Salvelinus namaycush (lake trout): 120054993
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Entry
120054993 CDS
T07522
Name
(RefSeq) rho GTPase-activating protein SYDE2-like
KO
K20655
Rho GTPase-activating protein SYDE
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120054993
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120054993
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
C2
Motif
Other DBs
NCBI-GeneID:
120054993
NCBI-ProteinID:
XP_038858736
UniProt:
A0A8U1EU30
LinkDB
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Position
Sna10:complement(36015450..36096556)
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AA seq
1821 aa
AA seq
DB search
MADPLRRNLLAKLRGKKSKKGTPAGGYGAATNGGRAGKGKVSQNPDSQTRPVVMFAEVHC
LTDNIMRGNDSYVNGIVVNKVGLDQEQSTVGVVETSEFPQQYEASANMHINTSRGPGDNQ
GSGCSGIRGRVNEELLGVSLQRATQYEGNDRDEMIRIHKQGPGYFSGQLQQGHIGRPHEQ
RKHFVPIPRQYSAGDSIGFGSNSPNNHIIYHRRPDGVVKMTNGHYPASKNNGTNVCFDKD
LKTRVSHGQPDDSCHQTVYNYKADNGQRSINDLKVTANVHPGHNQILKTNVTTNGTQMCP
PGIPCAHHPDSNYTEENIVIRNIESYGSSPEFTGDNIRVTHLQSPTFFPTELEICDVNVA
SHFICAREGTLRHYSLDSEDDDYYDNVILPFYVSESLGPNDRKSSDKIEAIESGKDVPKG
QVISDSAQETDRLRSQLKEAYYLLINTMHDISFDGQVSVNGFIDQASSSSHSRDSMCSRL
SIKHVDSDAWSSGEHSVQQVSDTDSILLCLLSENRGDPSLKNNFICKSLVNLSASRIGPP
LMRSTSDRAIKYRSGAHNAPCVQALGSQSPAVVGACENGDIASRPQAVGASDPFEKQASY
DGGTSSDDLLQDTGEDFKLNESSGSVNSLTGSSDNADTQQGGNSRRDGEMSAWDRGGSAK
PHGVTVNKMQEWMHKGRLLSSEMKQRIAGSMPQPHGTHGGLDSAARSSQGQASSVPGGSK
PAALTTRVHVAIPAAVVPCQSQALHQSALIENVHSSSSDRREVGEGKASELSLWRPPLNT
ITVSKKRNWLQQSSGRPHHTTQDDSQCILGAEEDNGHGHTPLPPPSPSPEYLKAPGPPPS
RPLRLHLPQVSMCHARVGPQPRCVDPAEENDADDEGEIWYNPIPEDEEPELPHIYRPTAI
PQVRLMVPTRPQELQAPQIQSRPSREGGGGWTLEGCSPDLEVVGESLGGGDGGGEGSQQG
NAVHSMEPSVQLHRQMLLTCKPQEEGPSSSSRATAAAEGPDLATPGFSPPSSPNPAKKGS
SLNWSFPDKIKSPRTVRKLSMKMKKLPELSRKLSVKGIPSNNNNTSGNGASVSSQSETRT
QCPKTNSGSEPGSAPPRLSPGGGQGAAASRNVISRYHLDSSVSTQQSYSKKKSSGTSMSA
SKGGYLSDGDSPELVAKSGKHRSSEGKGGKGKEKEKDPATGGGERTGAGGVTGGGGSSKL
HGTELDIDAFRHYAFTEQPKCTQYISGLMSLHFYGAEDLKPPRVDSRDVYCAIQVDSVNK
ARTALLTCRTTFLDMDHTFNIELENAQHLKLVVFSWDPTPKKNRVCCHGTVVLPALFRVT
RSHQLAVKLEPRGLIYVKLNLMEHWQNSLDGGYDGDRERQMFGVEAWRVVERENSGLMVP
LLIEKCITEIEKRGCQVVGLYRLCGSAAVKKELREAFERDSLRVELCENTYPDINVITGV
LKDYLRELPYPLITKHLYEAVLDSMAKRPLRIGAGGCENDLVDTEHTVSLLENLPEVERL
TLRRLLDHLKLVASHHDVNKMTCQNLAVCFGPVLLSQRQEASCHSNRVFIDSEELASALH
FKKHIEVLHYLLQLWPVVDPHGKTSSPVLEHPGPADQPAAPPLRRRKERPQVLNLSDAEM
AGVLRPRPGRLDSPSNRYAGDWSRCGERYLPPPLPQEENDYDDVPSEDMEVTEEGQEGQD
TEKEGGEELRQEGLLDSGQEEGQAEPPTAKQEPPLLQEVMEGPVEKEEEEREAEEERVEE
SDVSSGGQPSDDRVCDDDDDDERILPLHNPKEHTYQAYMKIQDISPVLSNRVNLRDLQES
IDTLIGNLERELNKNNLKVSY
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggaatttattagcaaaacttcgggggaagaaatctaagaaa
gggacgccggctggtggatacggcgctgcgactaatgggggcagagcaggtaaaggaaaa
gtttctcaaaacccagacagccaaactcgtccagtagtaatgttcgcagaggtgcattgt
