Salvelinus namaycush (lake trout): 120054924
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Entry
120054924 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: mast/stem cell growth factor receptor Kit-like
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120054924
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
120054924
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
snh01001
]
120054924
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
snh04090
]
120054924
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120054924
Protein kinases [BR:
snh01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120054924
CD molecules [BR:
snh04090
]
Proteins
120054924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
C2-set_2
V-set
VEGFR1-3_N_Ig-like
C1-set
Tlr3_TMD
Motif
Other DBs
NCBI-GeneID:
120054924
NCBI-ProteinID:
XP_038858591
UniProt:
A0A8U1BJW7
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All DBs
Position
Sna10:28201226..28249702
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AA seq
992 aa
AA seq
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MEYHWVLFSVLLQLSFQTGSARPTITPRGLHLVIPLNIPFSLLCQGDQVVQWKREDRPKL
RGEERTNGSSVLKIPRAQPGHMGRYICLEERTGEQSSIYVYVKDPDNVFRKTIVFSILTR
AGDSASIPCLATDPRVVNLRLESCHGGALPNDLHYAASLERGMVIYDTKKAFEGCYICTG
RLGGALVKSHSYDLTVRPVPDVPPVIELRGPKRVVLTRGQNLTLTCSTTNVNGDIKLKWA
APPGTQPAVENGSRILTEPITHVRSATLQVNSVGTQNSGRYRCEGQNERGISSESIWLDV
YDRGFINLAPSDNSSVRVRAGESLSLHVDMEAYPKPHTFSWSFSGQQLRNTSDHVITKQN
HQHRYNSELRLVRLKMSESGVYTFYASNGDATINQSFTVYVISKPEIVSHDGPVDGQVRC
VAEGYPAPQITWYYCEQPYMRCSHQMNATQEEQDIVTVTLLSPSFGKTEVESRLNITTGR
FHTLECVATVEGEQDFTLFSISERTVPHELFTPLLIGIVSATALLILILIVLFYKYLQKP
KYQIQWKVIEGIHGNNYVYIDPTQLPYDHEWEFPRDKLRFGKTLGSGAFGKVVEATAYGM
SKADTVMTVAVKMLKPSAHATEKEALMSELKVLSYLGNHMNIVNLLGACTVGGPTLVITE
YCCFGDLLNFLRRKRETFFCDTLGEDCYYRNVMLQRETATAXDSRNGYMDMRPSVAGVLP
NGFSSEKRISIRKPGGSSSEPDVVSEMLHEDSLSLDTEDLLSFSYQVAKGMDFLASKNCI
HRDLAARNILLTQGRVAKICDFGLARDITTDSNYVVKGNARLPVKWMSPESIFECVYTFE
SDVWSYGILLWEIFSLGSSPYPGMLVDSKFYKMIKEGYRMDAPEFAPSEMYEIMRSCWDS
NPFKRHSFSKVVERIEQQLSDTTKHIYLNFSSRFPVTMGQQVTSVDQGTQNANILCLNSV
GSSNASTQPLLASASDDIFLGEMATGLRVHQV
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggaataccactgggtactgttttctgtcttgttgcagttatccttccaaacaggtagc
gccagacccaccatcacccccagaggcctccacctggtcattccactcaacatccccttc
agcctgctttgccagggtgaccaggtggtgcagtggaagcgggaggatcgccccaaactg
aggggcgaggagcggactaatgggtcgtccgtcctgaaaattcccagagctcagcctggc
cacatgggccgatacatctgtctggaggagagaaccggagagcagagctctatctacgtc
tacgtcaaagatcctgataatgtctttagaaagaccattgtgttcagtatcctgactcgt
gcgggagacagtgcctccatcccctgcctagcaaccgacccgagagtggtcaacctgcgc
ttggagtcatgccatggcggtgccctccctaatgatctccactatgctgccagcctggag
