Salvelinus namaycush (lake trout): 120054976
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Entry
120054976 CDS
T07522
Name
(RefSeq) piwi-like protein 2
KO
K02156
aubergine
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120054976
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120054976
piRNA pathway
120054976
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
Piwi_N
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
120054976
NCBI-ProteinID:
XP_038858710
UniProt:
A0A8U1C1W1
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Position
Sna1:complement(31852423..31880622)
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AA seq
1052 aa
AA seq
DB search
MDPKKPCFPGLPGTTRIPWLQQQAWGRGLRSDEPAIGRARGLMFAADGSAGLGRARGFTT
AGDTLLMQYGRGVPFPVSDPSIGFARGIPMPTSEDGGISRTRGWLLSTADPTVGVARGEP
LLGLGPHPGQATPGQLATQDLPEEMPSLQAEEEVVAKQVDMPTQGQGSSLVSMFRGMGID
PSKTWGRGGLPVGRGAFGAELQPQIAPVGAVAGPGGDRFPEDMMGQGNSFLGRGVPSQMV
GMGRASMPPLGTGRGPTVPPTLPPSPPKEAHMTPGCSQTKGELKMEATCETLHKTGTKGT
PLPIGSNHITIHCRNEAVYQYHVTFTPNVESMGMRFGMMKDHRPTTGEVVAFDGSILYLP
VKMEEVVYLKSVRRTDNQEVDIKVQMTKILPPNSDLCIPFYNVVLRRVMKILGLKLVGRN
HYDPKSAVVLGKHRLQVWPGYSTCIKHTDGGLYLQVDVSHKVLRNDSVLDCMNVIYQQSR
ESFQDECTKELIGSIVITRYNNRTYRIDDIEWGKSPKDTFTMADGSTTTFVEYYSKNYGI
TIKEMDQPMLIHRPKERSKPGGKQVITGEILLLPELSFMTGIPDKMRKDFRAMKDLTMHI
NVSSEQHTHSLKQLLKNINTNPEAQTELSRWGLEISQDILVTTGRILPLETICLQSVSFV
TGADVSWSREVIRDASISCIPMNCWAIFYPRRCAEQAEELVSCFGKVAGPMGLRLDRPIR
VELKDDRTETYVKSIHSQLTSEPNVQLVVCIMTGNRDDLYSAIKKLCCVQSPVPSQAINV
RTISQPQKLRSVAQKILLQMNCKLGGELWTVNVPLKHLMVIGVDVHHDTSKKNRSVMGFV
ASLNSLLTRWYSRVTFQMPNEEIINGFRVCLLAALQKYYEVNHNFPEKIVVYRDGVSDGQ
LKTVELYEIPQLLKCFETFPNYEPKLAFIVVQKRVSTNLYSCSGDRFGTPPPGTVLDHTI
TNREWVDFYLMAHHIRQGCGLPTHYISVYNTANLSPDHLQRLTFKMCHLYWNWPGTIRVP
APCKYAHKLAFLSGQYLHSEPAIQLADKLYFL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaagaagccttgtttcccaggcctccctggtacaacccgcattccttggctg
cagcagcaagcatggggtcgaggactgcggtcagatgaaccagcaataggacgagccaga
ggtcttatgtttgcagcagatgggtctgctggcttaggacgagccaggggtttcaccacc
gctggtgatacactgcttatgcagtacgggagaggagtgcccttcccagtgagcgatccc
tccattggctttgccagggggatacccatgcctacatcagaagatggtgggattagccgc
actagagggtggcttctctcgacagctgatccgaccgtaggtgtggcaagaggggaaccc
cttcttggtttggggcctcaccctggacaagccactccaggtcagctcgcaacgcaagac
ttgcctgaagagatgccaagtctgcaggcagaagaggaagtagtagccaaacaggtggac
atgcccacccaaggccaggggtcgtcgctggtgtccatgttcagaggcatggggatcgat
ccctcaaagacctggggcaggggagggctgccagtggggaggggtgcttttggagcagag
ctccaaccacagatagcccctgttggagcagtcgccggtccgggtggagacagattccct
gaggacatgatgggccaaggtaacagcttccttggccgaggtgtaccatctcagatggtg
