Salvelinus namaycush (lake trout): 120054907
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Entry
120054907 CDS
T07522
Name
(RefSeq) F-box/LRR-repeat protein 5 isoform X1
KO
K10271
F-box and leucine-rich repeat protein 5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120054907
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120054907
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
LRR_4
Hemerythrin
LRR_6
F-box
LRR_At1g61320_AtMIF1
LRR_At5g56370
LYRM_2
F-box_4
DUF6238
Motif
Other DBs
NCBI-GeneID:
120054907
NCBI-ProteinID:
XP_038858561
UniProt:
A0A8U1BJU9
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Position
Sna10:complement(27070478..27085534)
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AA seq
683 aa
AA seq
DB search
MAPFPDEVDVFTGPHWRMKQLVGLYCEKLSQTNFSNNNDFRSFLQSLCATFKEFKMHEQI
ENEYIIGLLQQRSCNVYNVHSDNKLSEMLSLFEKGLRSVKSENEQLNYAQQLKERLEAFT
QDFLPHMKEEEEVFQPMLMQYFTYEELKDIKKQVIAQHSSQQRWDCAAEVLKGLSLWSQA
EELHKAFKYADHEKTDDELEKELCSTHISQLPTEILLHLFRYLGPEDLCHCGQVCSAWSD
LAKTGSLWRHLYPVRWARGDYYRGPPDELNQEPDEEWVKSLQDEGKAYQEWDEDADVDES
DASCEDSLAISAAQREKKLLNGMIQNLLPAVGSSVRSIVLAYSSTVSSKMVRQILSLCPN
LTHLDLTQTDVTDSAFDSWSSLWACLSLEHLDLSGCEKITDRTLKKLSLGLGDLASPTCS
DRRAKLLKSPPSPISLLDKRSRQVLIFKQWPGRLGSAPCSPTRVWVLDPSELADIEDAAE
WNRRRGVSTPKVRGFVETQPGGLSCCCRRGGFRTGFSTSYWQQQYGLGEAGCGHSTCCTG
EMALRTLGGLQYKSYTTRGSAGAEFRTKCSSGGQLCLECDNRTDQSDGRRSLRFLSLSGC
YQVTDLGLRALSQRGGLPHLEHLNLSGCLLVTEVGLQELVSACPALNDEHFYYCDNINGP
HADTASGCQNLQCGFRVCCRSGE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggctccttttcccgacgaggtggatgttttcactggcccacactggcgaatgaaacag
ttggtgggactttactgtgagaagctgtcacagaccaacttctccaacaacaatgacttc
cgctcatttcttcagtcgctgtgtgctaccttcaaggagttcaagatgcatgaacagatt
gagaatgagtacatcatcggcctgttgcagcagcgcagctgcaatgtgtataatgtacac
tccgacaacaagctctcagagatgttgtccctgtttgagaaagggctgagaagcgttaag
agtgagaatgagcagctcaactatgcccagcagctgaaggaaagacttgaggcattcaca
caggacttcttaccccatatgaaggaggaggaagaggtgttccagcccatgctgatgcag
tacttcacttatgaggagctgaaagacatcaagaagcaggtgatagcgcagcacagtagc
cagcagcgatgggactgtgcagcagaggtgctgaaggggctcagtctgtggagccaggca
gaggagctgcacaaggccttcaagtatgctgaccatgagaagactgatgatgaattggag
aaagagctgtgctccacccacatctcccagctgcccacagagatcctgctgcatctgttc
cgctatctgggccctgaggacctgtgtcactgtggccaggtgtgctctgcctggtctgac
ctggccaagaccggctctctgtggagacacctctaccctgtacgctgggccagaggggat
tactatcgcggtcccccagatgaactgaaccaggagccggatgaggagtgggtgaaaagt
ctgcaggatgagggcaaggcctaccaggagtgggatgaggacgcagatgtggatgagtct
gatgcatcttgtgaagactccttggctataagcgctgctcagagggagaagaagctcctg
aatggaatgatccagaaccttctgccagctgtgggttcctctgtcaggtccatcgttctg
gcctacagctctacggtctccagtaagatggtgcgtcagatcctcagtctctgtcctaat
ctcacccacctggacctcactcagactgatgtcacagactccgcctttgacagttggtca
tctctgtgggcatgtctctctctggagcacctggacctttcaggctgtgagaagatcact
gaccgcacactgaagaagctgtccctgggtcttggagacctggcatctcccacctgctct
gaccgacgagccaagcttctgaagagccctccttctcccatcagtctgctggacaagcgc
agccggcaggtcctgatcttcaagcagtggccagggagactgggcagtgccccctgcagc
cccaccagggtctgggtcctggacccctcggagctggctgacatcgaggacgctgcagag
tggaaccggcgcaggggagtgtctacccctaaggtgcggggctttgtggagactcagcca
ggggggttgtcgtgttgctgtaggagggggggcttcaggactggctttagcacctcctac
tggcagcagcagtatgggcttggggaggctggctgtggccattcaacctgctgcactggt
gagatggccctgaggactttaggagggctgcagtataagtcttacaccaccaggggcagt
gcaggggcagagtttcggactaaatgctcctctgggggccagttgtgcctggagtgtgac
aacagaactgatcagtcagacggtcggcgctcactaaggttcctcagcctgtctggatgc
tatcaggtcacagacctgggcttgagggcactgtctcagcgtggagggcttcctcacctg
gagcatctgaacctgtctggatgtctcctcgtcactgaggtggggctacaggagctggtg
tcagcctgtcctgccctcaatgatgaacacttctactactgcgacaacatcaacggtccc
cacgctgacacggccagcggctgccagaacctgcagtgtggcttcagggtgtgctgccgc
tctggagagtga
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