ctgacagacaacatcatgagaggtaacgatagttacgttaacggcattgtagtaaacaag
gttggattagatcaagagcagagcacggtaggagttgttgagacgagtgagtttccccag
cagtacgaggcttcagctaacatgcacataaacactagccgggggccaggggacaatcag
ggtagcgggtgctccgggattaggggtcgagtaaatgaggaactcttgggggtctcactt
caaagagcaactcagtacgaggggaacgatagagacgagatgatcagaatccataaacaa
gggcccggctacttctctggacaattacaacaaggacacatagggagaccgcacgaacag
agaaaacattttgtccccattccgcgacagtatagcgcaggggattcaatagggtttggg
agcaatagtcctaataatcacattatataccacagaaggccagatggggtagttaaaatg
acaaatggccactatcctgcttcaaagaataatggaacaaatgtctgctttgacaaagat
ctaaagactcgagtaagccacgggcagccagacgactcctgccatcaaactgtgtacaac
tacaaggcagacaacgggcagaggtctataaatgatttaaaggttacggcaaacgtgcat
cctggccacaaccaaatattgaaaacaaatgttacaactaacgggacgcaaatgtgtccg
ccgggtatcccgtgtgcgcatcacccggacagtaattacaccgaggaaaacattgtgatt
agaaacatagagagttacgggagctcgcctgaatttacaggggacaacattagggtgacc
catttgcagagcccgacattcttccccactgaattggagatatgcgacgttaacgtggcc
tcccatttcatatgcgcaagagaaggaacactccgacactactctctagatagcgaggat
gatgattattatgataatgtaattcttcccttttatgtatctgagtcattaggtccaaat
gatagaaaaagctctgataaaatagaagccatagagtcgggaaaagatgttccaaaaggg
caagtcatcagcgacagtgcgcaggagacagacagactacggagccagttgaaagaggcg
tattaccttcttataaacaccatgcatgatattagttttgatggtcaggtcagtgtcaac
ggttttatagatcaggcaagttcctccagtcactctcgggacagcatgtgctcacggttg
tccatcaagcacgtggacagtgatgcttggtcgtcgggagagcacagtgtccaacaggtg
tctgacacagactccatcctgttgtgcctgctgagtgaaaaccgtggggatccaagtctc
aaaaataatttcatttgcaagagcctcgtgaatctatctgctagcaggattggtcctccc
ttaatgcgttccactagtgacagagctatcaaataccgcagtggtgcgcacaatgcgccc
tgcgtccaggccctcggttcccaaagccctgctgttgttggggcctgtgagaatggggat
atagcaagtaggccacaggctgttggagcctctgacccgtttgagaaacaggccagctac
gatggtggcacgagcagcgacgacctgcttcaagacaccggtgaagacttcaagttgaac
gagagtagtggctcggtcaacagcctcactgggtcgtccgacaacgcagacacccagcag
ggtggtaacagcaggcgagatggagagatgagcgcatgggaccggggaggctctgccaag
ccccatggagtcaccgtcaacaagatgcaggagtggatgcacaaaggccgtctgttgtct
tcggagatgaagcagcgcatcgcgggttccatgccccaaccccatggcacccacggtggc
ctggatagtgcagcacggtccagccagggccaggccagctcagttccaggtggatctaaa
ccagcagccctgacgaccagagttcacgtggccatacccgccgcggtggtcccatgccag
agccaggcattgcatcagtcagctctgatagagaatgtccactcctcctcctccgacagg
cgcgaggttggcgagggcaaggccagcgagctgtcactatggagacccccactcaacacc
atcaccgtttccaagaaacgcaactggctccagcagagctctgggaggccacatcacacc
acccaggacgactcccagtgcattctgggagcagaggaggacaatggacatggacacaca
cccctaccccctcctagcccctccccggagtacctaaaagcccccggaccaccgccctct
cggcccctccgcctgcacctaccccaggtaagcatgtgccacgcccgcgttgggccccag
cccaggtgtgtggacccggccgaggagaatgatgcggatgacgagggggagatctggtac
aaccccatccctgaggatgaagaaccagagctgcctcacatttacagacccaccgccatc
ccccaggtcagactgatggtccctacacggccccaggagctccaagccccccagatccag
agcaggcccagccgggaaggggggggcgggtggaccctggaaggctgcagccctgacctg
