Salvelinus namaycush (lake trout): 120054941
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Entry
120054941 CDS
T07522
Name
(RefSeq) carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like
KO
K16513
carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120054941
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
120054941
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4628
PID
Motif
Other DBs
NCBI-GeneID:
120054941
NCBI-ProteinID:
XP_038858635
UniProt:
A0A8U1C1S5
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Position
Sna10:complement(28882008..29083110)
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AA seq
760 aa
AA seq
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MPAKTKYNLVDDGHDLRIPLHNEEAFQHGINFEAKYIGSLDVARPNSRVEIVAAMRRIRY
EFKVKNIKKKKVNIIVSVDGVKVALRKKLKKKEWTWDESKMMVMQDPIYRIFYVSHDSQD
LKIFSYIARDGQSNIFRCNVFKSKKKSQAMRIVRTVGQAFEVCHKLSLQHTHQNADGQED
ANNDKTCNEESTLSARELTGAEKSAVAVETDIDEEDAPLPLPDSTVEEFNRGVTDLDGVG
ATKTDHTHLNNIDNDKKVPEEASLLLASPRMLLPSSGTLPPTTPLSVHHQIQLLQQQLQQ
QQQQTHVAVAQVHLLKDQLSAEATARLEAQARVHQLLLQNKDLLQHISLLVKQIQELEVK
MSGPCSMGSQDSLLEITFRSTVPPVLCDPTTPRPQDHVNLTLPALGINMSMGQDGTAFPL
SSSSLPLGNHLVDQSMFENSNTSRAPGQGLQASRLTHASARRSLVTANPALGSSPAEAPS
STTVAGGQQRLKNALNLGKVVGAKVNDLLRRKEPSLLGDIGVTEVNKNVGAVWSNMEEMT
LGTTANSHTSLDSFPRLDPPPPGKKRLPRALKTTQDMMISSDPVVTTPPETPDHSLLSSP
DKTPLISKEHTPLQGKRDGENDGGRDGFTGLTGPLDSERKEEDEVVEMERNGSSKMDGVE
GDETEKRREPEKTQIQLQLSVPDLIHKDHPDPHRSKTSEPRQKAPGVDTRLASTPLKAPY
RISLSVSEDGLMENGSLCMRGSAVTDTEELEQHPDLLSFE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgaaaacaaagtacaatcttgtggacgatggccatgatttgagaattccattg
cataacgaggaagcattccaacatgggatcaacttcgaagccaagtacatcggcagtctg
gacgtggcgcggccgaacagcagagtggagatcgtagctgctatgagaagaatacggtat
gaattcaaagtgaagaacatcaagaagaagaaggtcaacatcattgtctcagtggatgga
gtgaaggtggcactcagaaaaaagttaaaaaagaaggagtggacgtgggatgagagtaag
atgatggtgatgcaggatcccatttacaggattttctatgtgtctcatgactcccaggac
ctgaagatcttcagctacatcgccagagacggacagagtaacatcttccgttgtaacgtc
ttcaagtccaagaagaagtcccaggccatgcgtatcgtgcggacggtgggccaggcattc
gaggtgtgtcataaactcagcttgcaacacacacaccagaacgcagatggacaggaggac
gcaaacaatgacaagacctgcaacgaggagtccacgctctcagcccgggagttaacggga
gcggagaagtcggcggttgctgtggagacagacatcgatgaggaggatgctcccttacca
ttaccggacagtacggtcgaggagtttaaccgcggcgtcactgacctggacggagtgggt
gctactaagactgaccacacacacctcaacaatattgacaacgacaagaaggttccagag
gaggcctctctgctgcttgcgtcccccaggatgctgctgccgtcatcgggtactctgcct
cccaccacccccctgtcagtccaccaccagatccaactgctacagcaacaactacagcaa
caacagcaacagacacatgtagccgtggcacaggtgcacctgttgaaggaccaactgagt
gcggaggctacagccagactggaggcccaggccagagtgcaccagctgctgctccagaac
aaggacctgctgcagcacatctccctactggtcaaacagatccaggagctggaggtcaaa
atgtcaggaccctgctccatgggttcccaggatagtctgttggagatcactttccgttcc
accgttcccccagttttgtgtgaccctacgaccccgcgaccccaggaccatgtcaacctc
accctgccagcgctgggcatcaacatgagcatgggccaggacgggacggccttccccctc
tcctcctcctccctgcccctaggcaaccacctagttgaccagagtatgtttgagaactcc
aacacctccagagctccaggccaggggctccaggcctccaggttgacccatgcctcggcc
cgtcgctccctggtcactgctaaccctgctctgggtagcagccctgccgaggccccctcc
tccaccactgtcgctggaggtcagcagaggctgaagaacgccctgaacctgggaaaggtg
gtgggggcaaaggtcaatgacctgctgcggaggaaggagcccagtcttctaggagacatt
ggggtcacagaagtcaacaagaacgtaggagcagtctggagcaatatggaggagatgacc
ctggggactactgccaatagtcatacctctctggactccttccctcgtctggacccccct
ccccccggtaagaagcgtcttcctcgtgccctgaagaccacccaggacatgatgatctca
tctgaccctgtcgtcaccactccccctgagacccccgatcactccctcctctcctcccct
gacaagacccccctcattagcaaggagcataccccactccagggaaagagggatggagag
aatgatggagggagagacggattcactggactgactggccctctggacagcgagaggaaa
gaggaggatgaggtggtggagatggagagaaatggaagtagtaagatggatggagtggaa
ggggatgagacggaaaagaggagagagccagagaagacccagattcagctccagctctct
gtcccagacctcatccataaggaccacccggacccccacaggtcgaagacgtctgagccc
aggcagaaggcaccgggagtggacacgaggctggcttccacccctctgaaggctccatac
aggatcagtctgagtgtgagtgaggatgggctgatggagaatggctccctctgtatgaga
ggatcagcagttacagacacagaggagcttgaacaacaccccgacctgctctcctttgag
tag
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