ggaatgggacgagcatcgatgccccccttgggtactgggaggggacccactgtgccccct
actctccctccatccccacccaaagaggctcatatgactccaggttgctctcagactaag
ggagaacttaagatggaggccacctgtgaaacattacacaagactggtaccaaaggaacg
ccattgcccataggctcaaaccacatcaccattcactgcaggaatgaggcagtctatcag
taccatgtcactttcactcctaatgtggagtcgatgggtatgcgatttggcatgatgaag
gaccatcgccccaccactggggaggttgttgcttttgacggctcaattctctatctccct
gtgaagatggaagaggtggtttacctaaagagtgtgagacgaactgacaaccaggaggtt
gacatcaaggtccagatgactaagatcctaccacccaactctgacctgtgtatccccttc
tacaacgtggtgctgagaagggtaatgaagatcctgggactgaagcttgtggggcggaat
cattacgatccaaaaagcgcagtcgtacttgggaagcatcggttgcaggtgtggccaggt
tactcaacgtgcataaagcacactgatggaggcctctacctccaggtggatgtgtcccac
aaagtgctgcgaaatgactctgtcctcgactgcatgaacgtgatctaccagcaaagcagg
gagagcttccaggatgagtgcaccaaagagctgatcggcagcattgtcatcacccgatac
aacaaccgcacctaccgcatcgacgacattgagtggggcaagtcccccaaagacaccttc
accatggccgacggctccacgaccactttcgttgagtactacagcaaaaactatggcatc
accataaaagagatggaccaacccatgcttatccatcgacccaaagagaggtccaagcct
gggggaaagcaagtcataaccggcgagatcttgcttctgccagagctctcctttatgact
ggaatccctgacaaaatgagaaaggacttccgcgccatgaaggacttgacgatgcacatc
aatgtgagtagtgagcagcacactcactccctgaagcagctcctgaagaacatcaacacc
aacccagaggcccagacagaactgtcacgctgggggctggagatcagtcaagacatcctg
gtgactacaggaagaattctgcctctggagaccatctgtctgcagtcagtgtcctttgtc
accggagctgatgtcagctggtccagggaggttatcagggatgcttctatcagttgtatc
cccatgaactgctgggccattttctacccgcggcgctgtgctgagcaggccgaggagcta
gtgtcctgctttgggaaggtggccggacctatgggcctgaggctggatcggcccatccgc
gtggagctgaaggacgaccgcaccgagacctacgtcaagagcatccactcccagctcact
agtgagcccaacgtgcagttggtagtgtgcatcatgacaggcaacagagacgacctttac
agtgccatcaagaagctgtgctgcgtccagagtcccgtgccctctcaggccattaacgtc
cggaccatctcccaaccacaaaagctgaggagcgtagcccagaaaatcctgctgcagatg
aactgcaaactgggaggagagctgtggactgtgaacgtccctctgaaacatctgatggtg
attggagtggacgtccatcacgacaccagcaagaagaacagatcagtcatgggctttgtc
gccagcctgaatagcctgctgactaggtggtactccagagtgaccttccagatgcccaac
gaggagatcatcaacgggttcagagtgtgtctgctggctgcactgcagaaatactatgag
gtgaaccataacttcccggagaagattgtggtatatcgggacggagtgtctgacggccag
ctgaagactgtggagctgtatgagatccctcagctgctcaagtgttttgagacgttccct
aactacgagcccaagctggccttcatcgtggtacagaaacgtgtcagcaccaacctgtac
tcctgctccggagaccgctttggaacgcctccgccaggaactgtcctggaccacacaatc
accaacagggaatgggttgacttctacttgatggcgcaccacattcgacagggctgtggc
ctgcctacacactacatctcagtctacaacacagcaaacctctccccagaccacttgcaa
aggctgaccttcaaaatgtgccacctgtactggaattggcccgggactatccgagtgcct
gcgccgtgcaagtatgcccacaaactggccttcctgtcgggccagtacctccactcagag
ccagctatccagctggcagacaagctgtacttcctctga
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