCLSSYMEQFVGTESTLCSQTEGYFFKPVFLPR
NLRHFRRWQVRQVEAMRCRREWHRQLGVESAGSLDCRFKLNTHKMVFVMNSEDYMYRRGA
LVKARKSQHRVAVKQHERFDKWHQGWLAEHVPPAADRSVHDWLMGEEEEDMIPCKTTCLN
TQVKGLPVNRYQVHYSRKPPSP
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaattcaggcacacagcaacacgaagcaaataaaccaaattcaagacaaggcc
tatgttgtacaaaaacaagtgcaacaacagcactttcagaaactgaaggttgaagatgct
ctatcatacctggaccaagtgaaaatacgatttgggaatgaccctggaatatacaacaaa
tttcttgacataatgaaagaatttaaatcacaaagcattgacacaccaggtgttataaac
cgtgtgtctcagctcttccacggacacccggaccttgtcttgggattcaatgccttcctg
cccccaggctatcggatagagattcccaagaatggagtggttttccttcagtcacctttc
tctgcccaggtctccccaggccaggggaagagtattgcaagccctgctgtgagtgccact
ggctcatctgttgctgaagctgggtctgcccaaagtgaagctgtggcatcgcctgaaagc
atctcctcgtcctctggacccccagagccccccagtagactgtccttgccactccccagc
agagagagccagtcccagccacagtcctccttggtgtccccccctgcctcggagcccagc
ccagtagaatttgacagtgctatcagctatgtcaacaagatcaaaaaccgcttcttagac
catccagagatctacagatccttccttgagatactacacacttaccaggtacactgtgtc
atcaatatgaaggagcagcttgatgtcaaggagagccggggtcgtagtagtagtgggatg
acagaggatgaagttttctcaaaagtggccagcctcttcaaaggccaagaggacttactg
gctgagtttggacagttcttaccagatgctaagagatcattgttcactggcagctccctg
acagggaaagaccaactgaagagggcagaggatgaggatatgagcaaacatagcaagaag
agatcaaggcccatgctgctgccgcacatgacgccactgctcaagaaaaagatgaagttt
tcgtgctcccaagaccagtcctttgcctcagttgggaagcatggagtcttgcgggagttc
accttttttgacaaggtccgacgtttcttcaagagccaggaggtgtatgaaaacttcctc
cgctgcattgctttgtttaaccaggaagtggtttcgggagcagagctgctgcagcttgtc
accccctttttggggaagtttccagagctatatacccagttcaagtcatttctgggggac
aaagagctctctcattcaatgtctggcctgtcagaccgctacatggaagggggtgggggc
agggaggttgactatgcatcttgcaagcgcctgggatctagctacagagcactacccaag
acttaccagcagcccaagtgcagcggtcgcactgccatctgcaaagaggtgttgaatgac
acctgggtttccttcccctcgtggtcagaggactctacgtttgcaagctctaagaaaacc
ccatacgaggagcagcttcatcgctgtgaggatgagaggtttgaattggatgtggtcctg
gagacaaacctagccaccatccgggtcctggagagtgttcagaagaagctgtcccgtctg
tcgcccgaggaccaggaccgcttccgtctggacgactgtctgggtggcacctctgaggtc
atccagcgccgagccgtctaccgtatctatggcgataaggcccctgagattatagagggt
ctgaagaggagtcctgctactgctgtgcctgtggtgctcaagagattgaaagcaaaggag
gaggagtggagagaagcccagcagggctttaacaagatctggagggagcagtatgagaag
gcctacctcaagtccctggaccaccagggggtcaacttcaagcagaatgacatgaaggcc
ctccgatccaagagcctgctcaatgagattgaaagtgtttatgatgagcgtcaggagcag
agcacagaggaggggggcgtgggccagcaggggcgtgatgggagcagtgcggcagtggtc
agcgagccacacatggtgttcacctatgaggacaagcagatcctggaggatgctgcctcc
ctcatcatctaccacgtcaaacgccagcccaccatccacaaggatgacaaggaccatatc
aagcgtatcatccagcactttgtccctgacctattcttctcccgccgcggcgagctcagc
gagacggaggagtggacggacgaggaggccgaggtggaggaacgaggagaccgaggaggt
ggtggtggtagcagcagcataacaggagcagtggcagcacccgttggccagccgcagcaa
caccagcaactgaacggggagtcgaggcggcggcgctgcacctctcctcagacagtggag
ctgggtggagcctcctctcacagcctggccccagaaggaggggagaaggttgacctgaga
gaccccgaggcagagcaccagaaggagctggacggagtctacaacctattctttgtcaac
aacaactggtacttcttcctgcggctgcaccagaccctgtgccagcggctgctgagggtg
taccggcaggcagaacggcagctgctggagcaccgggccgagcagaaccgtgaaaggctg
ctgatggcagagggccgcagggataaggccagcgacctggccatggagctccgcctcaaa
cagccaagtgaggtggaactggaggagtactacccagcgtttttggacatggtgcgcagt
cttctggatgggaacctggagtctacgcagtatgaggacacactgcgggagatgttcacc
atccacgcctacatcggcttcaccatcgacaagctcatccagaataccattagacagctg
cagcacctggtgagtgacgaggtgtgcctacaggtggctgagctgtacctggctgagagg
aagaggggtgcagcgggggggaacctgtcgtcccagtgtgtgagagcagcctgggagacc
agctaccagtggaagtctgagagggtcatggctgaggagaactgcttcaaggtgttgttc
attcagaacaaaggccaggtcaccttgaccattgagctgctggacacagaggaggcccag
gccgatgatcccctggatgtgcagtgcctgtccagctatatggaacagtttgtagggaca
gagtcgacgctttgctcgcagactgaaggctactttttcaaacctgtatttttgcccagg
aacctgaggcacttcagacgctggcaggtgcggcaggtggaggcgatgcgctgcagacgg
gagtggcacaggcagctgggagtggagagtgctggcagtctggactgccgctttaaactc
aacacccacaagatggtgttcgtcatgaactctgaggactacatgtaccgccggggagcg
ctggtcaaagccaggaagtcccagcacagggtggctgtgaaacagcacgagcgctttgac
aagtggcaccagggctggctggcagagcacgtgcctccggcagccgatcgctcggtccac
gactggctgatgggtgaggaagaagaagacatgatcccctgcaagaccacctgcctcaac
acacaggtcaaaggcctgcctgtcaacagataccaggtgcattacagtaggaaacccccc
tctccctag
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