Salvelinus namaycush (lake trout): 120054963
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Entry
120054963 CDS
T07522
Symbol
sec16b
Name
(RefSeq) protein transport protein Sec16B isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120054963 (sec16b)
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120054963 (sec16b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
120054963
NCBI-ProteinID:
XP_038858688
UniProt:
A0A8U1EMG4
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Position
Sna10:33329496..33364195
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AA seq
991 aa
AA seq
DB search
MDPRSYHWNEPGPGRHPQRPREREDYHRPAHPHQGTGTGHYPPAPNVGDAITEHYPPPPD
PRERERQWSHQDPRYRVYLTSPPPSRPPLEFSHSSYSTPHSRTAYDRPHSTMGYIRPEPQ
HSRPHSRQAYDYPPQIYWDHSQDYGYYDQGYYKGHYPDAGQWPPQEQWRSDQYQERRYEQ
DQTGSGYREQQRYDQRRASSQHDFRGSDEDRSKENGDAGGDDCCFAEGALAISKASGLSS
SSYELSQYINGAEQNDPAPQTTWSTADTEYAAIPQVTAPLKYTLPHALVSFGPAGQLIRV
SPGLAMQGDPGKVELHSLEIILGETQEQQDMREFPGPLAREDLHKVDAISFAHQKAEACM
KDEKLQDKGSAALLWNLLVLLCRQNGRIVGSDIAELLMRNSQGHGGSGGSESEAPTLIDL
SEGPSPETDPLDGADLLTGTATSACTAESTEKDMQGYTKLLLAGRKKEALESAMKSGLWG
HALFLASKMDNRSYTTVLNRFTGQLAPNDPLQTLFQMLSGRIPAVSTCCGSDKWRDWEPH
LAVMLSNETGDPIGHQKSIITMGDTLASRGLLHAAHICYLTAYAPFGVYTAKTERLVLLG
NCNSLPFKEFAQNSAIRCTELFEYCQRLGDKFFCIPPFQVYKFLYACRLLDAGLASQAFH
YCEVIGMSLLRLQEPSMVLLGELIKLAERLKQCEGMGQLSDTADDRPGQEPDWLQQLRYR
QQGIQMGSSGCSDTYQSAADGSALAHEESRVYSESDTGDLSARGDDQGLDAKFLSYKAAE
EQQQQHVQPQQINTQPPLPVMASNTQPAVSPVVGGQDHSYYYTDTAQPPPQPSPQHPTLD
CPPSAGEGADPSAGPGMIGVQINAGMMPVAEYGQQYGQHYGQEYDYGDQQAWQQGGHQAT
ITQEGKDSEPDKIQPKQSIKSGWFSGWFKHKPKEEQSEASQDADSADPVPTMETPPTSLF
AFPSTTNIPATNFPTQPASTGINAFSRKAGE
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggaccccagaagttaccactggaacgagccaggccctggtcgtcacccacagagaccc
agggaaagagaggactaccataggcctgctcaccctcaccaggggactggaaccgggcac
tacccaccagcaccaaatgttggggacgctatcactgagcactacccaccaccaccggac
cccagggagagggagaggcagtggtcccaccaggaccctcgctacagggtctacctcacc
agccctcccccttccagaccacctctagagttctcacacagctcttacagcactccccac
tccagaacagcttacgacagaccccattccacgatgggttacatcagaccagagccacaa
cactccagaccccactcaaggcaagcatatgactacccaccccagatttactgggaccat
agtcaggactatggctactatgaccagggctattacaaaggacattacccagatgcaggt
caatggcctccccaggaacagtggagatctgaccagtatcaggagaggagatatgagcag
gaccagactggcagtggctaccgagaacaacaaaggtatgaccagcgaagagcgagctct
cagcatgacttcagaggctctgatgaagatcgttctaaagagaatggggatgctggtgga
gatgactgctgttttgccgaaggggctctggccatctccaaggcctcaggcttgtcctcc
agtagctatgagttgagccagtacatcaacggtgctgaacagaatgaccctgccccacaa
accacctggagcacagcagacacagagtatgcagctattccccaggtgactgcccctctg
aaatacactttgccccatgctctggtcagctttggtccagccggacagttgatccgggtc
agtcctggtctggccatgcagggagacccagggaaggtggaactacacagtctcgagatc
attctgggggaaacacaggagcagcaggacatgagagaatttcctgggccactggctagg
gaagacctgcacaaagtagatgccatctcttttgcccaccagaaggcagaagcctgcatg
aaagatgaaaaactacaagacaagggctctgccgccctcctttggaatctactggtactg
ctgtgcagacagaatggacgtatcgttggttcagacatagcagagctgctgatgaggaac
tctcagggccatggtggttcagggggaagtgaatcagaggcccctacactcatagacctg
agtgagggacccagtcctgagacagaccccttggatggagcagatctgttgacagggaca
gccactagtgcctgtacggctgagtccacagagaaggacatgcagggatacaccaagctt
ctcctggctggacggaagaaggaggccctcgagtcggccatgaagagtggactgtggggc
cacgccctgttcctggccagcaagatggacaacaggtcctataccactgtgttgaacagg
tttacaggccagctagctcccaacgaccccctacagaccctgtttcaaatgctctctgga
aggatccctgctgtttccacgtgctgtggaagtgacaaatggagagactgggagcctcac
ctggccgtcatgctgtccaatgagacgggagatccaatcgggcaccagaagagcatcatt
accatgggagacacgctagcctccagagggctgttacatgctgctcatatctgctatctg
acagcttacgctccttttggcgtctacacagccaagaccgagagactggtgcttctgggc
aactgcaacagtctgccattcaaagagtttgctcagaattctgccattcggtgcacagag
ttattcgagtactgccagagacttggagataaattcttctgtatcccccccttccaggtg
tataagttcctgtatgcgtgtcgtctgctggatgctgggctggcgtcccaggccttccac
tactgtgaggtgatagggatgtctttactcagactgcaggagcccagcatggtgctgctg
ggggagcttatcaagctggcagagcgtctgaagcagtgtgagggaatgggacagctcagt
gacacagctgacgacaggcctggacaggagcctgactggctacagcagctgagatacaga
cagcagggcatacagatggggagcagtggttgtagtgatacataccagtcagcagcagac
gggagtgcattggcccatgaggagagcagagtgtattcagaatcagacaccggtgacctt
tctgcaaggggagatgaccagggactggatgctaaattcctctcctacaaagcagcagaa
gagcaacaacaacagcacgtgcagccacagcagatcaacacccagcctccgctgccggtc
atggcttctaacactcagcctgcagtgtcacctgtggtgggaggccaggaccacagttac
tactacacagacactgcacagcctccgcctcagccttcacctcagcatcctacactggac
tgtcctccttcagcaggggaaggggctgatccttctgctggcccaggcatgataggggtc
caaataaatgctggcatgatgccagtggcagagtatggtcagcagtatggtcagcactat
ggccaggagtatgattatggagatcagcaggcatggcagcagggagggcaccaggccacc
atcacgcaggagggcaaggactcagagccggacaaaatccaaccaaaacagagcatcaag
tcagggtggtttagcggctggttcaaacacaaacccaaagaggagcaaagtgaggcgtct
caggatgcagactcagctgacccagttcccactatggagacgcctcccacttccctattt
gctttcccttccactaccaacatccctgcaaccaattttcctacccagcctgcatctact
ggtatcaacgccttttctcggaaagcgggtgaataa
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