Salvelinus namaycush (lake trout): 120054973
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Entry
120054973 CDS
T07522
Symbol
cyldl
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04217
Necroptosis
snh04622
RIG-I-like receptor signaling pathway
snh04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120054973 (cyldl)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120054973 (cyldl)
04625 C-type lectin receptor signaling pathway
120054973 (cyldl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120054973 (cyldl)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120054973 (cyldl)
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120054973 (cyldl)
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C67
120054973 (cyldl)
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120054973 (cyldl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
120054973
NCBI-ProteinID:
XP_038858700
UniProt:
A0A8U1ES06
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All DBs
Position
10:34848465..34860081
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AA seq
779 aa
AA seq
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MDACDVKMYYIIIEDPGLPTVPKNVGHICYIQESRYMSRLSRSEFPQELPVICMGSSLDS
LLKVNDLKPVTAKEAELLQALGEDSERLKWYLERDALDTALGLTKDAPVTVELDGKWLQG
IVRYVGRMTEPKYPDPIVGTFFGIELQGEDKGKGPTDGTYLSKTLFPCKKDCGIFAPFSR
VKPMVSKPKLVSKCLTFPAAQLATQPSPQQAHHQPLSTGDRVTFFMDEDILHGMVMDLEE
KEGRTLVIISTDRDEKITLPLDSVIKGELLQHEPEPMETDKAIMPMEEVHPLGLGVDSLV
EVTLAIGPGYGTIRWIGTLPGQKGTYAGLELEDGYTGVSNGTFKDHRFFRCLPRQGLFVK
LLSCRPDSRFQGAADIQNERASANVLQERQVVRSPGALPSSPIASEQVERMLIGRMKGIQ
GHINSCYMDSALFSLFSCSSVLDSLLFKSTEPRDAPIQSTLLHDIVNPLRSKGFVEGRHI
MKLRQQLQELGYCHTFTTEEKDPEEFLTLIMHHIFCLDPLLKLSAGGKVQDSYCYQIFLD
NNHSLVLPTVQHLLEHSFHSAGLKLAEVPSCLILQMPRFGKKFKMFQKIIPSLELDITDL
LSEGPQQCVLCGQLAYEECVDCFRDPVFSRTGFKVFCRTCSSQVHSHPERLSHSPSPLQL
PEGYPAPTTLRAPPPAPPRERLELFAVLCIETSHYVSFIKHGPNSTDWIFFDSMADRHGE
RDGFNIPQVEACPEIGMYLVMSPAELANQVPRDMKGVAKRLFCDAYMYLYQSTSISLYR
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatgtgatgtgaagatgtactacatcatcatagaggaccctgggttacccacg
gtgcccaaaaatgttggccacatctgttacatccaggagagcaggtacatgtcaaggctt
agcagatctgaatttcctcaggaattgcctgtcatctgtatgggctccagtttggacagt
ctcctgaaggtaaacgacctaaaaccagtgactgctaaggaggcagagctgctgcaagcc
ctaggagaggactcagagagactgaagtggtatttagagagggatgctttggatacagcc
ctgggtttaactaaggatgcacctgtcactgtggagttggatgggaagtggctgcaggga
attgtacgttacgtcggaaggatgacagagccaaagtacccagaccccatcgtaggaacc
ttctttggcatcgaactacagggagaagacaaaggaaagggaccaacagatgggacatat
ctgtcaaaaaccctattcccctgcaagaaagactgtgggatttttgctccattttccaga
gtgaaacccatggtttccaaacccaaattggtgtccaagtgtctgacctttccagcagcc
cagctggccacgcaaccgtcgccccaacaggcccaccaccagcccctctccacaggagac
agagtcaccttcttcatggacgaggacatcctccatgggatggtgatggatctggaggag
aaggagggcaggaccttagtcatcatctctactgaccgggatgagaagatcaccctaccg
ctggacagcgtcatcaaaggggaactgcttcaacatgagcctgagcctatggaaactgat
aaggccattatgcctatggaggaggttcaccccttggggcttggtgttgactctctagtg
gaggtgactctggctataggacctggctatggaaccatccgctggataggcactttgcct
gggcagaaaggaacctacgctggactggagctggaggatgggtacactggggttagtaat
ggtacctttaaagaccatcggttcttcagatgtcttcctagacaaggtctcttcgtcaag
cttctatcctgccggcctgactcccgcttccagggggcagcagacattcagaatgagagg
gcatcagccaatgtccttcaagagagacaggtggtccgcagccctggggcgctcccctcc
tcccccatcgcctctgagcaggtcgagaggatgctgattggtcgaatgaaggggatccag
ggccatataaactcttgctacatggactccgccctcttcagtctgttctcctgttcctca
gttttggactccctgctgtttaagtcaacagagcctagggatgcccccatccagagtacc
ctgctacatgacatcgtcaacccgctccgcagtaaaggttttgtggaagggagacacatt
atgaagcttcgtcagcagctgcaggagcttggatactgccacacattcaccacagaggag
aaagatccagaagagtttcttaccctcattatgcaccatattttctgtctggatcctctc
ctcaaactgtcagctgggggaaaggtccaggacagttactgttatcaaatcttcctggat
aacaaccacagcctggttctgcctactgtccaacacctgctggaacactccttccacagc
gcaggactcaaactggcagaggtgccatcttgtctgatcctccagatgcctcgctttggg
aagaagttcaagatgtttcagaagatcatcccttcactggagctggacattactgacctc
ctctctgaaggtccccagcagtgtgtgttgtgtggtcagctggcgtatgaggagtgtgtg
gactgcttcagagacccagtcttcagcaggacaggatttaaagtgttctgcaggacctgc
tcctctcaggtacactctcaccccgagcggctgtcccacagcccctcccccctgcagctc
cctgagggttaccccgcccccactaccctccgagccccgccccctgccccacccagagag
agactggagctgtttgcagtgctgtgcatagagaccagtcactatgtctccttcatcaaa
cacggaccaaacagcacagactggatcttctttgacagcatggctgacagacatggagag
agggatggcttcaacattccccaggtggaggcatgtccagagattggcatgtacctggtc
atgtcacccgccgagctggccaaccaggtgcctcgggacatgaagggcgtggctaagcgt
ctgttctgtgatgcctacatgtacctgtaccagagtaccagcatcagcctctaccgctga
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