Salvelinus namaycush (lake trout): 120054899
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Entry
120054899 CDS
T07522
Symbol
sv2ca
Name
(RefSeq) synaptic vesicle glycoprotein 2Ca isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120054899 (sv2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120054899 (sv2ca)
Transporters [BR:
snh02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
120054899 (sv2ca)
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
MFS_2
Pentapeptide_3
Pentapeptide_4
Motif
Other DBs
NCBI-GeneID:
120054899
NCBI-ProteinID:
XP_038858550
UniProt:
A0A8U1BKS7
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Position
Sna1:30532999..30553858
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AA seq
737 aa
AA seq
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MDDSNENRTSLVKGAKDIAKEAKRHAVKKVNKVMDSTTDEYSQRKYSRFEDEVDEGDDFY
RNPPRQDGGYNDNDQASDASDATEGHDDEDEIYEGEYQGIPAAGDRRAREGQVALGQPVT
DSLKDRKELEQERQADEEELAQQYELIIQECGHGRFQWQLFLVLGLALMSDGVEVFVVGF
VLPSAETDMCALGGSNSRSGWLGSIVYLGMMVGAFFWGGMSDKVGRRQCLLICMCVNGFF
AFLSSFVQGYGIFLFCRMIAGFGTGGVVPIVFSLFAEVLSREKRGEHLSWLCMFWMIGEI
YASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPESPRFYLEVG
KHDEAWMILKQIHDTNMRARGQPEKVFTVNRIKIPKHLDELVEMKSESGNPVSKALFRSK
TELCGIWVNFMKCFDYPLKESTIKLAIVWFTLSFGYYGLSVWFPDVIKHLQADDYASKVK
IHSNERIEDFTFNFTMENQIHTNGVFINDRFVNMKLKSITFIDSTFRNCYFDDVTSVGSY
FRNCTFIEPFFYNTDIDDSKLIDGTEVINSTFHHNKTGCQMTFDDDYSAYWVYFINFLGT
LAVLPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLSISA
WNSLDVVTTESFPTDRRGTGFGFCNALCKLAAVLGNLIFGSLVGITKSIPILLASSVLVC
GGLVGLRLPDTRANVLM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagcaacgaaaacaggacttccttagtgaagggggccaaggacatcgccaag
gaggccaagcggcacgctgtgaaaaaggtcaacaaggtcatggacagcaccacagacgag
tactcccagcgcaaatacagccgtttcgaggacgaggtggacgagggggacgacttttac
cgtaaccctcccaggcaggacggaggctacaatgacaacgaccaggccagtgatgccagc
gacgccacagagggccatgatgacgaagatgagatctacgaaggggagtaccagggaatc
ccagcggccggagacaggcgggccagggaggggcaggtggctctggggcagcccgtcaca
gacagcctgaaagaccgtaaggagctggagcaggagaggcaggcggacgaggaggaactc
gcccagcagtatgagctgatcatccaggagtgtggccacggcaggttccagtggcagctg
ttcctggtgctgggcctggccctcatgtcagatggggtggaggtgttcgtggtggggttt
gttctacccagcgccgagacggacatgtgtgctctgggtggctccaactccagatctgga
tggctaggcagtattgtgtacctggggatgatggtgggggcgttcttctgggggggcatg
tcggacaaggtgggccgcagacagtgtctgctcatctgcatgtgtgtgaacggcttcttc
gccttcctgtcctccttcgttcagggttacggcatcttcctgttctgccgcatgatcgca
ggctttggaacagggggggttgtacccatcgtcttctccttatttgcggaggtgctgtcc
agagagaagagaggggagcacctgagctggctctgcatgttctggatgattggcgagatc
tatgcttcagccatggcctgggccattataccacactacggctggagtttcagtatgggt
tctgcctaccagttccacagttggagagtgtttgtggtcgtctgcgccctgccctgcgtt
tgtgctgtcgtggctctcactttcatgcccgagagccccaggttttacctggaggtgggg
aagcacgacgaggcttggatgatcctcaagcagatccatgacaccaacatgcgagcgcgt
gggcagccggagaaagtcttcaccgtgaacagaatcaagatccccaagcatttggatgag
ctggtggagatgaaatcagagtcggggaacccagtctccaaggccctcttcaggtccaag
acagagctatgtgggatctgggttaactttatgaagtgtttcgactaccctctgaaagaa
agcactatcaagctagctattgtttggtttacgctgtcatttgggtactacggcctgtct
gtgtggttccctgacgtcatcaagcacctccaggcagatgactacgcctccaaggtgaag
atccacagcaacgaacgcatcgaggacttcaccttcaatttcaccatggagaaccagatc
cacaccaatggtgtcttcatcaacgacagatttgttaatatgaagttgaagtccatcacc
ttcattgactcaaccttccgtaactgctactttgacgacgtgacgtcggtgggatcctac
ttccggaactgtaccttcatcgagccgttcttctacaacactgacatcgatgactccaaa
ctgatagatggcacagaggtgatcaacagcacgtttcaccacaacaagacgggctgtcag
atgacatttgacgacgactacagcgcctactgggtctacttcatcaatttccttggaact
ctggctgttctgcccggcaacatcgtctcggcactgctcatggataaaatcggacgcctt
tccatgttaggtggctccatggttctgtcagggatcagttgtttcttcctgtggttcggc
accagtgagtcgatgatgatcttcatgctgtgcctttacaacggcctgagcatatcagcc
tggaactcactggacgtggtcaccacagagtccttccctacagatagaagagggacaggt
tttgggttctgtaacgccttgtgtaagctggctgcagtgttgggaaacctgatctttggt
tctctggttggcatcaccaagtccatccccatcctcctggcctcatctgtgctggtgtgt
ggaggcctggtggggctccggctgcctgataccagggccaacgtactcatgtag
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