Salvelinus namaycush (lake trout): 120054888
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Entry
120054888 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120054888
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120054888
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120054888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_5
zf-RING_2
TRAF3_RING
Cas12f1-like_TNB
Prok-RING_4
DUF1232
Motif
Other DBs
NCBI-GeneID:
120054888
NCBI-ProteinID:
XP_038858530
UniProt:
A0A8U1C1M5
LinkDB
All DBs
Position
Sna10:25312958..25321860
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AA seq
245 aa
AA seq
DB search
MNQTMHTSHSSHPRCDPLPEVTVGQGHLGSSSEHTQDRTSLKHVTYSKNSSQICPSAGHR
DWLCPVCLHTASFPVQTNCGHLFCAPCLISYWRHGSWLDAISCPLCRQKVKVLCRLFSKG
CSDSKEREVLGEITDYNKRYSGAPRKVTDYLCDTPLFLQLLIRRLGTMGGLVCLFFLRVA
LCCLGTVVSLASPPLDAPPSLPGLLGVLDDLVVVFLLLICVININQQMAPDSGNSSAHTG
GRPVQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaccatgcacacctcacacagctctcatcccagatgtgaccctctgcctgag
gtcacagtgggtcagggtcacctaggatcgtcctcagaacacacacaggatcgaacatcc
ctcaaacatgtgacctacagcaagaactcctctcagatctgtccatccgcgggccacaga
gactggctctgccctgtatgtctacatactgccagcttccccgtacagaccaactgtggc
catctcttctgtgctccctgtctgatctcctactggagacatgggtcctggctggacgcc
ataagctgccctctgtgtagacaaaaggtcaaggtcctgtgtcgtctgttcagtaagggt
tgttcagacagtaaagagagggaggttctgggagaaatcacagactacaacaaacgctac
tcaggagcccctcgaaaggtgacagactacctgtgtgacacgcccctgttcctgcagctg
ctaatccgccgcctgggcaccatgggggggctagtgtgcctcttcttcctccgggtggca
ctttgctgtctggggactgtggtgtccctcgcctcacctcctctggacgctccaccctcc
ctgcctggcctcctgggggtcctggatgacctggtggtggttttcctgctgctcatctgt
gttatcaatatcaaccagcagatggcaccagatagtgggaactcctcagcgcacacaggg
ggtaggcctgttcagtaa
DBGET
integrated database retrieval system