gaggttgtgggggagagcctgggtggcggagatggaggtggagaggggagtcagcagggg
aatgctgtacattccatggagccgtcggtacagctgcacagacagatgctgctcacatgc
aaacctcaggaggaggggccatccagttccagcagagccacagctgcagcagaaggccct
gacctggccacacccggcttctcgcctccctccagccccaaccctgctaagaagggaagc
tccctcaactggtcattcccggacaagatcaagtccccgcgcaccgtcaggaaactctcc
atgaagatgaagaagcttccggaactcagccgcaagctcagcgtcaaagggatccctagc
aacaacaacaacaccagcggtaacggagccagcgtgagcagccaatcagagacaaggacc
cagtgtcccaaaaccaatagtgggtcagaaccaggctcagctcctcccaggttgtcccca
gggggcgggcagggggcggccgccagccgtaatgtgatctcgagatatcacttggacagc
agtgtgtcgacgcagcaaagttacagcaagaagaagagcagcgggacctccatgtcggct
agcaaggggggctacctcagtgacggggactccccagaactggtggccaagtctgggaag
cacaggtcctcagagggcaagggaggcaaggggaaggagaaagagaaagacccagccact
ggaggaggagagagaacaggagcaggaggagtaacaggaggaggtggcagctccaagctg
cacggcacagaactagacattgacgcgttccgccactacgccttcacagaacagcccaag
tgcacccaatacatctcaggcctgatgagcctgcacttctacggcgctgaggacctcaag
ccgccacgtgtcgactcccgggacgtctactgcgccatccaggtggactcggtcaacaag
gcacgcactgccctgctcacctgccggaccaccttcctagacatggaccacaccttcaac
atcgagctggagaacgcccagcacctgaagctagtggtgttcagctgggaccccacaccc
aagaagaaccgtgtgtgctgtcatggcactgtggtgctaccggctctcttcagggtgacc
aggagtcatcagctggccgtgaagctggagccacgaggcctgatctacgtgaagctgaac
ctgatggagcattggcagaactccctggacggaggctacgatggggaccgggagcgacag
atgtttggggtggaggcctggagggtagtggagagggagaactcaggactcatggtgccc
ctgctcatcgagaagtgcatcacagagattgagaagagaggctgccaggttgtgggcctc
taccgtctgtgtggttcagctgcagtaaagaaggagcttcgggaggcctttgaaagggac
agcctgcgtgtggagctctgtgaaaacacctaccctgacatcaacgtcatcacaggtgtg
ctgaaggactacctgcgtgagttgccgtaccccctcatcactaagcacctgtatgaggct
gtgttagactccatggctaagagacctctgcgtattggagcaggaggatgtgagaacgac
ctggtggacacagaacacactgtcagcctgctggagaacctgccagaggtggagaggttg
accctgcggaggctgctggaccacctgaagctggtggcgtcgcaccacgacgtcaacaag
atgacgtgtcagaacctggcagtgtgcttcggccccgtgctgctcagccaacgccaggag
gccagctgccatagcaaccgcgtcttcattgactcagaagagctggccagtgccctgcac
tttaagaagcacatcgaggtgctgcactaccttctgcagctatggccagtggtggaccca
catggcaagacctcatcccccgtcctggagcaccccggcccagccgaccagcctgccgct
ccgcccctgcgtcggaggaaggagcgtccccaggtgctgaacttgagtgatgcagagatg
gccggggtgctgcgacctaggccgggccgactggacagccctagcaaccgttacgctggt
gactggagtcgctgtggagagcgctacctcccccctcctctgccccaggaagaaaatgac
tatgatgatgttccttctgaggatatggaggtcactgaggagggacaggaaggacaggac
acggagaaggaggggggagaggagctgagacaggaaggattactggacagtggacaggag
gaaggacaggcagagccacctacagcaaaacaggaacccccactactccaggaggtgatg
gagggacctgtagagaaggaggaagaggagagagaagcagaggaggagagagtggaggag
agcgatgtttccagtggcggtcagccgtcagacgatagggtgtgtgatgatgatgatgat
gatgagcgcatcctgcccctccacaaccccaaagagcatacataccaggcttacatgaag
atccaggacatcagccccgttctcagcaacagggtcaacctgcgagacctgcaggagagc
atcgacacgctcataggcaacctggagagagagctcaacaagaacaatctcaaagttagc
tactga
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