cggggcatggttatctatgacactaagaaggcctttgagggctgttacatctgcactggc
agactgggcggtgccctcgttaaatcacacagctatgatctgactgtgcgaccagtccca
gatgtgccccctgtgattgagttgcgtgggcccaagagggtggtcctgacgcggggccag
aatctcaccctgacctgcagcaccaccaacgtcaacggagacatcaagctgaagtgggcc
gctccgccgggcacgcaaccggcagtggagaatggctcacgcatcctgactgagcccatc
acacacgtccgcagcgctacactccaagtcaactctgtcgggacacagaattctgggaga
tatcgatgtgagggtcagaatgagagggggatcagctctgagtcaatctggctggacgtc
tatgatagaggtttcatcaacctggctccgtcagataacagttctgtgcgcgtgcgtgct
ggggagagtctgtccctgcatgtggacatggaggcctatcccaaaccacacaccttctcc
tggagcttctcaggccagcagctgaggaacacctctgatcatgtcatcaccaaacagaac
caccaacacaggtacaacagtgagctcaggctggtgcgtttgaaaatgtcagagagtgga
gtctacaccttttatgcctccaatggtgatgcaacaatcaatcagtcatttaccgtctac
gttatcagtaaaccagagattgtatctcatgatggcccagttgatggacaggtgcgatgt
gtagctgagggataccctgccccacagatcacctggtactactgtgaacagccttatatg
aggtgctcccaccagatgaacgccactcaggaggagcaggacattgtcacggtgacgttg
ttgagtccttcctttgggaagacggaggtggagagcaggctgaacatcaccacaggaaga
ttccacacgctggagtgtgtggccaccgtggagggagagcaggacttcacactgttctct
atcagtgaaagaacagttccccatgagctcttcacacctctgctgattggcatagtgtca
gcaaccgccctcctcatcctcatcctcatagtgctcttctacaagtacctgcagaaaccc
aaataccagatccagtggaaagtcattgaaggtatccacggaaacaactacgtgtatatt
gaccctacccagctcccatacgatcacgagtgggagttcccccgggacaaactgcgtttc
gggaaaactctgggctccggagccttcgggaaggtagtggaggctactgcttatggaatg
tccaaagctgatacagtgatgacagtggcggtcaaaatgctcaaacccagtgcccatgcc
actgagaaggaggctctgatgtcagagctgaaagttctcagttacctgggaaaccacatg
aacattgtcaacctgctgggagcctgtactgttggaggcccaaccctggtgatcacagag
tattgctgcttcggtgacctcctcaactttctgagaaggaagagggagacgttcttttgt
gacacgttaggggaggactgctactacaggaatgtcatgctgcagagggagacagctaca
gcttgagacagcaggaatggatacatggatatgaggccttctgtcgctggtgtcctgccc
aatggcttctcctcagagaagagaatctcgatacgcaaaccaggtggttccagtagtgag
cctgatgttgtgagtgagatgctccatgaggacagtctctctctggacactgaggatctg
ctcagcttctcctatcaagtggccaaaggcatggacttcctggcttccaaaaattgcatc
cacagagacctggctgcccggaacattctgctgactcaggggcgagtggcaaagatctgt
gacttcggcctggcccgtgacatcaccacagactccaactatgtagtcaaaggcaatgct
cgcctcccagtcaagtggatgtctccagagagcatctttgaatgtgtgtacacatttgag
agtgacgtatggtcctatggcatcttgctctgggaaatcttctcactcggaagcagtcca
tatcctgggatgcttgtggactcaaagttctacaaaatgattaaggaaggatatagaatg
gatgcaccagagtttgcaccgagtgaaatgtatgagataatgaggtcgtgctgggactcg
aacccctttaagagacactccttcagcaaggtggtggagaggattgaacaacagctgtca
gacaccaccaaacacatctatctgaacttcagctccaggtttccggtcacaatggggcaa
caggttaccagtgtggaccaggggacgcagaatgccaacatcctttgcctcaactctgtg
ggcagcagcaatgcctccactcagcccctattggccagcgccagcgatgacatctttctg
ggggagatggccaccgggctcagggtccaccaggtgtaa
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