Salvelinus namaycush (lake trout): 120054869
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Entry
120054869 CDS
T07522
Name
(RefSeq) replication factor C subunit 4-like isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03030
DNA replication
snh03410
Base excision repair
snh03420
Nucleotide excision repair
snh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120054869
03410 Base excision repair
120054869
03420 Nucleotide excision repair
120054869
03430 Mismatch repair
120054869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snh03032
]
120054869
03036 Chromosome and associated proteins [BR:
snh03036
]
120054869
03400 DNA repair and recombination proteins [BR:
snh03400
]
120054869
DNA replication proteins [BR:
snh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120054869
DNA Replication Termination Factors
ELG1-RFC complex
120054869
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120054869
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120054869
Check point factors
HRAD17(Rad24)-RFC complex
120054869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
AAA_16
AAA_assoc_2
AAA_22
AAA_30
AAA_11
Mg_chelatase
SLFN-g3_helicase
DUF815
RuvB_N
AAA_28
Gp44_lid
AAA_14
AAA_5
AAA_24
AAA_19
Cdc6_lid
RPA_interact_N
ResIII
Kinesin
AAA_7
ATPase_2
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
120054869
NCBI-ProteinID:
XP_038858490
UniProt:
A0A8U1BQ55
LinkDB
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Position
10:complement(23533199..23540255)
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGTSTQGTRPLKEKGTGTSGEKKQKSVPWVEKYRPKCMEEVAFQEEVVAVLKKTI
EGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKRF
AQLTVAGHRTDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYVSRI
IEPLTSRCSKFRFKPLANQVQEERLLDICDKENLKYSKEGIAALVKVSEGDLRKAITFLQ
SAARLNTDNEITENAVIEIAGVVPPKMIDNLLKICFKGTFEKLEIAVRNMVDEGYAATQI
INQLHEAIIEEELNDKQKSAITEKMAVVDKCLVDGADEYLQMLSMCSVIMQQATLSN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggaacatcaactcaaggcaccagacctctgaaagagaaaggt
acagggaccagtggagagaagaagcagaaatctgtcccctgggtagagaaatatagacca
aaatgtatggaagaggtggcgtttcaagaggaggtggttgctgtgctgaagaagactata
gagggcgctgatctccccaatctgctgttctatggaccacctggaacaggaaagacctcc
accatcctggctgcagccagggaactttatgggccagagctgtaccgacagagagtgctg
gagctgaatgcctccgatgagagagggattcaggtggtgagagagaaagtcaagagattt
gcccagctgactgtagcaggccaccgcactgatgggaaaccatgcccaccctttaagatc
atcatcctggatgaggctgactcaatgaccaatgctgctcaggctgctctcagacgcacc
atggagaaggagtcccggaccacccgcttctgtctcatctgcaactacgtcagcaggatt
attgagcccctgacatccagatgctccaaattccgcttcaaacctctagcaaatcaggtc
caagaagagcgcctgctggatatctgtgacaaggagaatctcaagtactcaaaggagggt
attgcagcgttggtgaaggtttcagaaggggatcttagaaaagccataacctttcttcaa
agtgctgcacggctgaacacagataatgagatcacagagaatgcggtcatagagatagca
ggggttgttcctcccaagatgattgacaatttgctcaaaatctgtttcaagggaacattt
gaaaaactagagattgctgttcggaacatggtagatgagggctatgctgccacacaaatc
atcaaccagctacacgaagccatcatagaggaagagctgaatgacaagcagaagtctgcc
atcacggaaaagatggcagtggttgacaagtgtttagtggatggtgcagatgagtacctg
cagatgctgagtatgtgttctgtgatcatgcagcaagctactctgagtaactga
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integrated database retrieval system
